RNA–Protein interactions for RNA: ENST00000511316.1

HMGB2-205, Transcript of high mobility group box 2, humanhuman

TSL 2

Gene HMGB2, Length 1,841 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-205ENST00000511316 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.5□□□□□ -0.09
HMGB2-205ENST00000511316 UBXN6Q9BZV1 441 aa14.5□□□□□ -0.09
HMGB2-205ENST00000511316 PICK1Q9NRD5 415 aa14.5□□□□□ -0.09
HMGB2-205ENST00000511316 MYO1AQ9UBC5 1043 aa14.5□□□□□ -0.09
HMGB2-205ENST00000511316 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.5□□□□□ -0.09
HMGB2-205ENST00000511316 MRFAP1Q9Y605 127 aa14.5□□□□□ -0.09
HMGB2-205ENST00000511316 GOLGA8AA7E2F4 631 aa14.5□□□□□ -0.09
HMGB2-205ENST00000511316 EIF3JO75822 258 aaKnown RBP14.5□□□□□ -0.09
HMGB2-205ENST00000511316 GH2P01242 217 aa14.5□□□□□ -0.09
HMGB2-205ENST00000511316 CETPP11597 493 aa14.5□□□□□ -0.09
HMGB2-205ENST00000511316 ZNF18P17022 549 aa14.5□□□□□ -0.09
HMGB2-205ENST00000511316 XBP1P17861 261 aa14.5□□□□□ -0.09
HMGB2-205ENST00000511316 PPP2R3AQ06190 1150 aa14.5□□□□□ -0.09
HMGB2-205ENST00000511316 SPP2Q13103 211 aa14.5□□□□□ -0.09
HMGB2-205ENST00000511316 DGKZQ13574 1117 aa14.5□□□□□ -0.09
HMGB2-205ENST00000511316 FILIP1LQ4L180 1135 aa14.5□□□□□ -0.09
HMGB2-205ENST00000511316 NOM1Q5C9Z4 860 aaKnown RBP14.5□□□□□ -0.09
HMGB2-205ENST00000511316 C16orf86Q6ZW13 317 aa14.5□□□□□ -0.09
HMGB2-205ENST00000511316 CRACR2BQ8N4Y2 399 aaPredicted RBP14.5□□□□□ -0.09
HMGB2-205ENST00000511316 ZBTB21Q9ULJ3 1066 aa14.5□□□□□ -0.09
HMGB2-205ENST00000511316 ASNSP08243 561 aa14.49□□□□□ -0.09
HMGB2-205ENST00000511316 PTPREP23469 700 aa14.49□□□□□ -0.09
HMGB2-205ENST00000511316 CDK8P49336 464 aa14.49□□□□□ -0.09
HMGB2-205ENST00000511316 GNG11P61952 73 aa14.49□□□□□ -0.09
HMGB2-205ENST00000511316 CRHR2Q13324 411 aa14.49□□□□□ -0.09
HMGB2-205ENST00000511316 DOCK1Q14185 1865 aa14.49□□□□□ -0.09
HMGB2-205ENST00000511316 CERKLQ49MI3 558 aaPredicted RBP14.49□□□□□ -0.09
HMGB2-205ENST00000511316 SH3D19Q5HYK7 790 aa14.49□□□□□ -0.09
HMGB2-205ENST00000511316 NFXL1Q6ZNB6 911 aa14.49□□□□□ -0.09
HMGB2-205ENST00000511316 RSRC2Q7L4I2 434 aaKnown RBP14.49□□□□□ -0.09
HMGB2-205ENST00000511316 ZNF280CQ8ND82 737 aa14.49□□□□□ -0.09
HMGB2-205ENST00000511316 ACBD3Q9H3P7 528 aa14.49□□□□□ -0.09
HMGB2-205ENST00000511316 PCDHA5Q9Y5H7 936 aa14.49□□□□□ -0.09
HMGB2-205ENST00000511316 SLC12A7Q9Y666 1083 aa14.49□□□□□ -0.09
HMGB2-205ENST00000511316 VWA3AA6NCI4 1184 aa14.48□□□□□ -0.09
HMGB2-205ENST00000511316 TRIM75PA6NK02 468 aa14.48□□□□□ -0.09
HMGB2-205ENST00000511316 USP17L5A8MUK1 530 aa14.48□□□□□ -0.09
HMGB2-205ENST00000511316 ATP1A3P13637 1013 aa14.48□□□□□ -0.09
HMGB2-205ENST00000511316 MARCKSP29966 332 aaPredicted RBP14.48□□□□□ -0.09
HMGB2-205ENST00000511316 HAND2P61296 217 aa14.48□□□□□ -0.09
HMGB2-205ENST00000511316 TRIM14Q14142 442 aa14.48□□□□□ -0.09
HMGB2-205ENST00000511316 OTUD7BQ6GQQ9 843 aa14.48□□□□□ -0.09
HMGB2-205ENST00000511316 TMEM139Q8IV31 216 aa14.48□□□□□ -0.09
HMGB2-205ENST00000511316 RNF41Q9H4P4 317 aaPredicted RBP14.48□□□□□ -0.09
HMGB2-205ENST00000511316 GINM1Q9NU53 330 aa14.48□□□□□ -0.09
HMGB2-205ENST00000511316 FANCLQ9NW38 375 aa14.48□□□□□ -0.09
HMGB2-205ENST00000511316 CASP8AP2Q9UKL3 1982 aa14.48□□□□□ -0.09
HMGB2-205ENST00000511316 NAV1Q8NEY1 1877 aa14.48□□□□□ -0.09
HMGB2-205ENST00000511316 AKR1B15C9JRZ8 316 aaPredicted RBP14.48□□□□□ -0.09
HMGB2-205ENST00000511316 KIF5CO60282 957 aa14.48□□□□□ -0.09
HMGB2-205ENST00000511316 DEXIO95424 95 aa14.48□□□□□ -0.09
HMGB2-205ENST00000511316 ALDH1A1P00352 501 aa14.48□□□□□ -0.09
HMGB2-205ENST00000511316 MMP1P03956 469 aa14.48□□□□□ -0.09
HMGB2-205ENST00000511316 TXLNAP40222 546 aa14.48□□□□□ -0.09
HMGB2-205ENST00000511316 SARSP49591 514 aaKnown RBP14.48□□□□□ -0.09
HMGB2-205ENST00000511316 MDM2Q00987 491 aaPredicted RBP14.48□□□□□ -0.09
HMGB2-205ENST00000511316 SPAG1Q07617 926 aa14.48□□□□□ -0.09
HMGB2-205ENST00000511316 SEMA3FQ13275 785 aa14.48□□□□□ -0.09
HMGB2-205ENST00000511316 PNOCQ13519 176 aa14.48□□□□□ -0.09
HMGB2-205ENST00000511316 MORC3Q14149 939 aa14.48□□□□□ -0.09
HMGB2-205ENST00000511316 CC2D1AQ6P1N0 951 aaPredicted RBP14.48□□□□□ -0.09
HMGB2-205ENST00000511316 PPFIBP1Q86W92 1011 aa14.48□□□□□ -0.09
HMGB2-205ENST00000511316 CNGA4Q8IV77 575 aa14.48□□□□□ -0.09
HMGB2-205ENST00000511316 ERCC4Q92889 916 aaPredicted RBP14.48□□□□□ -0.09
HMGB2-205ENST00000511316 EXOC4Q96A65 974 aa14.48□□□□□ -0.09
HMGB2-205ENST00000511316 CARD6Q9BX69 1037 aa14.48□□□□□ -0.09
HMGB2-205ENST00000511316 NACAP1Q9BZK3 213 aa14.48□□□□□ -0.09
HMGB2-205ENST00000511316 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.48□□□□□ -0.09
HMGB2-205ENST00000511316 TAOK2Q9UL54 1235 aa14.48□□□□□ -0.09
HMGB2-205ENST00000511316 PTPRFP10586 1907 aa14.47□□□□□ -0.09
HMGB2-205ENST00000511316 A0A1W2PRG0 241 aa14.47□□□□□ -0.09
HMGB2-205ENST00000511316 ERICH2A1L162 156 aa14.47□□□□□ -0.09
HMGB2-205ENST00000511316 GPR25O00155 361 aa14.47□□□□□ -0.09
HMGB2-205ENST00000511316 MCM3P25205 808 aa14.47□□□□□ -0.09
HMGB2-205ENST00000511316 PLA2G4AP47712 749 aa14.47□□□□□ -0.09
HMGB2-205ENST00000511316 NTRK3Q16288 839 aa14.47□□□□□ -0.09
HMGB2-205ENST00000511316 TMEM67Q5HYA8 995 aa14.47□□□□□ -0.09
HMGB2-205ENST00000511316 POTEEQ6S8J3 1075 aa14.47□□□□□ -0.09
HMGB2-205ENST00000511316 ANKRD23Q86SG2 305 aa14.47□□□□□ -0.09
HMGB2-205ENST00000511316 SPATA20Q8TB22 786 aa14.47□□□□□ -0.09
HMGB2-205ENST00000511316 ACER1Q8TDN7 264 aa14.47□□□□□ -0.09
HMGB2-205ENST00000511316 ZNF296Q8WUU4 475 aaPredicted RBP14.47□□□□□ -0.09
HMGB2-205ENST00000511316 ZCCHC17Q9NP64 241 aaKnown RBP14.47□□□□□ -0.09
HMGB2-205ENST00000511316 INCENPQ9NQS7 918 aa14.47□□□□□ -0.09
HMGB2-205ENST00000511316 EMILIN3Q9NT22 766 aa14.47□□□□□ -0.09
HMGB2-205ENST00000511316 ARPP21Q9UBL0 812 aaPredicted RBP14.47□□□□□ -0.09
HMGB2-205ENST00000511316 NFE2L3Q9Y4A8 694 aa14.47□□□□□ -0.09
HMGB2-205ENST00000511316 SRPRBQ9Y5M8 271 aaKnown RBP14.47□□□□□ -0.09
HMGB2-205ENST00000511316 ITIH6Q6UXX5 1313 aa14.47□□□□□ -0.09
HMGB2-205ENST00000511316 ROBO3Q96MS0 1386 aa14.47□□□□□ -0.09
HMGB2-205ENST00000511316 A0A1B0GTH6 734 aa14.46□□□□□ -0.09
HMGB2-205ENST00000511316 AKR1B1P15121 316 aa14.46□□□□□ -0.09
HMGB2-205ENST00000511316 BACE1P56817 501 aa14.46□□□□□ -0.09
HMGB2-205ENST00000511316 SEPT2Q15019 361 aa14.46□□□□□ -0.09
HMGB2-205ENST00000511316 ABCB5Q2M3G0 1257 aa14.46□□□□□ -0.09
HMGB2-205ENST00000511316 LONRF3Q496Y0 759 aa14.46□□□□□ -0.09
HMGB2-205ENST00000511316 TREML2Q5T2D2 321 aa14.46□□□□□ -0.09
HMGB2-205ENST00000511316 ANKRD20A12PQ8NF67 263 aa14.46□□□□□ -0.09
HMGB2-205ENST00000511316 NKX2-3Q8TAU0 364 aa14.46□□□□□ -0.09
HMGB2-205ENST00000511316 IGDCC4Q8TDY8 1250 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms