RNA–Protein interactions for RNA: ENST00000509388.5

RNF4-213, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-213ENST00000509388 FOSBP53539 338 aa17.04■□□□□ 0.32
RNF4-213ENST00000509388 PRMT2P55345 433 aa17.04■□□□□ 0.32
RNF4-213ENST00000509388 RPS6P62753 249 aaKnown RBP17.04■□□□□ 0.32
RNF4-213ENST00000509388 MAP2K5Q13163 448 aa17.04■□□□□ 0.32
RNF4-213ENST00000509388 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.04■□□□□ 0.32
RNF4-213ENST00000509388 FAM177A1Q8N128 213 aaPredicted RBP17.04■□□□□ 0.32
RNF4-213ENST00000509388 BICD2Q8TD16 824 aa17.04■□□□□ 0.32
RNF4-213ENST00000509388 C8orf76Q96K31 380 aa17.04■□□□□ 0.32
RNF4-213ENST00000509388 SRRDQ9UH36 339 aa17.04■□□□□ 0.32
RNF4-213ENST00000509388 PARP14Q460N5 1801 aa17.04■□□□□ 0.32
RNF4-213ENST00000509388 ESYT2A0FGR8 921 aa17.03■□□□□ 0.32
RNF4-213ENST00000509388 HOXA13P31271 388 aaPredicted RBP17.03■□□□□ 0.32
RNF4-213ENST00000509388 FLT3LGP49771 235 aa17.03■□□□□ 0.32
RNF4-213ENST00000509388 PRKCZQ05513 592 aa17.03■□□□□ 0.32
RNF4-213ENST00000509388 SAFBQ15424 915 aaKnown RBP eCLIP17.03■□□□□ 0.32
RNF4-213ENST00000509388 MORN1Q5T089 497 aa17.03■□□□□ 0.32
RNF4-213ENST00000509388 GALNT17Q6IS24 598 aa17.03■□□□□ 0.32
RNF4-213ENST00000509388 TYW1BQ6NUM6 668 aa17.03■□□□□ 0.32
RNF4-213ENST00000509388 FCHSD1Q86WN1 690 aa17.03■□□□□ 0.32
RNF4-213ENST00000509388 TEX2Q8IWB9 1127 aa17.03■□□□□ 0.32
RNF4-213ENST00000509388 RAET1EQ8TD07 263 aa17.03■□□□□ 0.32
RNF4-213ENST00000509388 TBC1D5Q92609 795 aa17.03■□□□□ 0.32
RNF4-213ENST00000509388 MPHOSPH6Q99547 160 aaKnown RBP17.03■□□□□ 0.32
RNF4-213ENST00000509388 ZMYND12Q9H0C1 365 aa17.03■□□□□ 0.32
RNF4-213ENST00000509388 BRMS1Q9HCU9 246 aa17.03■□□□□ 0.32
RNF4-213ENST00000509388 RIC8AQ9NPQ8 531 aa17.03■□□□□ 0.32
RNF4-213ENST00000509388 ADD3Q9UEY8 706 aaKnown RBP17.03■□□□□ 0.32
RNF4-213ENST00000509388 BAZ2BQ9UIF8 2168 aaKnown RBP17.02■□□□□ 0.32
RNF4-213ENST00000509388 SPDYE3A6NKU9 549 aa17.02■□□□□ 0.32
RNF4-213ENST00000509388 B4DLN1 442 aa17.02■□□□□ 0.32
RNF4-213ENST00000509388 H3BQV1 296 aa17.02■□□□□ 0.32
RNF4-213ENST00000509388 IFFO2Q5TF58 517 aa17.02■□□□□ 0.32
RNF4-213ENST00000509388 USP17L6PQ6QN14 398 aa17.02■□□□□ 0.32
RNF4-213ENST00000509388 SLC30A10Q6XR72 485 aa17.02■□□□□ 0.32
RNF4-213ENST00000509388 OTOP1Q7RTM1 612 aa17.02■□□□□ 0.32
RNF4-213ENST00000509388 SPRYD3Q8NCJ5 442 aa17.02■□□□□ 0.32
RNF4-213ENST00000509388 SYTL5Q8TDW5 730 aaPredicted RBP17.02■□□□□ 0.32
RNF4-213ENST00000509388 GJD2Q9UKL4 321 aa17.02■□□□□ 0.32
RNF4-213ENST00000509388 GABRQQ9UN88 632 aa17.02■□□□□ 0.32
RNF4-213ENST00000509388 KCNJ14Q9UNX9 436 aa17.02■□□□□ 0.32
RNF4-213ENST00000509388 COL11A1P12107 1806 aaPredicted RBP17.01■□□□□ 0.31
RNF4-213ENST00000509388 PIK3CDO00329 1044 aa17.01■□□□□ 0.31
RNF4-213ENST00000509388 OPLAHO14841 1288 aa17.01■□□□□ 0.31
RNF4-213ENST00000509388 COBLO75128 1261 aa17.01■□□□□ 0.31
RNF4-213ENST00000509388 PDCP20941 246 aa17.01■□□□□ 0.31
RNF4-213ENST00000509388 HSD17B4P51659 736 aa17.01■□□□□ 0.31
RNF4-213ENST00000509388 LARP1BQ659C4 914 aaKnown RBP17.01■□□□□ 0.31
RNF4-213ENST00000509388 MCTP2Q6DN12 878 aa17.01■□□□□ 0.31
RNF4-213ENST00000509388 CTU1Q7Z7A3 348 aaKnown RBP17.01■□□□□ 0.31
RNF4-213ENST00000509388 APBA2Q99767 749 aa17.01■□□□□ 0.31
RNF4-213ENST00000509388 EHMT1Q9H9B1 1298 aa17.01■□□□□ 0.31
RNF4-213ENST00000509388 TSHZ2Q9NRE2 1034 aa17.01■□□□□ 0.31
RNF4-213ENST00000509388 PCDHA4Q9UN74 947 aa17.01■□□□□ 0.31
RNF4-213ENST00000509388 DIS3Q9Y2L1 958 aaKnown RBP17.01■□□□□ 0.31
RNF4-213ENST00000509388 CEP350Q5VT06 3117 aa17■□□□□ 0.31
RNF4-213ENST00000509388 MEIS2O14770 477 aa17■□□□□ 0.31
RNF4-213ENST00000509388 FOSP01100 380 aaPredicted RBP17■□□□□ 0.31
RNF4-213ENST00000509388 GUCY1B3Q02153 619 aa17■□□□□ 0.31
RNF4-213ENST00000509388 CNTN2Q02246 1040 aa17■□□□□ 0.31
RNF4-213ENST00000509388 GHRHRQ02643 423 aa17■□□□□ 0.31
RNF4-213ENST00000509388 GNL2Q13823 731 aaKnown RBP17■□□□□ 0.31
RNF4-213ENST00000509388 UBE2SQ16763 222 aa17■□□□□ 0.31
RNF4-213ENST00000509388 ARHGEF16Q5VV41 709 aa17■□□□□ 0.31
RNF4-213ENST00000509388 KRT40Q6A162 431 aa17■□□□□ 0.31
RNF4-213ENST00000509388 TRMT44Q8IYL2 757 aaKnown RBP17■□□□□ 0.31
RNF4-213ENST00000509388 BLIDQ8IZY5 108 aa17■□□□□ 0.31
RNF4-213ENST00000509388 REXO1Q8N1G1 1221 aaKnown RBP17■□□□□ 0.31
RNF4-213ENST00000509388 FAM133AQ8N9E0 248 aa17■□□□□ 0.31
RNF4-213ENST00000509388 RMDN3Q96TC7 470 aa17■□□□□ 0.31
RNF4-213ENST00000509388 PHF20Q9BVI0 1012 aa17■□□□□ 0.31
RNF4-213ENST00000509388 PRDM10Q9NQV6 1147 aa17■□□□□ 0.31
RNF4-213ENST00000509388 GJB4Q9NTQ9 266 aa17■□□□□ 0.31
RNF4-213ENST00000509388 BIN2Q9UBW5 565 aaPredicted RBP17■□□□□ 0.31
RNF4-213ENST00000509388 RBM19Q9Y4C8 960 aaKnown RBP17■□□□□ 0.31
RNF4-213ENST00000509388 DNAJC25-GNG10A0A024R161 153 aa16.99■□□□□ 0.31
RNF4-213ENST00000509388 HOXC6P09630 235 aa16.99■□□□□ 0.31
RNF4-213ENST00000509388 XRCC5P13010 732 aaKnown RBP16.99■□□□□ 0.31
RNF4-213ENST00000509388 KRT2P35908 639 aa16.99■□□□□ 0.31
RNF4-213ENST00000509388 CAP1Q01518 475 aa16.99■□□□□ 0.31
RNF4-213ENST00000509388 IRF5Q13568 498 aa16.99■□□□□ 0.31
RNF4-213ENST00000509388 ZNF792Q3KQV3 632 aa16.99■□□□□ 0.31
RNF4-213ENST00000509388 JAKMIP3Q5VZ66 844 aa16.99■□□□□ 0.31
RNF4-213ENST00000509388 DNERQ8NFT8 737 aa16.99■□□□□ 0.31
RNF4-213ENST00000509388 NSUN6Q8TEA1 469 aaKnown RBP16.99■□□□□ 0.31
RNF4-213ENST00000509388 USP6NLQ92738 828 aa16.99■□□□□ 0.31
RNF4-213ENST00000509388 TAAR1Q96RJ0 339 aa16.99■□□□□ 0.31
RNF4-213ENST00000509388 ASB14A6NK59 587 aa16.98■□□□□ 0.31
RNF4-213ENST00000509388 MMP1P03956 469 aa16.98■□□□□ 0.31
RNF4-213ENST00000509388 AP3B2Q13367 1082 aa16.98■□□□□ 0.31
RNF4-213ENST00000509388 PKN2Q16513 984 aaKnown RBP16.98■□□□□ 0.31
RNF4-213ENST00000509388 FBXO18Q8NFZ0 1043 aa16.98■□□□□ 0.31
RNF4-213ENST00000509388 NPLOC4Q8TAT6 608 aa16.98■□□□□ 0.31
RNF4-213ENST00000509388 MAML3Q96JK9 1138 aa16.98■□□□□ 0.31
RNF4-213ENST00000509388 PURBQ96QR8 312 aaKnown RBP16.98■□□□□ 0.31
RNF4-213ENST00000509388 PCDHA6Q9UN73 950 aa16.98■□□□□ 0.31
RNF4-213ENST00000509388 PTPN22Q9Y2R2 807 aa16.98■□□□□ 0.31
RNF4-213ENST00000509388 PCDHA8Q9Y5H6 950 aa16.98■□□□□ 0.31
RNF4-213ENST00000509388 SOWAHBA6NEL2 793 aa16.97■□□□□ 0.31
RNF4-213ENST00000509388 ADCY3O60266 1144 aa16.97■□□□□ 0.31
RNF4-213ENST00000509388 EIF2AK2P19525 551 aaKnown RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms