RNA–Protein interactions for RNA: ENST00000512452.1

DEPDC1B-206, Transcript of DEP domain containing 1B, humanhuman

TSL 2

Gene DEPDC1B, Length 661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-206ENST00000512452 C11orf57Q6ZUT1 292 aaPredicted RBP14.89□□□□□ -0.03
DEPDC1B-206ENST00000512452 C4orf32Q8N8J7 132 aa14.89□□□□□ -0.03
DEPDC1B-206ENST00000512452 GMCL1Q96IK5 515 aa14.89□□□□□ -0.03
DEPDC1B-206ENST00000512452 ZBED3Q96IU2 234 aaPredicted RBP14.89□□□□□ -0.03
DEPDC1B-206ENST00000512452 GGA3Q9NZ52 723 aa14.89□□□□□ -0.03
DEPDC1B-206ENST00000512452 MTMR7Q9Y216 660 aa14.89□□□□□ -0.03
DEPDC1B-206ENST00000512452 MYH4Q9Y623 1939 aa14.88□□□□□ -0.03
DEPDC1B-206ENST00000512452 SPTBN5Q9NRC6 3674 aaKnown RBP14.88□□□□□ -0.03
DEPDC1B-206ENST00000512452 IKBKBO14920 756 aa14.88□□□□□ -0.03
DEPDC1B-206ENST00000512452 POLR2DO15514 142 aaKnown RBP14.88□□□□□ -0.03
DEPDC1B-206ENST00000512452 ACTN4O43707 911 aaKnown RBP14.88□□□□□ -0.03
DEPDC1B-206ENST00000512452 PTMAP06454 111 aaKnown RBP14.88□□□□□ -0.03
DEPDC1B-206ENST00000512452 SLFN14P0C7P3 912 aa14.88□□□□□ -0.03
DEPDC1B-206ENST00000512452 EEF2P13639 858 aaKnown RBP14.88□□□□□ -0.03
DEPDC1B-206ENST00000512452 ICA1Q05084 483 aa14.88□□□□□ -0.03
DEPDC1B-206ENST00000512452 POSTNQ15063 836 aa14.88□□□□□ -0.03
DEPDC1B-206ENST00000512452 LRIT3Q3SXY7 679 aa14.88□□□□□ -0.03
DEPDC1B-206ENST00000512452 MCTP2Q6DN12 878 aa14.88□□□□□ -0.03
DEPDC1B-206ENST00000512452 JMJD4Q9H9V9 463 aa14.88□□□□□ -0.03
DEPDC1B-206ENST00000512452 DACH1Q9UI36 760 aa14.88□□□□□ -0.03
DEPDC1B-206ENST00000512452 PTCH2Q9Y6C5 1203 aa14.88□□□□□ -0.03
DEPDC1B-206ENST00000512452 SYNGAP1Q96PV0 1343 aa14.88□□□□□ -0.03
DEPDC1B-206ENST00000512452 ZBTB5O15062 677 aa14.87□□□□□ -0.03
DEPDC1B-206ENST00000512452 SMC2O95347 1197 aa14.87□□□□□ -0.03
DEPDC1B-206ENST00000512452 CLCN1P35523 988 aa14.87□□□□□ -0.03
DEPDC1B-206ENST00000512452 TXLNAP40222 546 aa14.87□□□□□ -0.03
DEPDC1B-206ENST00000512452 ADCY7P51828 1080 aa14.87□□□□□ -0.03
DEPDC1B-206ENST00000512452 GRIN1Q05586 938 aa14.87□□□□□ -0.03
DEPDC1B-206ENST00000512452 CCDC96Q2M329 555 aa14.87□□□□□ -0.03
DEPDC1B-206ENST00000512452 SLFN13Q68D06 897 aa14.87□□□□□ -0.03
DEPDC1B-206ENST00000512452 PLA2G4DQ86XP0 818 aa14.87□□□□□ -0.03
DEPDC1B-206ENST00000512452 HOMER1Q86YM7 354 aa14.87□□□□□ -0.03
DEPDC1B-206ENST00000512452 DHX40Q8IX18 779 aaKnown RBP14.87□□□□□ -0.03
DEPDC1B-206ENST00000512452 ADGRF4Q8IZF3 695 aa14.87□□□□□ -0.03
DEPDC1B-206ENST00000512452 REXO1Q8N1G1 1221 aaKnown RBP14.87□□□□□ -0.03
DEPDC1B-206ENST00000512452 AK8Q96MA6 479 aa14.87□□□□□ -0.03
DEPDC1B-206ENST00000512452 NAP1L4Q99733 375 aaKnown RBP14.87□□□□□ -0.03
DEPDC1B-206ENST00000512452 UBA5Q9GZZ9 404 aa14.87□□□□□ -0.03
DEPDC1B-206ENST00000512452 ZKSCAN5Q9Y2L8 839 aa14.87□□□□□ -0.03
DEPDC1B-206ENST00000512452 FRMPD2Q68DX3 1309 aaPredicted RBP14.87□□□□□ -0.03
DEPDC1B-206ENST00000512452 BAZ2BQ9UIF8 2168 aaKnown RBP14.86□□□□□ -0.03
DEPDC1B-206ENST00000512452 WNT7AO00755 349 aa14.86□□□□□ -0.03
DEPDC1B-206ENST00000512452 MSNP26038 577 aaKnown RBP14.86□□□□□ -0.03
DEPDC1B-206ENST00000512452 MCM7P33993 719 aa14.86□□□□□ -0.03
DEPDC1B-206ENST00000512452 BMP8BP34820 402 aa14.86□□□□□ -0.03
DEPDC1B-206ENST00000512452 SARSP49591 514 aaKnown RBP14.86□□□□□ -0.03
DEPDC1B-206ENST00000512452 ZNF75DP51815 510 aa14.86□□□□□ -0.03
DEPDC1B-206ENST00000512452 ZNF280AP59817 542 aaPredicted RBP14.86□□□□□ -0.03
DEPDC1B-206ENST00000512452 TRAF1Q13077 416 aa14.86□□□□□ -0.03
DEPDC1B-206ENST00000512452 SEMA3FQ13275 785 aa14.86□□□□□ -0.03
DEPDC1B-206ENST00000512452 SEPT2Q15019 361 aa14.86□□□□□ -0.03
DEPDC1B-206ENST00000512452 DPCR1Q3MIW9 517 aa14.86□□□□□ -0.03
DEPDC1B-206ENST00000512452 DTHD1Q6ZMT9 781 aa14.86□□□□□ -0.03
DEPDC1B-206ENST00000512452 SH3RF1Q7Z6J0 888 aa14.86□□□□□ -0.03
DEPDC1B-206ENST00000512452 NEK8Q86SG6 692 aa14.86□□□□□ -0.03
DEPDC1B-206ENST00000512452 IQUBQ8NA54 791 aa14.86□□□□□ -0.03
DEPDC1B-206ENST00000512452 MLKLQ8NB16 471 aa14.86□□□□□ -0.03
DEPDC1B-206ENST00000512452 SPATA20Q8TB22 786 aa14.86□□□□□ -0.03
DEPDC1B-206ENST00000512452 SMARCE1Q969G3 411 aa14.86□□□□□ -0.03
DEPDC1B-206ENST00000512452 MRFAP1L1Q96HT8 127 aa14.86□□□□□ -0.03
DEPDC1B-206ENST00000512452 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.86□□□□□ -0.03
DEPDC1B-206ENST00000512452 GPCPD1Q9NPB8 672 aa14.86□□□□□ -0.03
DEPDC1B-206ENST00000512452 RIC8AQ9NPQ8 531 aa14.86□□□□□ -0.03
DEPDC1B-206ENST00000512452 SERTAD1Q9UHV2 236 aa14.86□□□□□ -0.03
DEPDC1B-206ENST00000512452 VWA3AA6NCI4 1184 aa14.85□□□□□ -0.03
DEPDC1B-206ENST00000512452 AP5Z1O43299 807 aa14.85□□□□□ -0.03
DEPDC1B-206ENST00000512452 EVI5O60447 810 aa14.85□□□□□ -0.03
DEPDC1B-206ENST00000512452 SLC1A4P43007 532 aa14.85□□□□□ -0.03
DEPDC1B-206ENST00000512452 TNNI2P48788 182 aa14.85□□□□□ -0.03
DEPDC1B-206ENST00000512452 MRPL12P52815 198 aaKnown RBP14.85□□□□□ -0.03
DEPDC1B-206ENST00000512452 CAP1Q01518 475 aa14.85□□□□□ -0.03
DEPDC1B-206ENST00000512452 ATP2B2Q01814 1243 aa14.85□□□□□ -0.03
DEPDC1B-206ENST00000512452 SP3Q02447 781 aa14.85□□□□□ -0.03
DEPDC1B-206ENST00000512452 MAP3K10Q02779 954 aa14.85□□□□□ -0.03
DEPDC1B-206ENST00000512452 PNOCQ13519 176 aa14.85□□□□□ -0.03
DEPDC1B-206ENST00000512452 TTLL12Q14166 644 aaPredicted RBP14.85□□□□□ -0.03
DEPDC1B-206ENST00000512452 INF2Q27J81 1249 aa14.85□□□□□ -0.03
DEPDC1B-206ENST00000512452 KIF4BQ2VIQ3 1234 aa14.85□□□□□ -0.03
DEPDC1B-206ENST00000512452 BTNL9Q6UXG8 535 aa14.85□□□□□ -0.03
DEPDC1B-206ENST00000512452 RASGRP2Q7LDG7 609 aa14.85□□□□□ -0.03
DEPDC1B-206ENST00000512452 IFNL1Q8IU54 200 aa14.85□□□□□ -0.03
DEPDC1B-206ENST00000512452 CLEC10AQ8IUN9 316 aa14.85□□□□□ -0.03
DEPDC1B-206ENST00000512452 SIAH1Q8IUQ4 282 aa14.85□□□□□ -0.03
DEPDC1B-206ENST00000512452 GUCD1Q96NT3 240 aa14.85□□□□□ -0.03
DEPDC1B-206ENST00000512452 CCSER1Q9C0I3 900 aa14.85□□□□□ -0.03
DEPDC1B-206ENST00000512452 CPVLQ9H3G5 476 aa14.85□□□□□ -0.03
DEPDC1B-206ENST00000512452 VAT1LQ9HCJ6 419 aa14.85□□□□□ -0.03
DEPDC1B-206ENST00000512452 GINM1Q9NU53 330 aa14.85□□□□□ -0.03
DEPDC1B-206ENST00000512452 PCDHA5Q9Y5H7 936 aa14.85□□□□□ -0.03
DEPDC1B-206ENST00000512452 ASTN2O75129 1339 aaPredicted RBP14.85□□□□□ -0.03
DEPDC1B-206ENST00000512452 TCP10L2B9ZVM9 353 aa14.84□□□□□ -0.03
DEPDC1B-206ENST00000512452 ADAMTS3O15072 1205 aa14.84□□□□□ -0.03
DEPDC1B-206ENST00000512452 INHBEP58166 350 aa14.84□□□□□ -0.03
DEPDC1B-206ENST00000512452 PLCB2Q00722 1185 aa14.84□□□□□ -0.03
DEPDC1B-206ENST00000512452 DHX8Q14562 1220 aaKnown RBP14.84□□□□□ -0.03
DEPDC1B-206ENST00000512452 SPECC1Q5M775 1068 aa14.84□□□□□ -0.03
DEPDC1B-206ENST00000512452 UBE2Q1Q7Z7E8 422 aa14.84□□□□□ -0.03
DEPDC1B-206ENST00000512452 AOPEPQ8N6M6 819 aa14.84□□□□□ -0.03
DEPDC1B-206ENST00000512452 RASGRP4Q8TDF6 673 aa14.84□□□□□ -0.03
DEPDC1B-206ENST00000512452 CUL5Q93034 780 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms