RNA–Protein interactions for RNA: ENST00000512049.5

SH3TC2-211, Transcript of SH3 domain and tetratricopeptide repeats 2, humanhuman

TSL 1 (best) BASIC

Gene SH3TC2, Length 4,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC2-211ENST00000512049 RPGRIP1Q96KN7 1286 aa12.6□□□□□ -0.39
SH3TC2-211ENST00000512049 PANK4Q9NVE7 773 aa12.6□□□□□ -0.39
SH3TC2-211ENST00000512049 ADD3Q9UEY8 706 aaKnown RBP12.6□□□□□ -0.39
SH3TC2-211ENST00000512049 GGA1Q9UJY5 639 aa12.6□□□□□ -0.39
SH3TC2-211ENST00000512049 PACSIN2Q9UNF0 486 aaPredicted RBP12.6□□□□□ -0.39
SH3TC2-211ENST00000512049 SPATA31A3Q5VYP0 1347 aa12.6□□□□□ -0.39
SH3TC2-211ENST00000512049 GYPCP04921 128 aa12.59□□□□□ -0.39
SH3TC2-211ENST00000512049 CCNE1P24864 410 aa12.59□□□□□ -0.39
SH3TC2-211ENST00000512049 GGCXP38435 758 aa12.59□□□□□ -0.39
SH3TC2-211ENST00000512049 CYP2J2P51589 502 aa12.59□□□□□ -0.39
SH3TC2-211ENST00000512049 ZBED6P86452 979 aa12.59□□□□□ -0.39
SH3TC2-211ENST00000512049 TRAPPC3LQ5T215 181 aa12.59□□□□□ -0.39
SH3TC2-211ENST00000512049 KCTD1Q719H9 257 aa12.59□□□□□ -0.39
SH3TC2-211ENST00000512049 PNMA8AQ86V59 439 aaPredicted RBP12.59□□□□□ -0.39
SH3TC2-211ENST00000512049 MYCT1Q8N699 235 aa12.59□□□□□ -0.39
SH3TC2-211ENST00000512049 ZNF579Q8NAF0 562 aaKnown RBP12.59□□□□□ -0.39
SH3TC2-211ENST00000512049 BICD1Q96G01 975 aa12.59□□□□□ -0.39
SH3TC2-211ENST00000512049 USP32Q8NFA0 1604 aa12.59□□□□□ -0.39
SH3TC2-211ENST00000512049 A0A1B0GTH6 734 aa12.59□□□□□ -0.39
SH3TC2-211ENST00000512049 EEF2P13639 858 aaKnown RBP12.59□□□□□ -0.39
SH3TC2-211ENST00000512049 CTNNA2P26232 953 aa12.59□□□□□ -0.39
SH3TC2-211ENST00000512049 TRAPPC10P48553 1259 aa12.59□□□□□ -0.39
SH3TC2-211ENST00000512049 NR1I3Q14994 352 aa12.59□□□□□ -0.39
SH3TC2-211ENST00000512049 MSL1Q68DK7 614 aa12.59□□□□□ -0.39
SH3TC2-211ENST00000512049 NFRKBQ6P4R8 1299 aa12.59□□□□□ -0.39
SH3TC2-211ENST00000512049 MGARPQ8TDB4 240 aa12.59□□□□□ -0.39
SH3TC2-211ENST00000512049 MMS19Q96T76 1030 aa12.59□□□□□ -0.39
SH3TC2-211ENST00000512049 NDST4Q9H3R1 872 aa12.59□□□□□ -0.39
SH3TC2-211ENST00000512049 MYO1AQ9UBC5 1043 aa12.59□□□□□ -0.39
SH3TC2-211ENST00000512049 A0A0U1RQJ8 604 aa12.59□□□□□ -0.39
SH3TC2-211ENST00000512049 SPOPO43791 374 aa12.59□□□□□ -0.39
SH3TC2-211ENST00000512049 CYP19A1P11511 503 aaPredicted RBP12.59□□□□□ -0.39
SH3TC2-211ENST00000512049 TNFAIP3P21580 790 aa12.59□□□□□ -0.39
SH3TC2-211ENST00000512049 RPL13P26373 211 aaKnown RBP12.59□□□□□ -0.39
SH3TC2-211ENST00000512049 CYP2C19P33261 490 aa12.59□□□□□ -0.39
SH3TC2-211ENST00000512049 PPP1R2P41236 205 aa12.59□□□□□ -0.39
SH3TC2-211ENST00000512049 VPS41P49754 854 aa12.59□□□□□ -0.39
SH3TC2-211ENST00000512049 PDCLQ13371 301 aa12.59□□□□□ -0.39
SH3TC2-211ENST00000512049 CCDC174Q6PII3 467 aa12.59□□□□□ -0.39
SH3TC2-211ENST00000512049 TMC4Q7Z404 712 aa12.59□□□□□ -0.39
SH3TC2-211ENST00000512049 CCDC50Q8IVM0 306 aa12.59□□□□□ -0.39
SH3TC2-211ENST00000512049 TPH2Q8IWU9 490 aa12.59□□□□□ -0.39
SH3TC2-211ENST00000512049 PSTPIP2Q9H939 334 aa12.59□□□□□ -0.39
SH3TC2-211ENST00000512049 VEZTQ9HBM0 779 aa12.59□□□□□ -0.39
SH3TC2-211ENST00000512049 DCP1AQ9NPI6 582 aaPredicted RBP12.59□□□□□ -0.39
SH3TC2-211ENST00000512049 NFU1Q9UMS0 254 aa12.59□□□□□ -0.39
SH3TC2-211ENST00000512049 ADGRL3Q9HAR2 1447 aa12.59□□□□□ -0.39
SH3TC2-211ENST00000512049 A0A1W2PRG0 241 aa12.59□□□□□ -0.39
SH3TC2-211ENST00000512049 KRIT1O00522 736 aa12.59□□□□□ -0.39
SH3TC2-211ENST00000512049 PPP1R7Q15435 360 aa12.59□□□□□ -0.39
SH3TC2-211ENST00000512049 STXBP4Q6ZWJ1 553 aa12.59□□□□□ -0.39
SH3TC2-211ENST00000512049 CTTNBP2NLQ9P2B4 639 aa12.59□□□□□ -0.39
SH3TC2-211ENST00000512049 ARMCX3Q9UH62 379 aaPredicted RBP12.59□□□□□ -0.39
SH3TC2-211ENST00000512049 DNM3Q9UQ16 869 aa12.59□□□□□ -0.39
SH3TC2-211ENST00000512049 STK36Q9NRP7 1315 aa12.58□□□□□ -0.4
SH3TC2-211ENST00000512049 ACTN4O43707 911 aaKnown RBP12.58□□□□□ -0.4
SH3TC2-211ENST00000512049 TBC1D8O95759 1140 aa12.58□□□□□ -0.4
SH3TC2-211ENST00000512049 KLK7P49862 253 aa12.58□□□□□ -0.4
SH3TC2-211ENST00000512049 DDX25Q9UHL0 483 aaKnown RBP12.58□□□□□ -0.4
SH3TC2-211ENST00000512049 ATP6V0A2Q9Y487 856 aa12.58□□□□□ -0.4
SH3TC2-211ENST00000512049 PREX1Q8TCU6 1659 aa12.58□□□□□ -0.4
SH3TC2-211ENST00000512049 LGALS16A8MUM7 142 aa12.58□□□□□ -0.4
SH3TC2-211ENST00000512049 CLIC2O15247 247 aa12.58□□□□□ -0.4
SH3TC2-211ENST00000512049 XRCC5P13010 732 aaKnown RBP12.58□□□□□ -0.4
SH3TC2-211ENST00000512049 UBXN2AP68543 259 aa12.58□□□□□ -0.4
SH3TC2-211ENST00000512049 PLCB3Q01970 1234 aa12.58□□□□□ -0.4
SH3TC2-211ENST00000512049 DOK7Q18PE1 504 aa12.58□□□□□ -0.4
SH3TC2-211ENST00000512049 CCDC26Q8TAB7 109 aa12.58□□□□□ -0.4
SH3TC2-211ENST00000512049 KIF4AO95239 1232 aa12.58□□□□□ -0.4
SH3TC2-211ENST00000512049 H2AFXP16104 143 aaPredicted RBP12.58□□□□□ -0.4
SH3TC2-211ENST00000512049 B4GALNT4Q76KP1 1039 aa12.58□□□□□ -0.4
SH3TC2-211ENST00000512049 DHTKD1Q96HY7 919 aaPredicted RBP12.58□□□□□ -0.4
SH3TC2-211ENST00000512049 PNKPQ96T60 521 aa12.58□□□□□ -0.4
SH3TC2-211ENST00000512049 AP1M1Q9BXS5 423 aa12.58□□□□□ -0.4
SH3TC2-211ENST00000512049 PRM3Q9NNZ6 103 aa12.58□□□□□ -0.4
SH3TC2-211ENST00000512049 TMEM260Q9NX78 707 aa12.58□□□□□ -0.4
SH3TC2-211ENST00000512049 PCDHA13Q9Y5I0 950 aa12.58□□□□□ -0.4
SH3TC2-211ENST00000512049 EXOC3O60645 756 aa12.57□□□□□ -0.4
SH3TC2-211ENST00000512049 FLOT1O75955 427 aa12.57□□□□□ -0.4
SH3TC2-211ENST00000512049 NR2F2P24468 414 aa12.57□□□□□ -0.4
SH3TC2-211ENST00000512049 GFPT1Q06210 699 aaPredicted RBP12.57□□□□□ -0.4
SH3TC2-211ENST00000512049 IFT88Q13099 833 aa12.57□□□□□ -0.4
SH3TC2-211ENST00000512049 SPICE1Q8N0Z3 855 aa12.57□□□□□ -0.4
SH3TC2-211ENST00000512049 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.57□□□□□ -0.4
SH3TC2-211ENST00000512049 MINPP1Q9UNW1 487 aa12.57□□□□□ -0.4
SH3TC2-211ENST00000512049 NF2P35240 595 aa12.57□□□□□ -0.4
SH3TC2-211ENST00000512049 SNAP25P60880 206 aa12.57□□□□□ -0.4
SH3TC2-211ENST00000512049 GBP6Q6ZN66 633 aa12.57□□□□□ -0.4
SH3TC2-211ENST00000512049 PROCA1Q8NCQ7 364 aaPredicted RBP12.57□□□□□ -0.4
SH3TC2-211ENST00000512049 SH3RF3Q8TEJ3 882 aaPredicted RBP12.57□□□□□ -0.4
SH3TC2-211ENST00000512049 ZNF446Q9NWS9 450 aa12.57□□□□□ -0.4
SH3TC2-211ENST00000512049 UTP11Q9Y3A2 253 aaKnown RBP12.57□□□□□ -0.4
SH3TC2-211ENST00000512049 CCDC172P0C7W6 258 aa12.57□□□□□ -0.4
SH3TC2-211ENST00000512049 IRX3P78415 501 aaPredicted RBP12.57□□□□□ -0.4
SH3TC2-211ENST00000512049 PFKFB3Q16875 520 aaPredicted RBP12.57□□□□□ -0.4
SH3TC2-211ENST00000512049 EARS2Q5JPH6 523 aaKnown RBP12.57□□□□□ -0.4
SH3TC2-211ENST00000512049 GSTA5Q7RTV2 222 aa12.57□□□□□ -0.4
SH3TC2-211ENST00000512049 MARCH10Q8NA82 808 aaPredicted RBP12.57□□□□□ -0.4
SH3TC2-211ENST00000512049 MAP3K14Q99558 947 aa12.57□□□□□ -0.4
SH3TC2-211ENST00000512049 HPSEQ9Y251 543 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms