RNA–Protein interactions for RNA: ENST00000509317.5

COPS4-207, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 5

Gene COPS4, Length 878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-207ENST00000509317 TMEM31Q5JXX7 168 aa12.14□□□□□ -0.47
COPS4-207ENST00000509317 IQSEC1Q6DN90 963 aa12.14□□□□□ -0.47
COPS4-207ENST00000509317 ZSCAN25Q6NSZ9 544 aa12.14□□□□□ -0.47
COPS4-207ENST00000509317 RPAP2Q8IXW5 612 aaPredicted RBP12.14□□□□□ -0.47
COPS4-207ENST00000509317 SEC62Q99442 399 aaKnown RBP12.14□□□□□ -0.47
COPS4-207ENST00000509317 LPXNO60711 386 aa12.13□□□□□ -0.47
COPS4-207ENST00000509317 TSPY3P0CV98 308 aa12.13□□□□□ -0.47
COPS4-207ENST00000509317 TSPY8P0CW00 308 aa12.13□□□□□ -0.47
COPS4-207ENST00000509317 SLC1A4P43007 532 aa12.13□□□□□ -0.47
COPS4-207ENST00000509317 PURAQ00577 322 aaKnown RBP12.13□□□□□ -0.47
COPS4-207ENST00000509317 NBPF20Q3BBV1 942 aa12.13□□□□□ -0.47
COPS4-207ENST00000509317 HERC6Q8IVU3 1022 aa12.13□□□□□ -0.47
COPS4-207ENST00000509317 NEDD1Q8NHV4 660 aa12.13□□□□□ -0.47
COPS4-207ENST00000509317 GDPD5Q8WTR4 605 aa12.13□□□□□ -0.47
COPS4-207ENST00000509317 STAG1Q8WVM7 1258 aa12.13□□□□□ -0.47
COPS4-207ENST00000509317 COPS5Q92905 334 aa12.13□□□□□ -0.47
COPS4-207ENST00000509317 WDR11Q9BZH6 1224 aa12.13□□□□□ -0.47
COPS4-207ENST00000509317 FTOQ9C0B1 505 aaKnown RBP eCLIP12.13□□□□□ -0.47
COPS4-207ENST00000509317 MTUS1Q9ULD2 1270 aa12.13□□□□□ -0.47
COPS4-207ENST00000509317 PRR12Q9ULL5 1215 aa12.13□□□□□ -0.47
COPS4-207ENST00000509317 HCN4Q9Y3Q4 1203 aa12.13□□□□□ -0.47
COPS4-207ENST00000509317 SCN5AQ14524 2016 aa12.13□□□□□ -0.47
COPS4-207ENST00000509317 NFIBO00712 420 aa12.12□□□□□ -0.47
COPS4-207ENST00000509317 RNF113AO15541 343 aaKnown RBP12.12□□□□□ -0.47
COPS4-207ENST00000509317 POU3F3P20264 500 aaPredicted RBP12.12□□□□□ -0.47
COPS4-207ENST00000509317 SLC16A2P36021 539 aa12.12□□□□□ -0.47
COPS4-207ENST00000509317 BAATQ14032 418 aaPredicted RBP12.12□□□□□ -0.47
COPS4-207ENST00000509317 DUSP28Q4G0W2 176 aa12.12□□□□□ -0.47
COPS4-207ENST00000509317 TTBK2Q6IQ55 1244 aa12.12□□□□□ -0.47
COPS4-207ENST00000509317 GIMAP6Q6P9H5 292 aa12.12□□□□□ -0.47
COPS4-207ENST00000509317 IFNL3Q8IZI9 196 aa12.12□□□□□ -0.47
COPS4-207ENST00000509317 KBTBD3Q8NAB2 608 aa12.12□□□□□ -0.47
COPS4-207ENST00000509317 APPBP2Q92624 585 aa12.12□□□□□ -0.47
COPS4-207ENST00000509317 HLA-CQ95604 372 aa12.12□□□□□ -0.47
COPS4-207ENST00000509317 CCPG1Q9ULG6 757 aa12.12□□□□□ -0.47
COPS4-207ENST00000509317 MYH4Q9Y623 1939 aa12.11□□□□□ -0.47
COPS4-207ENST00000509317 PLIN4Q96Q06 1357 aa12.11□□□□□ -0.47
COPS4-207ENST00000509317 IQCF3P0C7M6 154 aa12.11□□□□□ -0.47
COPS4-207ENST00000509317 TCTN1Q2MV58 587 aa12.11□□□□□ -0.47
COPS4-207ENST00000509317 SLC30A10Q6XR72 485 aa12.11□□□□□ -0.47
COPS4-207ENST00000509317 FAM160B2Q86V87 743 aa12.11□□□□□ -0.47
COPS4-207ENST00000509317 OR6J1Q8NGC5 347 aa12.11□□□□□ -0.47
COPS4-207ENST00000509317 CHURC1Q8WUH1 139 aa12.11□□□□□ -0.47
COPS4-207ENST00000509317 GMCL1Q96IK5 515 aa12.11□□□□□ -0.47
COPS4-207ENST00000509317 LRRCC1Q9C099 1032 aa12.11□□□□□ -0.47
COPS4-207ENST00000509317 VTA1Q9NP79 307 aa12.11□□□□□ -0.47
COPS4-207ENST00000509317 IL17RBQ9NRM6 502 aa12.11□□□□□ -0.47
COPS4-207ENST00000509317 ECHDC1Q9NTX5 307 aa12.11□□□□□ -0.47
COPS4-207ENST00000509317 STX8Q9UNK0 236 aa12.11□□□□□ -0.47
COPS4-207ENST00000509317 LCTP09848 1927 aa12.1□□□□□ -0.47
COPS4-207ENST00000509317 MYH7P12883 1935 aa12.1□□□□□ -0.47
COPS4-207ENST00000509317 PFKMP08237 780 aa12.1□□□□□ -0.47
COPS4-207ENST00000509317 ALDH5A1P51649 535 aaPredicted RBP12.1□□□□□ -0.47
COPS4-207ENST00000509317 DEFB103AP81534 67 aa12.1□□□□□ -0.47
COPS4-207ENST00000509317 CTDSPL2Q05D32 466 aa12.1□□□□□ -0.47
COPS4-207ENST00000509317 GPNMBQ14956 572 aa12.1□□□□□ -0.47
COPS4-207ENST00000509317 CCDC96Q2M329 555 aa12.1□□□□□ -0.47
COPS4-207ENST00000509317 TKFCQ3LXA3 575 aa12.1□□□□□ -0.47
COPS4-207ENST00000509317 MORC4Q8TE76 937 aa12.1□□□□□ -0.47
COPS4-207ENST00000509317 SLC9A7Q96T83 725 aa12.1□□□□□ -0.47
COPS4-207ENST00000509317 MTG1Q9BT17 334 aaPredicted RBP12.1□□□□□ -0.47
COPS4-207ENST00000509317 POLR3EQ9NVU0 708 aa12.1□□□□□ -0.47
COPS4-207ENST00000509317 COG5Q9UP83 839 aa12.1□□□□□ -0.47
COPS4-207ENST00000509317 Q9Y3F1 56 aa12.1□□□□□ -0.47
COPS4-207ENST00000509317 MUC6Q6W4X9 2439 aa12.1□□□□□ -0.47
COPS4-207ENST00000509317 WDFY4Q6ZS81 3184 aa12.1□□□□□ -0.47
COPS4-207ENST00000509317 PTPDC1A2A3K4 754 aa12.09□□□□□ -0.47
COPS4-207ENST00000509317 PATL2C9JE40 543 aaKnown RBP12.09□□□□□ -0.47
COPS4-207ENST00000509317 SUPT20HL2P0C7V6 817 aa12.09□□□□□ -0.47
COPS4-207ENST00000509317 FDX1P10109 184 aa12.09□□□□□ -0.47
COPS4-207ENST00000509317 ACTN1P12814 892 aa12.09□□□□□ -0.47
COPS4-207ENST00000509317 CALML3P27482 149 aa12.09□□□□□ -0.47
COPS4-207ENST00000509317 PPARAQ07869 468 aa12.09□□□□□ -0.47
COPS4-207ENST00000509317 C20orf194Q5TEA3 1177 aa12.09□□□□□ -0.47
COPS4-207ENST00000509317 RCSD1Q6JBY9 416 aa12.09□□□□□ -0.47
COPS4-207ENST00000509317 FAM117BQ6P1L5 589 aa12.09□□□□□ -0.47
COPS4-207ENST00000509317 ALYREFQ86V81 257 aaKnown RBP12.09□□□□□ -0.47
COPS4-207ENST00000509317 CTAGE1Q96RT6 745 aa12.09□□□□□ -0.47
COPS4-207ENST00000509317 GPHNQ9NQX3 736 aaPredicted RBP12.09□□□□□ -0.47
COPS4-207ENST00000509317 SYNPO2Q9UMS6 1093 aa12.09□□□□□ -0.47
COPS4-207ENST00000509317 PIEZO1Q92508 2521 aa12.09□□□□□ -0.47
COPS4-207ENST00000509317 FRMPD2Q68DX3 1309 aaPredicted RBP12.09□□□□□ -0.47
COPS4-207ENST00000509317 BRWD1Q9NSI6 2320 aa12.08□□□□□ -0.48
COPS4-207ENST00000509317 COL4A4P53420 1690 aaPredicted RBP12.08□□□□□ -0.48
COPS4-207ENST00000509317 FOXP2O15409 715 aa12.08□□□□□ -0.48
COPS4-207ENST00000509317 ARIH2O95376 493 aa12.08□□□□□ -0.48
COPS4-207ENST00000509317 ICAM1P05362 532 aa12.08□□□□□ -0.48
COPS4-207ENST00000509317 CPT1AP50416 773 aa12.08□□□□□ -0.48
COPS4-207ENST00000509317 WDR5P61964 334 aaKnown RBP12.08□□□□□ -0.48
COPS4-207ENST00000509317 PDE4BQ07343 736 aa12.08□□□□□ -0.48
COPS4-207ENST00000509317 RETREG2Q8NC44 543 aa12.08□□□□□ -0.48
COPS4-207ENST00000509317 CLEC4DQ8WXI8 215 aa12.08□□□□□ -0.48
COPS4-207ENST00000509317 SEZ6LQ9BYH1 1024 aa12.08□□□□□ -0.48
COPS4-207ENST00000509317 ZNF287Q9HBT7 754 aa12.08□□□□□ -0.48
COPS4-207ENST00000509317 GPCPD1Q9NPB8 672 aa12.08□□□□□ -0.48
COPS4-207ENST00000509317 DDX19BQ9UMR2 479 aa12.08□□□□□ -0.48
COPS4-207ENST00000509317 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.08□□□□□ -0.48
COPS4-207ENST00000509317 TET1Q8NFU7 2136 aa12.08□□□□□ -0.48
COPS4-207ENST00000509317 RBM47A0AV96 593 aaKnown RBP12.07□□□□□ -0.48
COPS4-207ENST00000509317 TSPY2A6NKD2 308 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms