RNA–Protein interactions for RNA: ENST00000509206.1

RNF4-211, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-211ENST00000509206 SAP30BPQ9UHR5 308 aaKnown RBP4.72□□□□□ -1.65
RNF4-211ENST00000509206 PALD1Q9ULE6 856 aa4.72□□□□□ -1.65
RNF4-211ENST00000509206 ADAMTS8Q9UP79 889 aa4.72□□□□□ -1.65
RNF4-211ENST00000509206 NOD1Q9Y239 953 aa4.72□□□□□ -1.65
RNF4-211ENST00000509206 CTDP1Q9Y5B0 961 aaPredicted RBP4.72□□□□□ -1.65
RNF4-211ENST00000509206 LOC285556D6RIA3 1793 aa4.72□□□□□ -1.65
RNF4-211ENST00000509206 RIF1Q5UIP0 2472 aaKnown RBP4.72□□□□□ -1.65
RNF4-211ENST00000509206 CHD8Q9HCK8 2581 aa4.72□□□□□ -1.65
RNF4-211ENST00000509206 PHIPQ8WWQ0 1821 aa4.72□□□□□ -1.65
RNF4-211ENST00000509206 CHD9Q3L8U1 2897 aa4.71□□□□□ -1.65
RNF4-211ENST00000509206 B4GALT4O60513 344 aa4.71□□□□□ -1.66
RNF4-211ENST00000509206 BAIAP3O94812 1187 aa4.71□□□□□ -1.66
RNF4-211ENST00000509206 NBPF7P0C2Y1 421 aaPredicted RBP4.71□□□□□ -1.66
RNF4-211ENST00000509206 CST5P28325 142 aaPredicted RBP4.71□□□□□ -1.66
RNF4-211ENST00000509206 COPB2P35606 906 aa4.71□□□□□ -1.66
RNF4-211ENST00000509206 STAT3P40763 770 aa4.71□□□□□ -1.66
RNF4-211ENST00000509206 GJA9P57773 515 aa4.71□□□□□ -1.66
RNF4-211ENST00000509206 ZXDAP98168 799 aa4.71□□□□□ -1.66
RNF4-211ENST00000509206 BEX3Q00994 111 aa4.71□□□□□ -1.66
RNF4-211ENST00000509206 GUCA2AQ02747 115 aa4.71□□□□□ -1.66
RNF4-211ENST00000509206 ACVR2BQ13705 512 aa4.71□□□□□ -1.66
RNF4-211ENST00000509206 PUM1Q14671 1186 aaKnown RBP eCLIP4.71□□□□□ -1.66
RNF4-211ENST00000509206 RALBP1Q15311 655 aa4.71□□□□□ -1.66
RNF4-211ENST00000509206 SHROOM1Q2M3G4 852 aaPredicted RBP4.71□□□□□ -1.66
RNF4-211ENST00000509206 ZNF792Q3KQV3 632 aa4.71□□□□□ -1.66
RNF4-211ENST00000509206 CCDC144BQ3MJ40 725 aa4.71□□□□□ -1.66
RNF4-211ENST00000509206 CCDC102BQ68D86 513 aa4.71□□□□□ -1.66
RNF4-211ENST00000509206 FAM117BQ6P1L5 589 aa4.71□□□□□ -1.66
RNF4-211ENST00000509206 WWC1Q8IX03 1113 aa4.71□□□□□ -1.66
RNF4-211ENST00000509206 CCER1Q8TC90 406 aaPredicted RBP4.71□□□□□ -1.66
RNF4-211ENST00000509206 ACER1Q8TDN7 264 aa4.71□□□□□ -1.66
RNF4-211ENST00000509206 MRPL38Q96DV4 380 aaKnown RBP4.71□□□□□ -1.66
RNF4-211ENST00000509206 CCDC97Q96F63 343 aaPredicted RBP4.71□□□□□ -1.66
RNF4-211ENST00000509206 RAD9AQ99638 391 aa4.71□□□□□ -1.66
RNF4-211ENST00000509206 ABHD16BQ9H3Z7 469 aa4.71□□□□□ -1.66
RNF4-211ENST00000509206 AATFQ9NY61 560 aaKnown RBP eCLIP4.71□□□□□ -1.66
RNF4-211ENST00000509206 SMCHD1A6NHR9 2005 aa4.71□□□□□ -1.66
RNF4-211ENST00000509206 PKD1L2Q7Z442 2459 aa4.7□□□□□ -1.66
RNF4-211ENST00000509206 ZNF318Q5VUA4 2279 aa4.7□□□□□ -1.66
RNF4-211ENST00000509206 A0A0G2JMZ2 1700 aa4.7□□□□□ -1.66
RNF4-211ENST00000509206 LCHNA4D1U4 455 aa4.7□□□□□ -1.66
RNF4-211ENST00000509206 DYNC1LI2O43237 492 aaPredicted RBP4.7□□□□□ -1.66
RNF4-211ENST00000509206 ARHGEF15O94989 841 aa4.7□□□□□ -1.66
RNF4-211ENST00000509206 SNAI1O95863 264 aaPredicted RBP4.7□□□□□ -1.66
RNF4-211ENST00000509206 CYP2C9P11712 490 aa4.7□□□□□ -1.66
RNF4-211ENST00000509206 NBL1P41271 181 aa4.7□□□□□ -1.66
RNF4-211ENST00000509206 ABL2P42684 1182 aa4.7□□□□□ -1.66
RNF4-211ENST00000509206 USP5P45974 858 aa4.7□□□□□ -1.66
RNF4-211ENST00000509206 VCPP55072 806 aaKnown RBP4.7□□□□□ -1.66
RNF4-211ENST00000509206 PPP4CP60510 307 aa4.7□□□□□ -1.66
RNF4-211ENST00000509206 ERVK-21P61565 698 aa4.7□□□□□ -1.66
RNF4-211ENST00000509206 TNFAIP2Q03169 654 aa4.7□□□□□ -1.66
RNF4-211ENST00000509206 SIGLEC14Q08ET2 396 aa4.7□□□□□ -1.66
RNF4-211ENST00000509206 BFSP2Q13515 415 aa4.7□□□□□ -1.66
RNF4-211ENST00000509206 ACAP1Q15027 740 aa4.7□□□□□ -1.66
RNF4-211ENST00000509206 SMAD2Q15796 467 aaKnown RBP4.7□□□□□ -1.66
RNF4-211ENST00000509206 FSCN1Q16658 493 aaKnown RBP4.7□□□□□ -1.66
RNF4-211ENST00000509206 TCEAL5Q5H9L2 206 aa4.7□□□□□ -1.66
RNF4-211ENST00000509206 FAM47CQ5HY64 1035 aa4.7□□□□□ -1.66
RNF4-211ENST00000509206 NAA16Q6N069 864 aaPredicted RBP4.7□□□□□ -1.66
RNF4-211ENST00000509206 TBC1D9Q6ZT07 1266 aa4.7□□□□□ -1.66
RNF4-211ENST00000509206 FRMD5Q7Z6J6 570 aa4.7□□□□□ -1.66
RNF4-211ENST00000509206 TTC6Q86TZ1 520 aa4.7□□□□□ -1.66
RNF4-211ENST00000509206 RIOX2Q8IUF8 465 aa4.7□□□□□ -1.66
RNF4-211ENST00000509206 NSUN4Q96CB9 384 aaKnown RBP4.7□□□□□ -1.66
RNF4-211ENST00000509206 RMDN1Q96DB5 314 aa4.7□□□□□ -1.66
RNF4-211ENST00000509206 ATG4CQ96DT6 458 aa4.7□□□□□ -1.66
RNF4-211ENST00000509206 AGBL1Q96MI9 1066 aa4.7□□□□□ -1.66
RNF4-211ENST00000509206 NEUROD6Q96NK8 337 aa4.7□□□□□ -1.66
RNF4-211ENST00000509206 NSUN3Q9H649 340 aaKnown RBP4.7□□□□□ -1.66
RNF4-211ENST00000509206 IGFLR1Q9H665 355 aa4.7□□□□□ -1.66
RNF4-211ENST00000509206 SH2D4AQ9H788 454 aa4.7□□□□□ -1.66
RNF4-211ENST00000509206 SERPINB13Q9UIV8 391 aa4.7□□□□□ -1.66
RNF4-211ENST00000509206 TSR3Q9UJK0 312 aaKnown RBP4.7□□□□□ -1.66
RNF4-211ENST00000509206 PCDHGC3Q9UN70 934 aa4.7□□□□□ -1.66
RNF4-211ENST00000509206 BRWD1Q9NSI6 2320 aa4.7□□□□□ -1.66
RNF4-211ENST00000509206 USP34Q70CQ2 3546 aa4.7□□□□□ -1.66
RNF4-211ENST00000509206 FAM186AA6NE01 2351 aa4.7□□□□□ -1.66
RNF4-211ENST00000509206 TPRP12270 2363 aaKnown RBP4.7□□□□□ -1.66
RNF4-211ENST00000509206 CHD7Q9P2D1 2997 aa4.7□□□□□ -1.66
RNF4-211ENST00000509206 TNKSO95271 1327 aa4.7□□□□□ -1.66
RNF4-211ENST00000509206 ROBO3Q96MS0 1386 aa4.69□□□□□ -1.66
RNF4-211ENST00000509206 LINC01553A4QN01 128 aa4.69□□□□□ -1.66
RNF4-211ENST00000509206 MBTPS2O43462 519 aa4.69□□□□□ -1.66
RNF4-211ENST00000509206 CFHP08603 1231 aa4.69□□□□□ -1.66
RNF4-211ENST00000509206 IQCF3P0C7M6 154 aa4.69□□□□□ -1.66
RNF4-211ENST00000509206 IL15P40933 162 aaPredicted RBP4.69□□□□□ -1.66
RNF4-211ENST00000509206 MCAMP43121 646 aa4.69□□□□□ -1.66
RNF4-211ENST00000509206 CHMP4BP1P59074 171 aa4.69□□□□□ -1.66
RNF4-211ENST00000509206 TIMM10P62072 90 aa4.69□□□□□ -1.66
RNF4-211ENST00000509206 PSMC6P62333 389 aa4.69□□□□□ -1.66
RNF4-211ENST00000509206 FUT2Q10981 343 aa4.69□□□□□ -1.66
RNF4-211ENST00000509206 SMAD4Q13485 552 aaKnown RBP4.69□□□□□ -1.66
RNF4-211ENST00000509206 GPM6BQ13491 265 aa4.69□□□□□ -1.66
RNF4-211ENST00000509206 RASGRF1Q13972 1273 aa4.69□□□□□ -1.66
RNF4-211ENST00000509206 MVPQ14764 893 aaKnown RBP4.69□□□□□ -1.66
RNF4-211ENST00000509206 TMEM132BQ14DG7 1078 aa4.69□□□□□ -1.66
RNF4-211ENST00000509206 RABL6Q3YEC7 729 aaPredicted RBP4.69□□□□□ -1.66
RNF4-211ENST00000509206 BRDTQ58F21 947 aaPredicted RBP4.69□□□□□ -1.66
RNF4-211ENST00000509206 NYAP1Q6ZVC0 841 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms