RNA–Protein interactions for RNA: ENST00000510756.5

CAST-233, Transcript of calpastatin, human

APPRIS ALT2 TSL 5 BASIC

Gene CAST, Length 2,310 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAST-233	ENST00000510756	DCAF8L1	A6NGE4	600 aa		13.9	□□□□□ -0.18
CAST-233	ENST00000510756	DSG3	P32926	999 aa		13.9	□□□□□ -0.18
CAST-233	ENST00000510756	TXLNA	P40222	546 aa		13.9	□□□□□ -0.18
CAST-233	ENST00000510756	FXR2	P51116	673 aa	Known RBP eCLIP	13.9	□□□□□ -0.18	4e-6	■■■□□ 16.4
CAST-233	ENST00000510756	HSD17B4	P51659	736 aa		13.9	□□□□□ -0.18
CAST-233	ENST00000510756	PDIA5	Q14554	519 aa		13.9	□□□□□ -0.18
CAST-233	ENST00000510756	COG2	Q14746	738 aa		13.9	□□□□□ -0.18
CAST-233	ENST00000510756	UVSSA	Q2YD98	709 aa		13.9	□□□□□ -0.18
CAST-233	ENST00000510756	MB21D1	Q8N884	522 aa		13.9	□□□□□ -0.18
CAST-233	ENST00000510756	RASGRP4	Q8TDF6	673 aa		13.9	□□□□□ -0.18
CAST-233	ENST00000510756	KIFC2	Q96AC6	838 aa		13.9	□□□□□ -0.18
CAST-233	ENST00000510756	MTMR9	Q96QG7	549 aa		13.9	□□□□□ -0.18
CAST-233	ENST00000510756	RAB34	Q9BZG1	259 aa		13.9	□□□□□ -0.18
CAST-233	ENST00000510756	CUEDC2	Q9H467	287 aa		13.9	□□□□□ -0.18
CAST-233	ENST00000510756	ZNF536	O15090	1300 aa		13.9	□□□□□ -0.18
CAST-233	ENST00000510756		A0A0G2JLL6	359 aa	Predicted RBP	13.9	□□□□□ -0.18
CAST-233	ENST00000510756	GCOM1	H8Y6P7	765 aa	Predicted RBP	13.9	□□□□□ -0.18
CAST-233	ENST00000510756	ADAMTS3	O15072	1205 aa		13.9	□□□□□ -0.18
CAST-233	ENST00000510756	POLR2M	P0CAP2	368 aa		13.9	□□□□□ -0.18
CAST-233	ENST00000510756	MCM7	P33993	719 aa		13.9	□□□□□ -0.18
CAST-233	ENST00000510756		Q4G0T1	1027 aa		13.9	□□□□□ -0.18
CAST-233	ENST00000510756	NOM1	Q5C9Z4	860 aa	Known RBP	13.9	□□□□□ -0.18
CAST-233	ENST00000510756	JAKMIP3	Q5VZ66	844 aa		13.9	□□□□□ -0.18
CAST-233	ENST00000510756	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	13.9	□□□□□ -0.18
CAST-233	ENST00000510756	PRRT2	Q7Z6L0	340 aa	Predicted RBP	13.9	□□□□□ -0.18
CAST-233	ENST00000510756	FRMPD4	Q14CM0	1322 aa		13.89	□□□□□ -0.19
CAST-233	ENST00000510756		A0A1B0GVL5	298 aa		13.89	□□□□□ -0.19
CAST-233	ENST00000510756	SPDYE3	A6NKU9	549 aa		13.89	□□□□□ -0.19
CAST-233	ENST00000510756	OPLAH	O14841	1288 aa		13.89	□□□□□ -0.19
CAST-233	ENST00000510756	IRF6	O14896	467 aa		13.89	□□□□□ -0.19
CAST-233	ENST00000510756	MYL1	P05976	194 aa		13.89	□□□□□ -0.19
CAST-233	ENST00000510756	REPS2	Q8NFH8	660 aa		13.89	□□□□□ -0.19
CAST-233	ENST00000510756	GTF3C2	Q8WUA4	911 aa	Predicted RBP	13.89	□□□□□ -0.19
CAST-233	ENST00000510756	CSRNP2	Q9H175	543 aa		13.89	□□□□□ -0.19
CAST-233	ENST00000510756	SCAF8	Q9UPN6	1271 aa	Known RBP	13.89	□□□□□ -0.19
CAST-233	ENST00000510756	VWA5A	O00534	786 aa		13.89	□□□□□ -0.19
CAST-233	ENST00000510756	FLOT1	O75955	427 aa		13.89	□□□□□ -0.19
CAST-233	ENST00000510756	COPB2	P35606	906 aa		13.89	□□□□□ -0.19
CAST-233	ENST00000510756	PABPC4	Q13310	644 aa	Known RBP eCLIP	13.89	□□□□□ -0.19
CAST-233	ENST00000510756	XRRA1	Q6P2D8	792 aa		13.89	□□□□□ -0.19
CAST-233	ENST00000510756	KRBA2	Q6ZNG9	492 aa		13.89	□□□□□ -0.19
CAST-233	ENST00000510756	WNT7A	O00755	349 aa		13.88	□□□□□ -0.19
CAST-233	ENST00000510756	CCNT1	O60563	726 aa	Known RBP	13.88	□□□□□ -0.19
CAST-233	ENST00000510756	LETM2	Q2VYF4	491 aa		13.88	□□□□□ -0.19
CAST-233	ENST00000510756	CT47A1	Q5JQC4	288 aa	Predicted RBP	13.88	□□□□□ -0.19
CAST-233	ENST00000510756	FASTKD5	Q7L8L6	764 aa	Known RBP	13.88	□□□□□ -0.19
CAST-233	ENST00000510756	NIPA1	Q7RTP0	329 aa		13.88	□□□□□ -0.19
CAST-233	ENST00000510756	SLFN12	Q8IYM2	578 aa		13.88	□□□□□ -0.19
CAST-233	ENST00000510756	TANGO6	Q9C0B7	1094 aa		13.88	□□□□□ -0.19
CAST-233	ENST00000510756	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	13.88	□□□□□ -0.19
CAST-233	ENST00000510756	CCPG1	Q9ULG6	757 aa		13.88	□□□□□ -0.19
CAST-233	ENST00000510756	SLC45A1	Q9Y2W3	748 aa		13.88	□□□□□ -0.19
CAST-233	ENST00000510756	EDIL3	O43854	480 aa		13.87	□□□□□ -0.19
CAST-233	ENST00000510756	ATP2B1	P20020	1258 aa		13.87	□□□□□ -0.19
CAST-233	ENST00000510756	TMEM266	Q2M3C6	531 aa		13.87	□□□□□ -0.19
CAST-233	ENST00000510756	PRAMEF18	Q5VWM3	479 aa		13.87	□□□□□ -0.19
CAST-233	ENST00000510756	IGSF22	Q8N9C0	903 aa		13.87	□□□□□ -0.19
CAST-233	ENST00000510756	FAM20A	Q96MK3	541 aa		13.87	□□□□□ -0.19
CAST-233	ENST00000510756	CLIC6	Q96NY7	704 aa		13.87	□□□□□ -0.19
CAST-233	ENST00000510756	SDF4	Q9BRK5	362 aa		13.87	□□□□□ -0.19
CAST-233	ENST00000510756	GTPBP4	Q9BZE4	634 aa	Known RBP	13.87	□□□□□ -0.19
CAST-233	ENST00000510756	TMEM260	Q9NX78	707 aa		13.87	□□□□□ -0.19
CAST-233	ENST00000510756	TUBE1	Q9UJT0	475 aa		13.87	□□□□□ -0.19
CAST-233	ENST00000510756	RPTOR	Q8N122	1335 aa		13.87	□□□□□ -0.19
CAST-233	ENST00000510756	SLFN14	P0C7P3	912 aa		13.87	□□□□□ -0.19
CAST-233	ENST00000510756	ARHGAP4	P98171	946 aa		13.87	□□□□□ -0.19
CAST-233	ENST00000510756	ZYX	Q15942	572 aa	Known RBP	13.87	□□□□□ -0.19
CAST-233	ENST00000510756	CALCRL	Q16602	461 aa		13.87	□□□□□ -0.19
CAST-233	ENST00000510756	NT5DC1	Q5TFE4	455 aa		13.87	□□□□□ -0.19
CAST-233	ENST00000510756	SASS6	Q6UVJ0	657 aa		13.87	□□□□□ -0.19
CAST-233	ENST00000510756	TRIML1	Q8N9V2	468 aa		13.87	□□□□□ -0.19
CAST-233	ENST00000510756	IQUB	Q8NA54	791 aa		13.87	□□□□□ -0.19
CAST-233	ENST00000510756	GRPEL1	Q9HAV7	217 aa		13.87	□□□□□ -0.19
CAST-233	ENST00000510756	FBXO28	Q9NVF7	368 aa		13.87	□□□□□ -0.19
CAST-233	ENST00000510756	KIAA1468	Q9P260	1216 aa		13.87	□□□□□ -0.19
CAST-233	ENST00000510756	CTDP1	Q9Y5B0	961 aa	Predicted RBP	13.87	□□□□□ -0.19
CAST-233	ENST00000510756	HMGCS2	P54868	508 aa		13.86	□□□□□ -0.19
CAST-233	ENST00000510756	UBE2S	Q16763	222 aa		13.86	□□□□□ -0.19
CAST-233	ENST00000510756	SH3RF1	Q7Z6J0	888 aa		13.86	□□□□□ -0.19
CAST-233	ENST00000510756	CCDC84	Q86UT8	332 aa	Predicted RBP	13.86	□□□□□ -0.19
CAST-233	ENST00000510756	GAS2L3	Q86XJ1	694 aa		13.86	□□□□□ -0.19
CAST-233	ENST00000510756	CLEC4D	Q8WXI8	215 aa		13.86	□□□□□ -0.19
CAST-233	ENST00000510756	KCNMB3	Q9NPA1	279 aa		13.86	□□□□□ -0.19
CAST-233	ENST00000510756	CCDC39	Q9UFE4	941 aa		13.86	□□□□□ -0.19
CAST-233	ENST00000510756	DDX25	Q9UHL0	483 aa	Known RBP	13.86	□□□□□ -0.19
CAST-233	ENST00000510756	VWA3A	A6NCI4	1184 aa		13.86	□□□□□ -0.19
CAST-233	ENST00000510756	STX1A	Q16623	288 aa		13.86	□□□□□ -0.19
CAST-233	ENST00000510756	USH1G	Q495M9	461 aa		13.86	□□□□□ -0.19
CAST-233	ENST00000510756	SYMPK	Q92797	1274 aa	Known RBP	13.86	□□□□□ -0.19
CAST-233	ENST00000510756	TMEM60	Q9H2L4	133 aa		13.86	□□□□□ -0.19
CAST-233	ENST00000510756	ANO10	Q9NW15	660 aa		13.86	□□□□□ -0.19
CAST-233	ENST00000510756	COL11A1	P12107	1806 aa	Predicted RBP	13.86	□□□□□ -0.19
CAST-233	ENST00000510756	TRPM7	Q96QT4	1865 aa		13.86	□□□□□ -0.19
CAST-233	ENST00000510756	ACTN4	O43707	911 aa	Known RBP	13.85	□□□□□ -0.19
CAST-233	ENST00000510756	BCR	P11274	1271 aa		13.85	□□□□□ -0.19
CAST-233	ENST00000510756	SET	Q01105	290 aa	Predicted RBP	13.85	□□□□□ -0.19
CAST-233	ENST00000510756	TYRO3	Q06418	890 aa		13.85	□□□□□ -0.19
CAST-233	ENST00000510756	IL17A	Q16552	155 aa		13.85	□□□□□ -0.19
CAST-233	ENST00000510756	EAPP	Q56P03	285 aa	Predicted RBP	13.85	□□□□□ -0.19
CAST-233	ENST00000510756	USP17L6P	Q6QN14	398 aa		13.85	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 156.2 ms