RNA–Protein interactions for RNA: ENST00000512881.5

RFC1-215, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-215ENST00000512881 ATP2B3Q16720 1220 aa8.52□□□□□ -1.05
RFC1-215ENST00000512881 NOM1Q5C9Z4 860 aaKnown RBP8.52□□□□□ -1.05
RFC1-215ENST00000512881 HHIPL2Q6UWX4 724 aa8.52□□□□□ -1.05
RFC1-215ENST00000512881 SEMA6BQ9H3T3 888 aa8.52□□□□□ -1.05
RFC1-215ENST00000512881 ELP3Q9H9T3 547 aa8.52□□□□□ -1.05
RFC1-215ENST00000512881 COPRSQ9NQ92 184 aa8.52□□□□□ -1.05
RFC1-215ENST00000512881 GNL3LQ9NVN8 582 aaKnown RBP8.52□□□□□ -1.05
RFC1-215ENST00000512881 PA2G4Q9UQ80 394 aaKnown RBP8.52□□□□□ -1.05
RFC1-215ENST00000512881 SSC5DA1L4H1 1573 aa8.52□□□□□ -1.05
RFC1-215ENST00000512881 IGF2BP3O00425 579 aaKnown RBP eCLIP8.51□□□□□ -1.05
RFC1-215ENST00000512881 FKTNO75072 461 aa8.51□□□□□ -1.05
RFC1-215ENST00000512881 DEAF1O75398 565 aaPredicted RBP8.51□□□□□ -1.05
RFC1-215ENST00000512881 BCAR3O75815 825 aa8.51□□□□□ -1.05
RFC1-215ENST00000512881 PKN2Q16513 984 aaKnown RBP8.51□□□□□ -1.05
RFC1-215ENST00000512881 FKBP1CQ5VVH2 108 aa8.51□□□□□ -1.05
RFC1-215ENST00000512881 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.51□□□□□ -1.05
RFC1-215ENST00000512881 FAM83AQ86UY5 434 aa8.51□□□□□ -1.05
RFC1-215ENST00000512881 FBXO11Q86XK2 927 aa8.51□□□□□ -1.05
RFC1-215ENST00000512881 GPR152Q8TDT2 470 aa8.51□□□□□ -1.05
RFC1-215ENST00000512881 PIK3R5Q8WYR1 880 aa8.51□□□□□ -1.05
RFC1-215ENST00000512881 FAM13BQ9NYF5 915 aa8.51□□□□□ -1.05
RFC1-215ENST00000512881 TMOD2Q9NZR1 351 aa8.51□□□□□ -1.05
RFC1-215ENST00000512881 MAST3O60307 1309 aa8.51□□□□□ -1.05
RFC1-215ENST00000512881 ZNF646O15015 1829 aaPredicted RBP8.5□□□□□ -1.05
RFC1-215ENST00000512881 SRGAP3O43295 1099 aa8.5□□□□□ -1.05
RFC1-215ENST00000512881 DYRK3O43781 588 aa8.5□□□□□ -1.05
RFC1-215ENST00000512881 TRIM27P14373 513 aa8.5□□□□□ -1.05
RFC1-215ENST00000512881 ADORA1P30542 326 aa8.5□□□□□ -1.05
RFC1-215ENST00000512881 PHKA1P46020 1223 aa8.5□□□□□ -1.05
RFC1-215ENST00000512881 TIMM10P62072 90 aa8.5□□□□□ -1.05
RFC1-215ENST00000512881 NRG1Q02297 640 aaPredicted RBP8.5□□□□□ -1.05
RFC1-215ENST00000512881 OTUD7BQ6GQQ9 843 aa8.5□□□□□ -1.05
RFC1-215ENST00000512881 ATF7IPQ6VMQ6 1270 aa8.5□□□□□ -1.05
RFC1-215ENST00000512881 OR13H1Q8NG92 308 aa8.5□□□□□ -1.05
RFC1-215ENST00000512881 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.5□□□□□ -1.05
RFC1-215ENST00000512881 FRAT1Q92837 279 aaPredicted RBP8.5□□□□□ -1.05
RFC1-215ENST00000512881 OPTNQ96CV9 577 aa8.5□□□□□ -1.05
RFC1-215ENST00000512881 PTPN18Q99952 460 aa8.5□□□□□ -1.05
RFC1-215ENST00000512881 DENND2AQ9ULE3 1009 aa8.5□□□□□ -1.05
RFC1-215ENST00000512881 CASP8AP2Q9UKL3 1982 aa8.5□□□□□ -1.05
RFC1-215ENST00000512881 GHRHP01286 108 aa8.49□□□□□ -1.05
RFC1-215ENST00000512881 GNAI2P04899 355 aa8.49□□□□□ -1.05
RFC1-215ENST00000512881 LDHBP07195 334 aaKnown RBP8.49□□□□□ -1.05
RFC1-215ENST00000512881 PRDX5P30044 214 aa8.49□□□□□ -1.05
RFC1-215ENST00000512881 SCNN1AP37088 669 aa8.49□□□□□ -1.05
RFC1-215ENST00000512881 TFCP2Q12800 502 aa8.49□□□□□ -1.05
RFC1-215ENST00000512881 MTX1Q13505 466 aa8.49□□□□□ -1.05
RFC1-215ENST00000512881 VGLL4Q14135 290 aa8.49□□□□□ -1.05
RFC1-215ENST00000512881 CDC42EP5Q6NZY7 148 aa8.49□□□□□ -1.05
RFC1-215ENST00000512881 HELQQ8TDG4 1101 aa8.49□□□□□ -1.05
RFC1-215ENST00000512881 HOOK2Q96ED9 719 aa8.49□□□□□ -1.05
RFC1-215ENST00000512881 SSBP4Q9BWG4 385 aaPredicted RBP8.49□□□□□ -1.05
RFC1-215ENST00000512881 USP40Q9NVE5 1235 aa8.49□□□□□ -1.05
RFC1-215ENST00000512881 TNNQ9UQP3 1299 aa8.49□□□□□ -1.05
RFC1-215ENST00000512881 DAGLAQ9Y4D2 1042 aa8.49□□□□□ -1.05
RFC1-215ENST00000512881 CSADQ9Y600 493 aa8.49□□□□□ -1.05
RFC1-215ENST00000512881 GTF2A2P52657 109 aa8.48□□□□□ -1.05
RFC1-215ENST00000512881 SOX10P56693 466 aa8.48□□□□□ -1.05
RFC1-215ENST00000512881 CRHR2Q13324 411 aa8.48□□□□□ -1.05
RFC1-215ENST00000512881 XP32Q5T750 250 aa8.48□□□□□ -1.05
RFC1-215ENST00000512881 DIEXFQ68CQ4 756 aaKnown RBP8.48□□□□□ -1.05
RFC1-215ENST00000512881 FBXO46Q6PJ61 603 aaPredicted RBP8.48□□□□□ -1.05
RFC1-215ENST00000512881 MIGA2Q7L4E1 593 aa8.48□□□□□ -1.05
RFC1-215ENST00000512881 ATCAYQ86WG3 371 aa8.48□□□□□ -1.05
RFC1-215ENST00000512881 FAM151AQ8WW52 585 aa8.48□□□□□ -1.05
RFC1-215ENST00000512881 BRI3BPQ8WY22 251 aa8.48□□□□□ -1.05
RFC1-215ENST00000512881 ZKSCAN4Q969J2 545 aaPredicted RBP8.48□□□□□ -1.05
RFC1-215ENST00000512881 WRNIP1Q96S55 665 aa8.48□□□□□ -1.05
RFC1-215ENST00000512881 AKAP2Q9Y2D5 859 aa8.48□□□□□ -1.05
RFC1-215ENST00000512881 SALL1Q9NSC2 1324 aa8.48□□□□□ -1.05
RFC1-215ENST00000512881 CCL15-CCL14A0A0B4J2E2 113 aa8.47□□□□□ -1.05
RFC1-215ENST00000512881 A0A1B0GUL7 405 aa8.47□□□□□ -1.05
RFC1-215ENST00000512881 HNRNPUQ00839 825 aaKnown RBP eCLIP8.47□□□□□ -1.05
RFC1-215ENST00000512881 TCP10Q12799 353 aa8.47□□□□□ -1.05
RFC1-215ENST00000512881 NFIAQ12857 509 aa8.47□□□□□ -1.05
RFC1-215ENST00000512881 G3BP1Q13283 466 aaKnown RBP eCLIP8.47□□□□□ -1.05
RFC1-215ENST00000512881 RASGRF1Q13972 1273 aa8.47□□□□□ -1.05
RFC1-215ENST00000512881 CCL15Q16663 113 aa8.47□□□□□ -1.05
RFC1-215ENST00000512881 ZKSCAN2Q63HK3 967 aa8.47□□□□□ -1.05
RFC1-215ENST00000512881 DCAF15Q66K64 600 aa8.47□□□□□ -1.05
RFC1-215ENST00000512881 SPTY2D1Q68D10 685 aaPredicted RBP8.47□□□□□ -1.05
RFC1-215ENST00000512881 GDF6Q6KF10 455 aaPredicted RBP8.47□□□□□ -1.05
RFC1-215ENST00000512881 ERO1BQ86YB8 467 aa8.47□□□□□ -1.05
RFC1-215ENST00000512881 ZFPM1Q8IX07 1006 aa8.47□□□□□ -1.05
RFC1-215ENST00000512881 ZGPATQ8N5A5 531 aaKnown RBP8.47□□□□□ -1.05
RFC1-215ENST00000512881 TMEM57Q8N5G2 664 aa8.47□□□□□ -1.05
RFC1-215ENST00000512881 NEUROD6Q96NK8 337 aa8.47□□□□□ -1.05
RFC1-215ENST00000512881 ZNF341Q9BYN7 854 aa8.47□□□□□ -1.05
RFC1-215ENST00000512881 TRIM33Q9UPN9 1127 aa8.47□□□□□ -1.05
RFC1-215ENST00000512881 SNCAIPQ9Y6H5 919 aa8.47□□□□□ -1.05
RFC1-215ENST00000512881 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.47□□□□□ -1.05
RFC1-215ENST00000512881 TNRC18O15417 2968 aaPredicted RBP8.46□□□□□ -1.05
RFC1-215ENST00000512881 PNMA6EA0A0J9YXQ4 647 aa8.46□□□□□ -1.06
RFC1-215ENST00000512881 KIF4AO95239 1232 aa8.46□□□□□ -1.06
RFC1-215ENST00000512881 CETPP11597 493 aa8.46□□□□□ -1.06
RFC1-215ENST00000512881 SP3Q02447 781 aa8.46□□□□□ -1.06
RFC1-215ENST00000512881 MVPQ14764 893 aaKnown RBP8.46□□□□□ -1.06
RFC1-215ENST00000512881 GORABQ5T7V8 394 aa8.46□□□□□ -1.06
RFC1-215ENST00000512881 OTOP1Q7RTM1 612 aa8.46□□□□□ -1.06
RFC1-215ENST00000512881 FAM43AQ8N2R8 423 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms