RNA–Protein interactions for RNA: ENST00000512385.5

SNCAIP-217, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,564 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-217ENST00000512385 GBP3Q9H0R5 595 aa15.5■□□□□ 0.07
SNCAIP-217ENST00000512385 USP40Q9NVE5 1235 aa15.5■□□□□ 0.07
SNCAIP-217ENST00000512385 PSMD14O00487 310 aa15.5■□□□□ 0.07
SNCAIP-217ENST00000512385 MMP1P03956 469 aa15.5■□□□□ 0.07
SNCAIP-217ENST00000512385 ERCC5P28715 1186 aaPredicted RBP15.5■□□□□ 0.07
SNCAIP-217ENST00000512385 PRELPP51888 382 aa15.5■□□□□ 0.07
SNCAIP-217ENST00000512385 MNAT1P51948 309 aa15.5■□□□□ 0.07
SNCAIP-217ENST00000512385 C2orf54Q08AI8 447 aa15.5■□□□□ 0.07
SNCAIP-217ENST00000512385 CPLX2Q6PUV4 134 aaKnown RBP15.5■□□□□ 0.07
SNCAIP-217ENST00000512385 COG1Q8WTW3 980 aa15.5■□□□□ 0.07
SNCAIP-217ENST00000512385 SHISA4Q96DD7 197 aa15.5■□□□□ 0.07
SNCAIP-217ENST00000512385 PAGE5Q96GU1 130 aa15.5■□□□□ 0.07
SNCAIP-217ENST00000512385 SELENOOQ9BVL4 669 aa15.5■□□□□ 0.07
SNCAIP-217ENST00000512385 BRMS1Q9HCU9 246 aa15.5■□□□□ 0.07
SNCAIP-217ENST00000512385 TNKSO95271 1327 aa15.49■□□□□ 0.07
SNCAIP-217ENST00000512385 A0A087WUV0 522 aaPredicted RBP15.49■□□□□ 0.07
SNCAIP-217ENST00000512385 RCCD1A6NED2 376 aa15.49■□□□□ 0.07
SNCAIP-217ENST00000512385 CDKL5O76039 1030 aa15.49■□□□□ 0.07
SNCAIP-217ENST00000512385 CRKP46108 304 aa15.49■□□□□ 0.07
SNCAIP-217ENST00000512385 GSTO1P78417 241 aa15.49■□□□□ 0.07
SNCAIP-217ENST00000512385 DALRD3Q5D0E6 543 aaKnown RBP15.49■□□□□ 0.07
SNCAIP-217ENST00000512385 CDC42EP5Q6NZY7 148 aa15.49■□□□□ 0.07
SNCAIP-217ENST00000512385 TRAPPC11Q7Z392 1133 aa15.49■□□□□ 0.07
SNCAIP-217ENST00000512385 CNGA4Q8IV77 575 aa15.49■□□□□ 0.07
SNCAIP-217ENST00000512385 SPATA20Q8TB22 786 aa15.49■□□□□ 0.07
SNCAIP-217ENST00000512385 BCAS4Q8TDM0 211 aa15.49■□□□□ 0.07
SNCAIP-217ENST00000512385 SECISBP2LQ93073 1101 aaKnown RBP15.49■□□□□ 0.07
SNCAIP-217ENST00000512385 ATP8A2Q9NTI2 1148 aa15.49■□□□□ 0.07
SNCAIP-217ENST00000512385 SMARCAL1Q9NZC9 954 aa15.49■□□□□ 0.07
SNCAIP-217ENST00000512385 VPS54Q9P1Q0 977 aa15.49■□□□□ 0.07
SNCAIP-217ENST00000512385 SLC12A7Q9Y666 1083 aa15.49■□□□□ 0.07
SNCAIP-217ENST00000512385 HNRNPH1P31943 449 aaKnown RBP15.49■□□□□ 0.07
SNCAIP-217ENST00000512385 AARSP49588 968 aaKnown RBP eCLIP15.49■□□□□ 0.07
SNCAIP-217ENST00000512385 C12orf60Q5U649 245 aa15.49■□□□□ 0.07
SNCAIP-217ENST00000512385 ENAHQ8N8S7 591 aaPredicted RBP15.49■□□□□ 0.07
SNCAIP-217ENST00000512385 PSMB7Q99436 277 aa15.49■□□□□ 0.07
SNCAIP-217ENST00000512385 TDRD3Q9H7E2 651 aaKnown RBP15.49■□□□□ 0.07
SNCAIP-217ENST00000512385 LDHCP07864 332 aa15.48■□□□□ 0.07
SNCAIP-217ENST00000512385 MATR3P43243 847 aaKnown RBP eCLIP15.48■□□□□ 0.07
SNCAIP-217ENST00000512385 KCTD19Q17RG1 926 aaPredicted RBP15.48■□□□□ 0.07
SNCAIP-217ENST00000512385 FILIP1LQ4L180 1135 aa15.48■□□□□ 0.07
SNCAIP-217ENST00000512385 TMTC1Q8IUR5 882 aa15.48■□□□□ 0.07
SNCAIP-217ENST00000512385 MSL3Q8N5Y2 521 aaKnown RBP15.48■□□□□ 0.07
SNCAIP-217ENST00000512385 SYMPKQ92797 1274 aaKnown RBP15.48■□□□□ 0.07
SNCAIP-217ENST00000512385 CRACR2AQ9BSW2 395 aa15.48■□□□□ 0.07
SNCAIP-217ENST00000512385 LACRTQ9GZZ8 138 aa15.48■□□□□ 0.07
SNCAIP-217ENST00000512385 EPN1Q9Y6I3 576 aaPredicted RBP15.48■□□□□ 0.07
SNCAIP-217ENST00000512385 CLRN2A0PK11 232 aa15.48■□□□□ 0.07
SNCAIP-217ENST00000512385 GOLGA6CA6NDK9 693 aa15.48■□□□□ 0.07
SNCAIP-217ENST00000512385 NFKBIEO00221 500 aa15.48■□□□□ 0.07
SNCAIP-217ENST00000512385 NDUFA10O95299 355 aa15.48■□□□□ 0.07
SNCAIP-217ENST00000512385 GOLGA6DP0CG33 693 aa15.48■□□□□ 0.07
SNCAIP-217ENST00000512385 PPP4CP60510 307 aa15.48■□□□□ 0.07
SNCAIP-217ENST00000512385 SLC7A5Q01650 507 aa15.48■□□□□ 0.07
SNCAIP-217ENST00000512385 MCTP2Q6DN12 878 aa15.48■□□□□ 0.07
SNCAIP-217ENST00000512385 PRMT6Q96LA8 375 aaPredicted RBP15.48■□□□□ 0.07
SNCAIP-217ENST00000512385 UBAC1Q9BSL1 405 aa15.48■□□□□ 0.07
SNCAIP-217ENST00000512385 KRT23Q9C075 422 aa15.48■□□□□ 0.07
SNCAIP-217ENST00000512385 ACBD3Q9H3P7 528 aa15.48■□□□□ 0.07
SNCAIP-217ENST00000512385 GOLGA6AQ9NYA3 693 aa15.48■□□□□ 0.07
SNCAIP-217ENST00000512385 TTC26A0AVF1 554 aa15.47■□□□□ 0.07
SNCAIP-217ENST00000512385 TSPY2A6NKD2 308 aa15.47■□□□□ 0.07
SNCAIP-217ENST00000512385 MYO1FO00160 1098 aa15.47■□□□□ 0.07
SNCAIP-217ENST00000512385 EIF6P56537 245 aaKnown RBP15.47■□□□□ 0.07
SNCAIP-217ENST00000512385 TFAP4Q01664 338 aa15.47■□□□□ 0.07
SNCAIP-217ENST00000512385 WTAPQ15007 396 aa15.47■□□□□ 0.07
SNCAIP-217ENST00000512385 CCDC122Q5T0U0 273 aa15.47■□□□□ 0.07
SNCAIP-217ENST00000512385 STRIP1Q5VSL9 837 aa15.47■□□□□ 0.07
SNCAIP-217ENST00000512385 CYP26C1Q6V0L0 522 aa15.47■□□□□ 0.07
SNCAIP-217ENST00000512385 FAM76AQ8TAV0 307 aa15.47■□□□□ 0.07
SNCAIP-217ENST00000512385 SMCR8Q8TEV9 937 aaPredicted RBP15.47■□□□□ 0.07
SNCAIP-217ENST00000512385 SRPRBQ9Y5M8 271 aaKnown RBP15.47■□□□□ 0.07
SNCAIP-217ENST00000512385 GAKO14976 1311 aa15.47■□□□□ 0.07
SNCAIP-217ENST00000512385 TRIM49BA6NDI0 452 aa15.47■□□□□ 0.07
SNCAIP-217ENST00000512385 EGFRP00533 1210 aa15.47■□□□□ 0.07
SNCAIP-217ENST00000512385 HERVK_113P62684 666 aa15.47■□□□□ 0.07
SNCAIP-217ENST00000512385 CYP27A1Q02318 531 aa15.47■□□□□ 0.07
SNCAIP-217ENST00000512385 ESR2Q92731 530 aa15.47■□□□□ 0.07
SNCAIP-217ENST00000512385 TEKT1Q969V4 418 aa15.47■□□□□ 0.07
SNCAIP-217ENST00000512385 MKNK2Q9HBH9 465 aa15.47■□□□□ 0.07
SNCAIP-217ENST00000512385 IL17RBQ9NRM6 502 aa15.47■□□□□ 0.07
SNCAIP-217ENST00000512385 EHD2Q9NZN4 543 aa15.47■□□□□ 0.07
SNCAIP-217ENST00000512385 SAR1BQ9Y6B6 198 aa15.47■□□□□ 0.07
SNCAIP-217ENST00000512385 MACROD2A1Z1Q3 448 aa15.46■□□□□ 0.07
SNCAIP-217ENST00000512385 GNGT1P63211 74 aa15.46■□□□□ 0.07
SNCAIP-217ENST00000512385 UBXN1Q04323 297 aa15.46■□□□□ 0.07
SNCAIP-217ENST00000512385 SAFBQ15424 915 aaKnown RBP eCLIP15.46■□□□□ 0.07
SNCAIP-217ENST00000512385 CT47A1Q5JQC4 288 aaPredicted RBP15.46■□□□□ 0.07
SNCAIP-217ENST00000512385 RBM26Q5T8P6 1007 aaKnown RBP15.46■□□□□ 0.07
SNCAIP-217ENST00000512385 RRAGBQ5VZM2 374 aa15.46■□□□□ 0.07
SNCAIP-217ENST00000512385 KCTD16Q68DU8 428 aa15.46■□□□□ 0.07
SNCAIP-217ENST00000512385 SND1Q7KZF4 910 aaKnown RBP eCLIP15.46■□□□□ 0.07
SNCAIP-217ENST00000512385 CDAN1Q8IWY9 1227 aa15.46■□□□□ 0.07
SNCAIP-217ENST00000512385 CAGE1Q8TC20 777 aa15.46■□□□□ 0.07
SNCAIP-217ENST00000512385 DMGDHQ9UI17 866 aaKnown RBP15.46■□□□□ 0.07
SNCAIP-217ENST00000512385 ANAPC4Q9UJX5 808 aa15.46■□□□□ 0.07
SNCAIP-217ENST00000512385 EBAG9O00559 213 aa15.46■□□□□ 0.07
SNCAIP-217ENST00000512385 FMNL1O95466 1100 aaPredicted RBP15.46■□□□□ 0.07
SNCAIP-217ENST00000512385 CPP00450 1065 aa15.46■□□□□ 0.07
SNCAIP-217ENST00000512385 COPB1P53618 953 aaKnown RBP15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms