RNA–Protein interactions for RNA: ENST00000510906.5

PDPN-209, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 786 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-209ENST00000510906 MYH7P12883 1935 aa10.25□□□□□ -0.77
PDPN-209ENST00000510906 FOXP2O15409 715 aa10.24□□□□□ -0.77
PDPN-209ENST00000510906 FLOT1O75955 427 aa10.24□□□□□ -0.77
PDPN-209ENST00000510906 SGPL1O95470 568 aa10.24□□□□□ -0.77
PDPN-209ENST00000510906 XRCC5P13010 732 aaKnown RBP10.24□□□□□ -0.77
PDPN-209ENST00000510906 CCNA1P78396 465 aa10.24□□□□□ -0.77
PDPN-209ENST00000510906 CCL14Q16627 93 aa10.24□□□□□ -0.77
PDPN-209ENST00000510906 UBE2Q1Q7Z7E8 422 aa10.24□□□□□ -0.77
PDPN-209ENST00000510906 EVI5LQ96CN4 794 aa10.24□□□□□ -0.77
PDPN-209ENST00000510906 ATG4CQ96DT6 458 aa10.24□□□□□ -0.77
PDPN-209ENST00000510906 MOV10L1Q9BXT6 1211 aaKnown RBP10.24□□□□□ -0.77
PDPN-209ENST00000510906 NACAP1Q9BZK3 213 aa10.24□□□□□ -0.77
PDPN-209ENST00000510906 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.24□□□□□ -0.77
PDPN-209ENST00000510906 CWC22Q9HCG8 908 aaKnown RBP10.24□□□□□ -0.77
PDPN-209ENST00000510906 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.24□□□□□ -0.77
PDPN-209ENST00000510906 FBXO28Q9NVF7 368 aa10.24□□□□□ -0.77
PDPN-209ENST00000510906 DNAAF2Q9NVR5 837 aaKnown RBP10.24□□□□□ -0.77
PDPN-209ENST00000510906 HOXC10Q9NYD6 342 aa10.24□□□□□ -0.77
PDPN-209ENST00000510906 KIAA1024Q9UPX6 916 aa10.24□□□□□ -0.77
PDPN-209ENST00000510906 DOCK3Q8IZD9 2030 aa10.23□□□□□ -0.77
PDPN-209ENST00000510906 WDR46O15213 610 aaKnown RBP10.23□□□□□ -0.77
PDPN-209ENST00000510906 FARP2O94887 1054 aaPredicted RBP10.23□□□□□ -0.77
PDPN-209ENST00000510906 RGS2P41220 211 aa10.23□□□□□ -0.77
PDPN-209ENST00000510906 OXLD1Q5BKU9 147 aa10.23□□□□□ -0.77
PDPN-209ENST00000510906 MAP3K21Q5TCX8 1036 aa10.23□□□□□ -0.77
PDPN-209ENST00000510906 VPS53Q5VIR6 699 aa10.23□□□□□ -0.77
PDPN-209ENST00000510906 PHLDB3Q6NSJ2 640 aa10.23□□□□□ -0.77
PDPN-209ENST00000510906 CHD1LQ86WJ1 897 aa10.23□□□□□ -0.77
PDPN-209ENST00000510906 FAM200AQ8TCP9 573 aa10.23□□□□□ -0.77
PDPN-209ENST00000510906 CLP1Q92989 425 aaKnown RBP10.23□□□□□ -0.77
PDPN-209ENST00000510906 FAM227BQ96M60 508 aa10.23□□□□□ -0.77
PDPN-209ENST00000510906 KCTD15Q96SI1 283 aaPredicted RBP10.23□□□□□ -0.77
PDPN-209ENST00000510906 APBA2Q99767 749 aa10.23□□□□□ -0.77
PDPN-209ENST00000510906 NAPBQ9H115 298 aa10.23□□□□□ -0.77
PDPN-209ENST00000510906 GNEQ9Y223 722 aaKnown RBP10.23□□□□□ -0.77
PDPN-209ENST00000510906 LAMA3Q16787 3333 aa10.23□□□□□ -0.77
PDPN-209ENST00000510906 IGKV6D-41A0A0C4DH26 115 aa10.22□□□□□ -0.77
PDPN-209ENST00000510906 A0A0D9SFI3 127 aa10.22□□□□□ -0.77
PDPN-209ENST00000510906 SLC15A5A6NIM6 579 aa10.22□□□□□ -0.77
PDPN-209ENST00000510906 TFRCP02786 760 aaKnown RBP10.22□□□□□ -0.77
PDPN-209ENST00000510906 ZKSCAN1P17029 563 aaPredicted RBP10.22□□□□□ -0.77
PDPN-209ENST00000510906 NUCB1Q02818 461 aa10.22□□□□□ -0.77
PDPN-209ENST00000510906 PPARAQ07869 468 aa10.22□□□□□ -0.77
PDPN-209ENST00000510906 DPYDQ12882 1025 aa10.22□□□□□ -0.77
PDPN-209ENST00000510906 GRB14Q14449 540 aa10.22□□□□□ -0.77
PDPN-209ENST00000510906 SWI5Q1ZZU3 235 aa10.22□□□□□ -0.77
PDPN-209ENST00000510906 FAM83BQ5T0W9 1011 aa10.22□□□□□ -0.77
PDPN-209ENST00000510906 ZNF444Q8N0Y2 327 aaPredicted RBP10.22□□□□□ -0.77
PDPN-209ENST00000510906 NUP88Q99567 741 aaPredicted RBP10.22□□□□□ -0.77
PDPN-209ENST00000510906 SPATC1LQ9H0A9 340 aa10.22□□□□□ -0.77
PDPN-209ENST00000510906 GZF1Q9H116 711 aaPredicted RBP10.22□□□□□ -0.77
PDPN-209ENST00000510906 NYAP2Q9P242 653 aa10.22□□□□□ -0.77
PDPN-209ENST00000510906 CLIP2Q9UDT6 1046 aa10.22□□□□□ -0.77
PDPN-209ENST00000510906 PCDHGA11Q9Y5H2 935 aa10.22□□□□□ -0.77
PDPN-209ENST00000510906 RPTORQ8N122 1335 aa10.22□□□□□ -0.77
PDPN-209ENST00000510906 MUC3AQ02505 3323 aa10.22□□□□□ -0.77
PDPN-209ENST00000510906 PLXNB2O15031 1838 aa10.21□□□□□ -0.77
PDPN-209ENST00000510906 F5H6K3 240 aa10.21□□□□□ -0.77
PDPN-209ENST00000510906 NDUFB10O96000 172 aa10.21□□□□□ -0.77
PDPN-209ENST00000510906 ERCC3P19447 782 aa10.21□□□□□ -0.77
PDPN-209ENST00000510906 IRX6P78412 446 aaPredicted RBP10.21□□□□□ -0.77
PDPN-209ENST00000510906 KLRC3Q07444 240 aa10.21□□□□□ -0.77
PDPN-209ENST00000510906 CACNB2Q08289 660 aaPredicted RBP10.21□□□□□ -0.77
PDPN-209ENST00000510906 NMIQ13287 307 aaPredicted RBP10.21□□□□□ -0.77
PDPN-209ENST00000510906 PLS1Q14651 629 aa10.21□□□□□ -0.77
PDPN-209ENST00000510906 TMEM132BQ14DG7 1078 aa10.21□□□□□ -0.77
PDPN-209ENST00000510906 FAM47AQ5JRC9 791 aa10.21□□□□□ -0.77
PDPN-209ENST00000510906 MB21D1Q8N884 522 aa10.21□□□□□ -0.77
PDPN-209ENST00000510906 NPLOC4Q8TAT6 608 aa10.21□□□□□ -0.77
PDPN-209ENST00000510906 DIS3LQ8TF46 1054 aaKnown RBP10.21□□□□□ -0.77
PDPN-209ENST00000510906 EMID1Q96A84 441 aaPredicted RBP10.21□□□□□ -0.77
PDPN-209ENST00000510906 CEP95Q96GE4 821 aa10.21□□□□□ -0.77
PDPN-209ENST00000510906 CDK15Q96Q40 435 aa10.21□□□□□ -0.77
PDPN-209ENST00000510906 ZNF287Q9HBT7 754 aa10.21□□□□□ -0.77
PDPN-209ENST00000510906 INCENPQ9NQS7 918 aa10.21□□□□□ -0.77
PDPN-209ENST00000510906 HELLSQ9NRZ9 838 aa10.21□□□□□ -0.77
PDPN-209ENST00000510906 FLRT1Q9NZU1 646 aa10.21□□□□□ -0.77
PDPN-209ENST00000510906 PCDHB11Q9Y5F2 797 aa10.21□□□□□ -0.77
PDPN-209ENST00000510906 TACC3Q9Y6A5 838 aa10.21□□□□□ -0.77
PDPN-209ENST00000510906 IVNS1ABPQ9Y6Y0 642 aa10.21□□□□□ -0.77
PDPN-209ENST00000510906 SLC3A2P08195 630 aaKnown RBP10.2□□□□□ -0.78
PDPN-209ENST00000510906 HOXC6P09630 235 aa10.2□□□□□ -0.78
PDPN-209ENST00000510906 ADORA2AP29274 412 aa10.2□□□□□ -0.78
PDPN-209ENST00000510906 CCND3P30281 292 aaPredicted RBP10.2□□□□□ -0.78
PDPN-209ENST00000510906 TFAP4Q01664 338 aa10.2□□□□□ -0.78
PDPN-209ENST00000510906 PDE4BQ07343 736 aa10.2□□□□□ -0.78
PDPN-209ENST00000510906 USP4Q13107 963 aa10.2□□□□□ -0.78
PDPN-209ENST00000510906 INTS6LQ5JSJ4 861 aaKnown RBP10.2□□□□□ -0.78
PDPN-209ENST00000510906 ZNF589Q86UQ0 364 aaPredicted RBP10.2□□□□□ -0.78
PDPN-209ENST00000510906 NCAPG2Q86XI2 1143 aa10.2□□□□□ -0.78
PDPN-209ENST00000510906 LRRC47Q8N1G4 583 aaKnown RBP10.2□□□□□ -0.78
PDPN-209ENST00000510906 SHCBP1Q8NEM2 672 aa10.2□□□□□ -0.78
PDPN-209ENST00000510906 NEDD1Q8NHV4 660 aa10.2□□□□□ -0.78
PDPN-209ENST00000510906 RILPL2Q969X0 211 aa10.2□□□□□ -0.78
PDPN-209ENST00000510906 PAWRQ96IZ0 340 aaKnown RBP10.2□□□□□ -0.78
PDPN-209ENST00000510906 MTMR4Q9NYA4 1195 aa10.2□□□□□ -0.78
PDPN-209ENST00000510906 PPP1R9AQ9ULJ8 1098 aa10.2□□□□□ -0.78
PDPN-209ENST00000510906 ADAMTS5Q9UNA0 930 aa10.2□□□□□ -0.78
PDPN-209ENST00000510906 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.2□□□□□ -0.78
PDPN-209ENST00000510906 GREB1LQ9C091 1923 aaPredicted RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms