RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 GOLGA8QA0A0J9YX86 632 aa9.71□□□□□ -0.85
VCAN-208ENST00000512590 GOLGA8OA6NCC3 632 aa9.71□□□□□ -0.85
VCAN-208ENST00000512590 GOLGA8NF8WBI6 632 aa9.71□□□□□ -0.85
VCAN-208ENST00000512590 CHEK2O96017 543 aa9.71□□□□□ -0.85
VCAN-208ENST00000512590 TBC1D8BQ0IIM8 1120 aa9.71□□□□□ -0.85
VCAN-208ENST00000512590 LBRQ14739 615 aaKnown RBP9.71□□□□□ -0.85
VCAN-208ENST00000512590 STXBP2Q15833 593 aa9.71□□□□□ -0.85
VCAN-208ENST00000512590 MAP3K21Q5TCX8 1036 aa9.71□□□□□ -0.85
VCAN-208ENST00000512590 LRRC31Q6UY01 552 aa9.71□□□□□ -0.85
VCAN-208ENST00000512590 DNAAF3Q8N9W5 541 aa9.71□□□□□ -0.85
VCAN-208ENST00000512590 ABI2Q9NYB9 513 aaPredicted RBP9.71□□□□□ -0.85
VCAN-208ENST00000512590 LUC7L2Q9Y383 392 aaKnown RBP9.71□□□□□ -0.85
VCAN-208ENST00000512590 IFNB1P01574 187 aa9.71□□□□□ -0.85
VCAN-208ENST00000512590 KPNA2P52292 529 aaKnown RBP9.71□□□□□ -0.85
VCAN-208ENST00000512590 APBA1Q02410 837 aa9.71□□□□□ -0.85
VCAN-208ENST00000512590 GLE1Q53GS7 698 aaKnown RBP9.71□□□□□ -0.85
VCAN-208ENST00000512590 PLA2G4DQ86XP0 818 aa9.71□□□□□ -0.85
VCAN-208ENST00000512590 AOPEPQ8N6M6 819 aa9.71□□□□□ -0.85
VCAN-208ENST00000512590 SMARCAD1Q9H4L7 1026 aa9.71□□□□□ -0.85
VCAN-208ENST00000512590 ECT2Q9H8V3 914 aa9.71□□□□□ -0.85
VCAN-208ENST00000512590 AFF4Q9UHB7 1163 aaKnown RBP9.71□□□□□ -0.85
VCAN-208ENST00000512590 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.71□□□□□ -0.85
VCAN-208ENST00000512590 UBN2Q6ZU65 1347 aa9.71□□□□□ -0.86
VCAN-208ENST00000512590 DYRK3O43781 588 aa9.71□□□□□ -0.86
VCAN-208ENST00000512590 RRM2BQ7LG56 351 aa9.71□□□□□ -0.86
VCAN-208ENST00000512590 RABGGTAQ92696 567 aa9.71□□□□□ -0.86
VCAN-208ENST00000512590 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.71□□□□□ -0.86
VCAN-208ENST00000512590 AATKQ6ZMQ8 1374 aa9.71□□□□□ -0.86
VCAN-208ENST00000512590 GRM8O00222 908 aa9.71□□□□□ -0.86
VCAN-208ENST00000512590 DNAJC6O75061 913 aa9.71□□□□□ -0.86
VCAN-208ENST00000512590 SLFN14P0C7P3 912 aa9.71□□□□□ -0.86
VCAN-208ENST00000512590 SYTL3Q4VX76 610 aa9.71□□□□□ -0.86
VCAN-208ENST00000512590 RC3H1Q5TC82 1133 aaKnown RBP9.71□□□□□ -0.86
VCAN-208ENST00000512590 ALKBH2Q6NS38 261 aa9.71□□□□□ -0.86
VCAN-208ENST00000512590 RSBN1LQ6PCB5 846 aaPredicted RBP9.71□□□□□ -0.86
VCAN-208ENST00000512590 NELFCDQ8IXH7 590 aa9.71□□□□□ -0.86
VCAN-208ENST00000512590 CCDC105Q8IYK2 499 aa9.71□□□□□ -0.86
VCAN-208ENST00000512590 CENPSQ8N2Z9 138 aa9.71□□□□□ -0.86
VCAN-208ENST00000512590 DCUN1D1Q96GG9 259 aa9.71□□□□□ -0.86
VCAN-208ENST00000512590 GDAP1L1Q96MZ0 367 aa9.71□□□□□ -0.86
VCAN-208ENST00000512590 AMNQ9BXJ7 453 aa9.71□□□□□ -0.86
VCAN-208ENST00000512590 GUCA1BQ9UMX6 200 aa9.71□□□□□ -0.86
VCAN-208ENST00000512590 FPGT-TNNI3KV9GXZ4 949 aa9.71□□□□□ -0.86
VCAN-208ENST00000512590 PRRG1O14668 218 aa9.71□□□□□ -0.86
VCAN-208ENST00000512590 HLA-DPA1P20036 260 aa9.71□□□□□ -0.86
VCAN-208ENST00000512590 YY1P25490 414 aa9.71□□□□□ -0.86
VCAN-208ENST00000512590 MARK3P27448 753 aa9.71□□□□□ -0.86
VCAN-208ENST00000512590 ATP11AP98196 1134 aa9.71□□□□□ -0.86
VCAN-208ENST00000512590 KCNA1Q09470 495 aa9.71□□□□□ -0.86
VCAN-208ENST00000512590 FOXR1Q6PIV2 292 aa9.71□□□□□ -0.86
VCAN-208ENST00000512590 FBXO18Q8NFZ0 1043 aa9.71□□□□□ -0.86
VCAN-208ENST00000512590 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.71□□□□□ -0.86
VCAN-208ENST00000512590 PHF21AQ96BD5 680 aa9.71□□□□□ -0.86
VCAN-208ENST00000512590 SENP2Q9HC62 589 aa9.71□□□□□ -0.86
VCAN-208ENST00000512590 ZC4H2Q9NQZ6 224 aa9.71□□□□□ -0.86
VCAN-208ENST00000512590 RTL1A6NKG5 1358 aa9.7□□□□□ -0.86
VCAN-208ENST00000512590 FANCIQ9NVI1 1328 aa9.7□□□□□ -0.86
VCAN-208ENST00000512590 TMEM232C9JQI7 657 aa9.7□□□□□ -0.86
VCAN-208ENST00000512590 PDE6CP51160 858 aa9.7□□□□□ -0.86
VCAN-208ENST00000512590 BRINP3Q76B58 766 aa9.7□□□□□ -0.86
VCAN-208ENST00000512590 ZBTB18Q99592 522 aa9.7□□□□□ -0.86
VCAN-208ENST00000512590 CUEDC2Q9H467 287 aa9.7□□□□□ -0.86
VCAN-208ENST00000512590 SNX30Q5VWJ9 437 aa9.7□□□□□ -0.86
VCAN-208ENST00000512590 TSSK1BQ9BXA7 367 aa9.7□□□□□ -0.86
VCAN-208ENST00000512590 CTNND2Q9UQB3 1225 aa9.7□□□□□ -0.86
VCAN-208ENST00000512590 IPO5O00410 1097 aaKnown RBP9.7□□□□□ -0.86
VCAN-208ENST00000512590 SNX2O60749 519 aa9.7□□□□□ -0.86
VCAN-208ENST00000512590 AMPD2Q01433 879 aa9.7□□□□□ -0.86
VCAN-208ENST00000512590 Q6ZUG5 572 aa9.7□□□□□ -0.86
VCAN-208ENST00000512590 OTULINQ96BN8 352 aa9.7□□□□□ -0.86
VCAN-208ENST00000512590 FOPNLQ96NB1 174 aa9.7□□□□□ -0.86
VCAN-208ENST00000512590 GAS2L1Q99501 681 aaPredicted RBP9.7□□□□□ -0.86
VCAN-208ENST00000512590 TSEN34Q9BSV6 310 aaKnown RBP9.7□□□□□ -0.86
VCAN-208ENST00000512590 FIS1Q9Y3D6 152 aa9.7□□□□□ -0.86
VCAN-208ENST00000512590 FRMPD2Q68DX3 1309 aaPredicted RBP9.7□□□□□ -0.86
VCAN-208ENST00000512590 WIZO95785 1651 aa9.7□□□□□ -0.86
VCAN-208ENST00000512590 ANP32DO95626 131 aa9.7□□□□□ -0.86
VCAN-208ENST00000512590 RXRAP19793 462 aa9.7□□□□□ -0.86
VCAN-208ENST00000512590 MX2P20592 715 aa9.7□□□□□ -0.86
VCAN-208ENST00000512590 PRR23CQ6ZRP0 262 aa9.7□□□□□ -0.86
VCAN-208ENST00000512590 DYMQ7RTS9 669 aa9.7□□□□□ -0.86
VCAN-208ENST00000512590 SLC26A7Q8TE54 656 aa9.7□□□□□ -0.86
VCAN-208ENST00000512590 TRIM62Q9BVG3 475 aa9.7□□□□□ -0.86
VCAN-208ENST00000512590 MSRAQ9UJ68 235 aa9.7□□□□□ -0.86
VCAN-208ENST00000512590 ZC3H4Q9UPT8 1303 aaKnown RBP9.69□□□□□ -0.86
VCAN-208ENST00000512590 PRR23AA6NEV1 266 aa9.69□□□□□ -0.86
VCAN-208ENST00000512590 EFCAB8A8MWE9 144 aa9.69□□□□□ -0.86
VCAN-208ENST00000512590 POLR2DO15514 142 aaKnown RBP9.69□□□□□ -0.86
VCAN-208ENST00000512590 MYO1DO94832 1006 aa9.69□□□□□ -0.86
VCAN-208ENST00000512590 IMPG1Q17R60 797 aa9.69□□□□□ -0.86
VCAN-208ENST00000512590 MMS22LQ6ZRQ5 1243 aa9.69□□□□□ -0.86
VCAN-208ENST00000512590 STX19Q8N4C7 294 aa9.69□□□□□ -0.86
VCAN-208ENST00000512590 GRPEL1Q9HAV7 217 aa9.69□□□□□ -0.86
VCAN-208ENST00000512590 KRT7P08729 469 aa9.69□□□□□ -0.86
VCAN-208ENST00000512590 VAV2P52735 878 aa9.69□□□□□ -0.86
VCAN-208ENST00000512590 OCRLQ01968 901 aa9.69□□□□□ -0.86
VCAN-208ENST00000512590 GRIN1Q05586 938 aa9.69□□□□□ -0.86
VCAN-208ENST00000512590 CAPRIN1Q14444 709 aaKnown RBP9.69□□□□□ -0.86
VCAN-208ENST00000512590 SIX5Q8N196 739 aa9.69□□□□□ -0.86
VCAN-208ENST00000512590 TAB3Q8N5C8 712 aaPredicted RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms