RNA–Protein interactions for RNA: ENST00000511732.1

COL1A1-213, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-213ENST00000511732 USH1GQ495M9 461 aa17.93■□□□□ 0.46
COL1A1-213ENST00000511732 CYB5R4Q7L1T6 521 aa17.93■□□□□ 0.46
COL1A1-213ENST00000511732 FAM126BQ8IXS8 530 aa17.93■□□□□ 0.46
COL1A1-213ENST00000511732 KRT23Q9C075 422 aa17.93■□□□□ 0.46
COL1A1-213ENST00000511732 GRIN2DO15399 1336 aa17.93■□□□□ 0.46
COL1A1-213ENST00000511732 CDC37Q16543 378 aaPredicted RBP17.92■□□□□ 0.46
COL1A1-213ENST00000511732 ADGRF4Q8IZF3 695 aa17.92■□□□□ 0.46
COL1A1-213ENST00000511732 SLC43A3Q8NBI5 491 aa17.92■□□□□ 0.46
COL1A1-213ENST00000511732 TBC1D5Q92609 795 aa17.92■□□□□ 0.46
COL1A1-213ENST00000511732 AP5M1Q9H0R1 490 aa17.92■□□□□ 0.46
COL1A1-213ENST00000511732 PNMA2Q9UL42 364 aa17.92■□□□□ 0.46
COL1A1-213ENST00000511732 Q9Y3F1 56 aa17.92■□□□□ 0.46
COL1A1-213ENST00000511732 MROH7Q68CQ1 1323 aa17.92■□□□□ 0.46
COL1A1-213ENST00000511732 RAD50Q92878 1312 aa17.92■□□□□ 0.46
COL1A1-213ENST00000511732 LOC102724159A0A0B4J2E5 919 aa17.91■□□□□ 0.46
COL1A1-213ENST00000511732 RBM47A0AV96 593 aaKnown RBP17.91■□□□□ 0.46
COL1A1-213ENST00000511732 TIMP1P01033 207 aa17.91■□□□□ 0.46
COL1A1-213ENST00000511732 CYP21A2P08686 494 aa17.91■□□□□ 0.46
COL1A1-213ENST00000511732 EDNRBP24530 442 aa17.91■□□□□ 0.46
COL1A1-213ENST00000511732 PWP2Q15269 919 aaKnown RBP17.91■□□□□ 0.46
COL1A1-213ENST00000511732 SEC23AQ15436 765 aa17.91■□□□□ 0.46
COL1A1-213ENST00000511732 DUSP28Q4G0W2 176 aa17.91■□□□□ 0.46
COL1A1-213ENST00000511732 ASPRV1Q53RT3 343 aa17.91■□□□□ 0.46
COL1A1-213ENST00000511732 STAG2Q8N3U4 1231 aa17.91■□□□□ 0.46
COL1A1-213ENST00000511732 CNNM2Q9H8M5 875 aa17.91■□□□□ 0.46
COL1A1-213ENST00000511732 TAF6LQ9Y6J9 622 aa17.91■□□□□ 0.46
COL1A1-213ENST00000511732 MYH6P13533 1939 aa17.91■□□□□ 0.46
COL1A1-213ENST00000511732 CD4P01730 458 aa17.9■□□□□ 0.46
COL1A1-213ENST00000511732 PARP1P09874 1014 aaKnown RBP17.9■□□□□ 0.46
COL1A1-213ENST00000511732 FPGSQ05932 587 aa17.9■□□□□ 0.46
COL1A1-213ENST00000511732 QRICH1Q2TAL8 776 aa17.9■□□□□ 0.46
COL1A1-213ENST00000511732 FAM109BQ6ICB4 259 aaPredicted RBP17.9■□□□□ 0.46
COL1A1-213ENST00000511732 UBAC1Q9BSL1 405 aa17.9■□□□□ 0.46
COL1A1-213ENST00000511732 WDR11Q9BZH6 1224 aa17.9■□□□□ 0.46
COL1A1-213ENST00000511732 JMJD4Q9H9V9 463 aa17.9■□□□□ 0.46
COL1A1-213ENST00000511732 COL6A3P12111 3177 aa17.9■□□□□ 0.46
COL1A1-213ENST00000511732 PSMC6P62333 389 aa17.89■□□□□ 0.45
COL1A1-213ENST00000511732 ITGA7Q13683 1181 aa17.89■□□□□ 0.45
COL1A1-213ENST00000511732 IFIT1BQ5T764 474 aaKnown RBP17.89■□□□□ 0.45
COL1A1-213ENST00000511732 MFSD5Q6N075 450 aa17.89■□□□□ 0.45
COL1A1-213ENST00000511732 RGS22Q8NE09 1264 aa17.89■□□□□ 0.45
COL1A1-213ENST00000511732 DNERQ8NFT8 737 aa17.89■□□□□ 0.45
COL1A1-213ENST00000511732 FAM161BQ96MY7 647 aa17.89■□□□□ 0.45
COL1A1-213ENST00000511732 GUCD1Q96NT3 240 aa17.89■□□□□ 0.45
COL1A1-213ENST00000511732 VAT1LQ9HCJ6 419 aa17.89■□□□□ 0.45
COL1A1-213ENST00000511732 COL20A1Q9P218 1284 aa17.89■□□□□ 0.45
COL1A1-213ENST00000511732 SGSM2O43147 1006 aa17.88■□□□□ 0.45
COL1A1-213ENST00000511732 CABYRO75952 493 aa17.88■□□□□ 0.45
COL1A1-213ENST00000511732 PDE4DQ08499 809 aa17.88■□□□□ 0.45
COL1A1-213ENST00000511732 C16orf59Q7L2K0 433 aa17.88■□□□□ 0.45
COL1A1-213ENST00000511732 RUFY2Q8WXA3 655 aa17.88■□□□□ 0.45
COL1A1-213ENST00000511732 TAAR1Q96RJ0 339 aa17.88■□□□□ 0.45
COL1A1-213ENST00000511732 PPP1R12CQ9BZL4 782 aa17.88■□□□□ 0.45
COL1A1-213ENST00000511732 SENP2Q9HC62 589 aa17.88■□□□□ 0.45
COL1A1-213ENST00000511732 STXBP5LQ9Y2K9 1186 aa17.88■□□□□ 0.45
COL1A1-213ENST00000511732 ABCB11O95342 1321 aa17.88■□□□□ 0.45
COL1A1-213ENST00000511732 LAMA2P24043 3122 aaKnown RBP17.87■□□□□ 0.45
COL1A1-213ENST00000511732 ZEB2O60315 1214 aa17.87■□□□□ 0.45
COL1A1-213ENST00000511732 SMAD3P84022 425 aaKnown RBP17.87■□□□□ 0.45
COL1A1-213ENST00000511732 STOX1Q6ZVD7 989 aa17.87■□□□□ 0.45
COL1A1-213ENST00000511732 SYTL5Q8TDW5 730 aaPredicted RBP17.87■□□□□ 0.45
COL1A1-213ENST00000511732 COPS5Q92905 334 aa17.87■□□□□ 0.45
COL1A1-213ENST00000511732 RNPC3Q96LT9 517 aaKnown RBP17.87■□□□□ 0.45
COL1A1-213ENST00000511732 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.87■□□□□ 0.45
COL1A1-213ENST00000511732 MAD2L2Q9UI95 211 aa17.87■□□□□ 0.45
COL1A1-213ENST00000511732 PALM3A6NDB9 673 aaPredicted RBP17.86■□□□□ 0.45
COL1A1-213ENST00000511732 TLR3O15455 904 aaKnown RBP17.86■□□□□ 0.45
COL1A1-213ENST00000511732 DHX16O60231 1041 aaKnown RBP17.86■□□□□ 0.45
COL1A1-213ENST00000511732 B4GALT4O60513 344 aa17.86■□□□□ 0.45
COL1A1-213ENST00000511732 ARIH2O95376 493 aa17.86■□□□□ 0.45
COL1A1-213ENST00000511732 CSF2RAP15509 400 aa17.86■□□□□ 0.45
COL1A1-213ENST00000511732 SLC35G1Q2M3R5 365 aa17.86■□□□□ 0.45
COL1A1-213ENST00000511732 ZNF697Q5TEC3 545 aa17.86■□□□□ 0.45
COL1A1-213ENST00000511732 FBXO11Q86XK2 927 aa17.86■□□□□ 0.45
COL1A1-213ENST00000511732 OR6J1Q8NGC5 347 aa17.86■□□□□ 0.45
COL1A1-213ENST00000511732 MTMR8Q96EF0 704 aa17.86■□□□□ 0.45
COL1A1-213ENST00000511732 TRPV6Q9H1D0 765 aa17.86■□□□□ 0.45
COL1A1-213ENST00000511732 U3KPZ7 1027 aaPredicted RBP17.86■□□□□ 0.45
COL1A1-213ENST00000511732 UMODL1Q5DID0 1318 aa17.86■□□□□ 0.45
COL1A1-213ENST00000511732 KLRF2D3W0D1 207 aa17.85■□□□□ 0.45
COL1A1-213ENST00000511732 E7EWF7 191 aa17.85■□□□□ 0.45
COL1A1-213ENST00000511732 OPLAHO14841 1288 aa17.85■□□□□ 0.45
COL1A1-213ENST00000511732 PPP1R11O60927 126 aaPredicted RBP17.85■□□□□ 0.45
COL1A1-213ENST00000511732 CYP2C18P33260 490 aa17.85■□□□□ 0.45
COL1A1-213ENST00000511732 PURAQ00577 322 aaKnown RBP17.85■□□□□ 0.45
COL1A1-213ENST00000511732 TRDNQ13061 729 aa17.85■□□□□ 0.45
COL1A1-213ENST00000511732 PPP2R5BQ15173 497 aa17.85■□□□□ 0.45
COL1A1-213ENST00000511732 CHST3Q7LGC8 479 aa17.85■□□□□ 0.45
COL1A1-213ENST00000511732 SCFD2Q8WU76 684 aa17.85■□□□□ 0.45
COL1A1-213ENST00000511732 MAP4K1Q92918 833 aa17.85■□□□□ 0.45
COL1A1-213ENST00000511732 TTYH1Q9H313 450 aaPredicted RBP17.85■□□□□ 0.45
COL1A1-213ENST00000511732 SEMA6BQ9H3T3 888 aa17.85■□□□□ 0.45
COL1A1-213ENST00000511732 KIAA1217Q5T5P2 1943 aa17.84■□□□□ 0.45
COL1A1-213ENST00000511732 MYL3P08590 195 aa17.84■□□□□ 0.45
COL1A1-213ENST00000511732 ACRP10323 421 aa17.84■□□□□ 0.45
COL1A1-213ENST00000511732 TXNP10599 105 aaKnown RBP17.84■□□□□ 0.45
COL1A1-213ENST00000511732 PPIGQ13427 754 aaKnown RBP eCLIP17.84■□□□□ 0.45
COL1A1-213ENST00000511732 TMEM240Q5SV17 173 aa17.84■□□□□ 0.45
COL1A1-213ENST00000511732 SLC17A8Q8NDX2 589 aa17.84■□□□□ 0.45
COL1A1-213ENST00000511732 MPHOSPH6Q99547 160 aaKnown RBP17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms