RNA–Protein interactions for RNA: ENST00000509692.5

SKP2-205, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2

Gene SKP2, Length 1,646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-205ENST00000509692 MCM3APO60318 1980 aa18.97■□□□□ 0.63
SKP2-205ENST00000509692 CNGA1P29973 690 aa18.96■□□□□ 0.63
SKP2-205ENST00000509692 MCM2P49736 904 aa18.96■□□□□ 0.63
SKP2-205ENST00000509692 MNX1P50219 401 aaPredicted RBP18.96■□□□□ 0.63
SKP2-205ENST00000509692 CDC37Q16543 378 aaPredicted RBP18.96■□□□□ 0.63
SKP2-205ENST00000509692 MTMR8Q96EF0 704 aa18.96■□□□□ 0.63
SKP2-205ENST00000509692 ZSCAN31Q96LW9 406 aaPredicted RBP18.96■□□□□ 0.63
SKP2-205ENST00000509692 HOMER1Q86YM7 354 aa18.96■□□□□ 0.63
SKP2-205ENST00000509692 NECAB1Q8N987 351 aa18.96■□□□□ 0.63
SKP2-205ENST00000509692 DIS3LQ8TF46 1054 aaKnown RBP18.96■□□□□ 0.63
SKP2-205ENST00000509692 PIBF1Q8WXW3 757 aa18.96■□□□□ 0.63
SKP2-205ENST00000509692 PIGSQ96S52 555 aa18.96■□□□□ 0.63
SKP2-205ENST00000509692 CNTNAP5Q8WYK1 1306 aa18.95■□□□□ 0.62
SKP2-205ENST00000509692 CPLX1O14810 134 aa18.95■□□□□ 0.62
SKP2-205ENST00000509692 CAPN2P17655 700 aa18.95■□□□□ 0.62
SKP2-205ENST00000509692 CNTN2Q02246 1040 aa18.95■□□□□ 0.62
SKP2-205ENST00000509692 FUT2Q10981 343 aa18.95■□□□□ 0.62
SKP2-205ENST00000509692 QRICH1Q2TAL8 776 aa18.95■□□□□ 0.62
SKP2-205ENST00000509692 GTF3C6Q969F1 213 aa18.95■□□□□ 0.62
SKP2-205ENST00000509692 RRP36Q96EU6 259 aaKnown RBP18.95■□□□□ 0.62
SKP2-205ENST00000509692 PAWRQ96IZ0 340 aaKnown RBP18.95■□□□□ 0.62
SKP2-205ENST00000509692 SH2B1Q9NRF2 756 aaPredicted RBP18.95■□□□□ 0.62
SKP2-205ENST00000509692 DDX20Q9UHI6 824 aaKnown RBP18.95■□□□□ 0.62
SKP2-205ENST00000509692 LCTP09848 1927 aa18.94■□□□□ 0.62
SKP2-205ENST00000509692 ZBTB5O15062 677 aa18.94■□□□□ 0.62
SKP2-205ENST00000509692 NTRK3Q16288 839 aa18.94■□□□□ 0.62
SKP2-205ENST00000509692 CPLX2Q6PUV4 134 aaKnown RBP18.94■□□□□ 0.62
SKP2-205ENST00000509692 MAMDC4Q6UXC1 1216 aa18.94■□□□□ 0.62
SKP2-205ENST00000509692 FAM133AQ8N9E0 248 aa18.94■□□□□ 0.62
SKP2-205ENST00000509692 ANKLE1Q8NAG6 615 aa18.94■□□□□ 0.62
SKP2-205ENST00000509692 PNMA6FA0A0J9YX94 578 aa18.93■□□□□ 0.62
SKP2-205ENST00000509692 SEPT4O43236 478 aa18.93■□□□□ 0.62
SKP2-205ENST00000509692 SNAI1O95863 264 aaPredicted RBP18.93■□□□□ 0.62
SKP2-205ENST00000509692 IFNAR1P17181 557 aa18.93■□□□□ 0.62
SKP2-205ENST00000509692 ANO1Q5XXA6 986 aa18.93■□□□□ 0.62
SKP2-205ENST00000509692 ZNF467Q7Z7K2 595 aaPredicted RBP18.93■□□□□ 0.62
SKP2-205ENST00000509692 CYP39A1Q9NYL5 469 aa18.93■□□□□ 0.62
SKP2-205ENST00000509692 SEC63Q9UGP8 760 aaKnown RBP18.93■□□□□ 0.62
SKP2-205ENST00000509692 CEP290O15078 2479 aa18.93■□□□□ 0.62
SKP2-205ENST00000509692 hCG_1642624A0A1W2PR95 340 aa18.92■□□□□ 0.62
SKP2-205ENST00000509692 POTEB2H3BUK9 544 aa18.92■□□□□ 0.62
SKP2-205ENST00000509692 NFIBO00712 420 aa18.92■□□□□ 0.62
SKP2-205ENST00000509692 FBXO11Q86XK2 927 aa18.92■□□□□ 0.62
SKP2-205ENST00000509692 MSL3Q8N5Y2 521 aaKnown RBP18.92■□□□□ 0.62
SKP2-205ENST00000509692 CLEC4DQ8WXI8 215 aa18.92■□□□□ 0.62
SKP2-205ENST00000509692 PHKBQ93100 1093 aa18.92■□□□□ 0.62
SKP2-205ENST00000509692 PURBQ96QR8 312 aaKnown RBP18.92■□□□□ 0.62
SKP2-205ENST00000509692 PNMA2Q9UL42 364 aa18.92■□□□□ 0.62
SKP2-205ENST00000509692 V9GY48 417 aaPredicted RBP18.92■□□□□ 0.62
SKP2-205ENST00000509692 ASTN1O14525 1302 aa18.92■□□□□ 0.62
SKP2-205ENST00000509692 PFASO15067 1338 aa18.92■□□□□ 0.62
SKP2-205ENST00000509692 SYNGAP1Q96PV0 1343 aa18.92■□□□□ 0.62
SKP2-205ENST00000509692 SOWAHBA6NEL2 793 aa18.92■□□□□ 0.62
SKP2-205ENST00000509692 MSCO60682 206 aa18.92■□□□□ 0.62
SKP2-205ENST00000509692 ZNF865P0CJ78 1059 aaPredicted RBP18.92■□□□□ 0.62
SKP2-205ENST00000509692 ST3GAL1Q11201 340 aa18.92■□□□□ 0.62
SKP2-205ENST00000509692 USH1GQ495M9 461 aa18.92■□□□□ 0.62
SKP2-205ENST00000509692 NSMFQ6X4W1 530 aa18.92■□□□□ 0.62
SKP2-205ENST00000509692 CCDC83Q8IWF9 413 aa18.92■□□□□ 0.62
SKP2-205ENST00000509692 TMX3Q96JJ7 454 aa18.92■□□□□ 0.62
SKP2-205ENST00000509692 AMNQ9BXJ7 453 aa18.92■□□□□ 0.62
SKP2-205ENST00000509692 SLC26A6Q9BXS9 759 aa18.92■□□□□ 0.62
SKP2-205ENST00000509692 NRBP1Q9UHY1 535 aa18.92■□□□□ 0.62
SKP2-205ENST00000509692 PPP1R11O60927 126 aaPredicted RBP18.91■□□□□ 0.62
SKP2-205ENST00000509692 PPFIA3O75145 1194 aa18.91■□□□□ 0.62
SKP2-205ENST00000509692 CDKL5O76039 1030 aa18.91■□□□□ 0.62
SKP2-205ENST00000509692 NECAB2Q7Z6G3 386 aa18.91■□□□□ 0.62
SKP2-205ENST00000509692 RNF26Q9BY78 433 aaPredicted RBP18.91■□□□□ 0.62
SKP2-205ENST00000509692 DDX49Q9Y6V7 483 aaKnown RBP18.91■□□□□ 0.62
SKP2-205ENST00000509692 RANBP2P49792 3224 aaKnown RBP18.91■□□□□ 0.62
SKP2-205ENST00000509692 PRPF3O43395 683 aaKnown RBP18.9■□□□□ 0.62
SKP2-205ENST00000509692 AKAP17AQ02040 695 aaKnown RBP18.9■□□□□ 0.62
SKP2-205ENST00000509692 SSRP1Q08945 709 aaKnown RBP18.9■□□□□ 0.62
SKP2-205ENST00000509692 BAATQ14032 418 aaPredicted RBP18.9■□□□□ 0.62
SKP2-205ENST00000509692 TRIM22Q8IYM9 498 aa18.9■□□□□ 0.62
SKP2-205ENST00000509692 SNX21Q969T3 373 aa18.9■□□□□ 0.62
SKP2-205ENST00000509692 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.9■□□□□ 0.62
SKP2-205ENST00000509692 RBM27Q9P2N5 1060 aaKnown RBP18.9■□□□□ 0.62
SKP2-205ENST00000509692 CNPY2Q9Y2B0 182 aa18.9■□□□□ 0.62
SKP2-205ENST00000509692 ALPK3Q96L96 1907 aa18.9■□□□□ 0.62
SKP2-205ENST00000509692 CTDNEP1O95476 244 aa18.89■□□□□ 0.62
SKP2-205ENST00000509692 TRAF1Q13077 416 aa18.89■□□□□ 0.62
SKP2-205ENST00000509692 ARMCX2Q7L311 632 aa18.89■□□□□ 0.62
SKP2-205ENST00000509692 PCDHA1Q9Y5I3 950 aa18.89■□□□□ 0.62
SKP2-205ENST00000509692 ABCB11O95342 1321 aa18.89■□□□□ 0.61
SKP2-205ENST00000509692 SLC30A10Q6XR72 485 aa18.89■□□□□ 0.61
SKP2-205ENST00000509692 KATNBL1Q9H079 304 aa18.89■□□□□ 0.61
SKP2-205ENST00000509692 PTPDC1A2A3K4 754 aa18.88■□□□□ 0.61
SKP2-205ENST00000509692 COL6A1P12109 1028 aa18.88■□□□□ 0.61
SKP2-205ENST00000509692 ACVR2BQ13705 512 aa18.88■□□□□ 0.61
SKP2-205ENST00000509692 PFKFB3Q16875 520 aaPredicted RBP18.88■□□□□ 0.61
SKP2-205ENST00000509692 NSUN7Q8NE18 718 aaKnown RBP18.88■□□□□ 0.61
SKP2-205ENST00000509692 DPF3Q92784 378 aa18.88■□□□□ 0.61
SKP2-205ENST00000509692 LENG1Q96BZ8 264 aaPredicted RBP18.88■□□□□ 0.61
SKP2-205ENST00000509692 HTATIP2Q9BUP3 242 aa18.88■□□□□ 0.61
SKP2-205ENST00000509692 C11orf49Q9H6J7 331 aa18.88■□□□□ 0.61
SKP2-205ENST00000509692 ZHX1Q9UKY1 873 aaPredicted RBP18.88■□□□□ 0.61
SKP2-205ENST00000509692 MRPL11Q9Y3B7 192 aaKnown RBP18.88■□□□□ 0.61
SKP2-205ENST00000509692 DTNBO60941 627 aa18.87■□□□□ 0.61
SKP2-205ENST00000509692 RPS6P62753 249 aaKnown RBP18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms