RNA–Protein interactions for RNA: ENST00000511708.1

COPS4-210, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 3

Gene COPS4, Length 824 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-210ENST00000511708 PLXNA3P51805 1871 aa14.4□□□□□ -0.1
COPS4-210ENST00000511708 USP17L12C9JPN9 530 aa14.39□□□□□ -0.11
COPS4-210ENST00000511708 USP17L21D6R901 530 aa14.39□□□□□ -0.11
COPS4-210ENST00000511708 ATP8B2P98198 1209 aa14.39□□□□□ -0.11
COPS4-210ENST00000511708 TCF15Q12870 199 aa14.39□□□□□ -0.11
COPS4-210ENST00000511708 NBPF20Q3BBV1 942 aa14.39□□□□□ -0.11
COPS4-210ENST00000511708 DUSP28Q4G0W2 176 aa14.39□□□□□ -0.11
COPS4-210ENST00000511708 NFRKBQ6P4R8 1299 aa14.39□□□□□ -0.11
COPS4-210ENST00000511708 MORC4Q8TE76 937 aa14.39□□□□□ -0.11
COPS4-210ENST00000511708 KIFC2Q96AC6 838 aa14.39□□□□□ -0.11
COPS4-210ENST00000511708 PABPC5Q96DU9 382 aaKnown RBP14.39□□□□□ -0.11
COPS4-210ENST00000511708 MRPL38Q96DV4 380 aaKnown RBP14.39□□□□□ -0.11
COPS4-210ENST00000511708 MTG1Q9BT17 334 aaPredicted RBP14.39□□□□□ -0.11
COPS4-210ENST00000511708 ALG13Q9NP73 1137 aaKnown RBP14.39□□□□□ -0.11
COPS4-210ENST00000511708 VTA1Q9NP79 307 aa14.39□□□□□ -0.11
COPS4-210ENST00000511708 HOMER2Q9NSB8 354 aa14.39□□□□□ -0.11
COPS4-210ENST00000511708 FAM50BQ9Y247 325 aa14.39□□□□□ -0.11
COPS4-210ENST00000511708 CTDP1Q9Y5B0 961 aaPredicted RBP14.39□□□□□ -0.11
COPS4-210ENST00000511708 MYH7P12883 1935 aa14.39□□□□□ -0.11
COPS4-210ENST00000511708 ZBED9Q6R2W3 1325 aa14.39□□□□□ -0.11
COPS4-210ENST00000511708 NLRC5Q86WI3 1866 aa14.38□□□□□ -0.11
COPS4-210ENST00000511708 GFRA3O60609 400 aa14.38□□□□□ -0.11
COPS4-210ENST00000511708 RARSP54136 660 aaKnown RBP14.38□□□□□ -0.11
COPS4-210ENST00000511708 PTPN11Q06124 597 aaPredicted RBP14.38□□□□□ -0.11
COPS4-210ENST00000511708 EEPD1Q7L9B9 569 aa14.38□□□□□ -0.11
COPS4-210ENST00000511708 PRRX2Q99811 253 aa14.38□□□□□ -0.11
COPS4-210ENST00000511708 FEM1BQ9UK73 627 aa14.38□□□□□ -0.11
COPS4-210ENST00000511708 COG6Q9Y2V7 657 aa14.38□□□□□ -0.11
COPS4-210ENST00000511708 BCAR3O75815 825 aa14.37□□□□□ -0.11
COPS4-210ENST00000511708 FDX1P10109 184 aa14.37□□□□□ -0.11
COPS4-210ENST00000511708 TRIM27P14373 513 aa14.37□□□□□ -0.11
COPS4-210ENST00000511708 CPT1AP50416 773 aa14.37□□□□□ -0.11
COPS4-210ENST00000511708 TCTN1Q2MV58 587 aa14.37□□□□□ -0.11
COPS4-210ENST00000511708 FAM47CQ5HY64 1035 aa14.37□□□□□ -0.11
COPS4-210ENST00000511708 CNKSR3Q6P9H4 555 aa14.37□□□□□ -0.11
COPS4-210ENST00000511708 KIAA1211Q6ZU35 1233 aa14.37□□□□□ -0.11
COPS4-210ENST00000511708 FBXO22Q8NEZ5 403 aa14.37□□□□□ -0.11
COPS4-210ENST00000511708 AFAP1L1Q8TED9 768 aa14.37□□□□□ -0.11
COPS4-210ENST00000511708 CTAGE1Q96RT6 745 aa14.37□□□□□ -0.11
COPS4-210ENST00000511708 RNF146Q9NTX7 359 aa14.37□□□□□ -0.11
COPS4-210ENST00000511708 CTNNA3Q9UI47 895 aa14.37□□□□□ -0.11
COPS4-210ENST00000511708 MUTYHQ9UIF7 546 aa14.37□□□□□ -0.11
COPS4-210ENST00000511708 TNNQ9UQP3 1299 aa14.37□□□□□ -0.11
COPS4-210ENST00000511708 VPS13AQ96RL7 3174 aa14.36□□□□□ -0.11
COPS4-210ENST00000511708 MBD4O95243 580 aa14.36□□□□□ -0.11
COPS4-210ENST00000511708 CXCL10P02778 98 aa14.36□□□□□ -0.11
COPS4-210ENST00000511708 MYL3P08590 195 aa14.36□□□□□ -0.11
COPS4-210ENST00000511708 RASA1P20936 1047 aa14.36□□□□□ -0.11
COPS4-210ENST00000511708 TIGD5Q53EQ6 642 aa14.36□□□□□ -0.11
COPS4-210ENST00000511708 AMOTL1Q8IY63 956 aa14.36□□□□□ -0.11
COPS4-210ENST00000511708 CAGE1Q8TC20 777 aa14.36□□□□□ -0.11
COPS4-210ENST00000511708 PPP1R13LQ8WUF5 828 aa14.36□□□□□ -0.11
COPS4-210ENST00000511708 EDAQ92838 391 aa14.36□□□□□ -0.11
COPS4-210ENST00000511708 C17orf80Q9BSJ5 609 aa14.36□□□□□ -0.11
COPS4-210ENST00000511708 CACNA1BQ00975 2339 aa14.36□□□□□ -0.11
COPS4-210ENST00000511708 COL4A6Q14031 1691 aa14.36□□□□□ -0.11
COPS4-210ENST00000511708 IGKV6D-41A0A0C4DH26 115 aa14.35□□□□□ -0.11
COPS4-210ENST00000511708 ABHD14A-ACY1A0A1B0GW23 586 aa14.35□□□□□ -0.11
COPS4-210ENST00000511708 RBM47A0AV96 593 aaKnown RBP14.35□□□□□ -0.11
COPS4-210ENST00000511708 LTBRP36941 435 aa14.35□□□□□ -0.11
COPS4-210ENST00000511708 RBL2Q08999 1139 aa14.35□□□□□ -0.11
COPS4-210ENST00000511708 SMAD2Q15796 467 aaKnown RBP14.35□□□□□ -0.11
COPS4-210ENST00000511708 PKN1Q16512 942 aa14.35□□□□□ -0.11
COPS4-210ENST00000511708 TKFCQ3LXA3 575 aa14.35□□□□□ -0.11
COPS4-210ENST00000511708 SLFNL1Q499Z3 407 aa14.35□□□□□ -0.11
COPS4-210ENST00000511708 CTR9Q6PD62 1173 aa14.35□□□□□ -0.11
COPS4-210ENST00000511708 RNF135Q8IUD6 432 aa14.35□□□□□ -0.11
COPS4-210ENST00000511708 BANK1Q8NDB2 785 aa14.35□□□□□ -0.11
COPS4-210ENST00000511708 MKL1Q969V6 931 aa14.35□□□□□ -0.11
COPS4-210ENST00000511708 CYP39A1Q9NYL5 469 aa14.35□□□□□ -0.11
COPS4-210ENST00000511708 RALGAPA2Q2PPJ7 1873 aa14.35□□□□□ -0.11
COPS4-210ENST00000511708 WDR87Q6ZQQ6 2873 aa14.34□□□□□ -0.11
COPS4-210ENST00000511708 NBNO60934 754 aa14.34□□□□□ -0.11
COPS4-210ENST00000511708 PARNO95453 639 aaKnown RBP14.34□□□□□ -0.11
COPS4-210ENST00000511708 PTPROQ16827 1216 aa14.34□□□□□ -0.11
COPS4-210ENST00000511708 TCEAL5Q5H9L2 206 aa14.34□□□□□ -0.11
COPS4-210ENST00000511708 RPAP2Q8IXW5 612 aaPredicted RBP14.34□□□□□ -0.11
COPS4-210ENST00000511708 SP7Q8TDD2 431 aaPredicted RBP14.34□□□□□ -0.11
COPS4-210ENST00000511708 WDR11Q9BZH6 1224 aa14.34□□□□□ -0.11
COPS4-210ENST00000511708 GPHNQ9NQX3 736 aaPredicted RBP14.34□□□□□ -0.11
COPS4-210ENST00000511708 CLIP2Q9UDT6 1046 aa14.34□□□□□ -0.11
COPS4-210ENST00000511708 SYNPO2Q9UMS6 1093 aa14.34□□□□□ -0.11
COPS4-210ENST00000511708 GVINP1Q7Z2Y8 2422 aa14.33□□□□□ -0.12
COPS4-210ENST00000511708 TMEM221A6NGB7 291 aa14.33□□□□□ -0.12
COPS4-210ENST00000511708 A6NJR5 290 aa14.33□□□□□ -0.12
COPS4-210ENST00000511708 M0R296 226 aa14.33□□□□□ -0.12
COPS4-210ENST00000511708 GOLIM4O00461 696 aa14.33□□□□□ -0.12
COPS4-210ENST00000511708 KPNA6O60684 536 aa14.33□□□□□ -0.12
COPS4-210ENST00000511708 EFCAB14O75071 495 aa14.33□□□□□ -0.12
COPS4-210ENST00000511708 SELPP16109 830 aa14.33□□□□□ -0.12
COPS4-210ENST00000511708 ADD2P35612 726 aa14.33□□□□□ -0.12
COPS4-210ENST00000511708 HTRA4P83105 476 aaPredicted RBP14.33□□□□□ -0.12
COPS4-210ENST00000511708 MUM1L1Q5H9M0 696 aa14.33□□□□□ -0.12
COPS4-210ENST00000511708 TRIM67Q6ZTA4 783 aa14.33□□□□□ -0.12
COPS4-210ENST00000511708 LRRC8DQ7L1W4 858 aa14.33□□□□□ -0.12
COPS4-210ENST00000511708 AACSQ86V21 672 aa14.33□□□□□ -0.12
COPS4-210ENST00000511708 CCDC155Q8N6L0 562 aa14.33□□□□□ -0.12
COPS4-210ENST00000511708 GMCL1P1Q8NEA9 526 aa14.33□□□□□ -0.12
COPS4-210ENST00000511708 DHX38Q92620 1227 aaKnown RBP14.33□□□□□ -0.12
COPS4-210ENST00000511708 TRERF1Q96PN7 1200 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms