RNA–Protein interactions for RNA: ENST00000508848.5

POLR2J3-213, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 1,030 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-213ENST00000508848 Q9Y3F1 56 aa12.28□□□□□ -0.44
POLR2J3-213ENST00000508848 PCDHA1Q9Y5I3 950 aa12.28□□□□□ -0.44
POLR2J3-213ENST00000508848 KIAA1217Q5T5P2 1943 aa12.27□□□□□ -0.44
POLR2J3-213ENST00000508848 hCG_1984214I3L0E3 225 aa12.27□□□□□ -0.45
POLR2J3-213ENST00000508848 PIK3CDO00329 1044 aa12.27□□□□□ -0.45
POLR2J3-213ENST00000508848 NFIBO00712 420 aa12.27□□□□□ -0.45
POLR2J3-213ENST00000508848 DHX16O60231 1041 aaKnown RBP12.27□□□□□ -0.45
POLR2J3-213ENST00000508848 ZNF865P0CJ78 1059 aaPredicted RBP12.27□□□□□ -0.45
POLR2J3-213ENST00000508848 SNAP25P60880 206 aa12.27□□□□□ -0.45
POLR2J3-213ENST00000508848 CNTN2Q02246 1040 aa12.27□□□□□ -0.45
POLR2J3-213ENST00000508848 MLLT1Q03111 559 aaPredicted RBP12.27□□□□□ -0.45
POLR2J3-213ENST00000508848 ANKRD1Q15327 319 aa12.27□□□□□ -0.45
POLR2J3-213ENST00000508848 C8orf34Q49A92 452 aa12.27□□□□□ -0.45
POLR2J3-213ENST00000508848 IQSEC1Q6DN90 963 aa12.27□□□□□ -0.45
POLR2J3-213ENST00000508848 ZNF713Q8N859 430 aaPredicted RBP12.27□□□□□ -0.45
POLR2J3-213ENST00000508848 ARRDC4Q8NCT1 418 aa12.27□□□□□ -0.45
POLR2J3-213ENST00000508848 TRPV1Q8NER1 839 aa12.27□□□□□ -0.45
POLR2J3-213ENST00000508848 NUP133Q8WUM0 1156 aa12.27□□□□□ -0.45
POLR2J3-213ENST00000508848 SHISA4Q96DD7 197 aa12.27□□□□□ -0.45
POLR2J3-213ENST00000508848 KATNBL1Q9H079 304 aa12.27□□□□□ -0.45
POLR2J3-213ENST00000508848 CPVLQ9H3G5 476 aa12.27□□□□□ -0.45
POLR2J3-213ENST00000508848 HOMER2Q9NSB8 354 aa12.27□□□□□ -0.45
POLR2J3-213ENST00000508848 FAM217BQ9NTX9 383 aaPredicted RBP12.27□□□□□ -0.45
POLR2J3-213ENST00000508848 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.27□□□□□ -0.45
POLR2J3-213ENST00000508848 RBM47A0AV96 593 aaKnown RBP12.26□□□□□ -0.45
POLR2J3-213ENST00000508848 OPLAHO14841 1288 aa12.26□□□□□ -0.45
POLR2J3-213ENST00000508848 PPP1R11O60927 126 aaPredicted RBP12.26□□□□□ -0.45
POLR2J3-213ENST00000508848 DUSP11O75319 330 aaKnown RBP12.26□□□□□ -0.45
POLR2J3-213ENST00000508848 TFRCP02786 760 aaKnown RBP12.26□□□□□ -0.45
POLR2J3-213ENST00000508848 AKR1A1P14550 325 aa12.26□□□□□ -0.45
POLR2J3-213ENST00000508848 CCND3P30281 292 aaPredicted RBP12.26□□□□□ -0.45
POLR2J3-213ENST00000508848 SLC4A3P48751 1232 aa12.26□□□□□ -0.45
POLR2J3-213ENST00000508848 SOX10P56693 466 aa12.26□□□□□ -0.45
POLR2J3-213ENST00000508848 FGD1P98174 961 aa12.26□□□□□ -0.45
POLR2J3-213ENST00000508848 ACVR2BQ13705 512 aa12.26□□□□□ -0.45
POLR2J3-213ENST00000508848 RTN1Q16799 776 aa12.26□□□□□ -0.45
POLR2J3-213ENST00000508848 NSMFQ6X4W1 530 aa12.26□□□□□ -0.45
POLR2J3-213ENST00000508848 ARMCX2Q7L311 632 aa12.26□□□□□ -0.45
POLR2J3-213ENST00000508848 CCDC144CPQ8IYA2 1237 aa12.26□□□□□ -0.45
POLR2J3-213ENST00000508848 NSUN6Q8TEA1 469 aaKnown RBP12.26□□□□□ -0.45
POLR2J3-213ENST00000508848 CHMP4CQ96CF2 233 aa12.26□□□□□ -0.45
POLR2J3-213ENST00000508848 PIGSQ96S52 555 aa12.26□□□□□ -0.45
POLR2J3-213ENST00000508848 LRRC2Q9BYS8 371 aa12.26□□□□□ -0.45
POLR2J3-213ENST00000508848 GLT8D2Q9H1C3 349 aa12.26□□□□□ -0.45
POLR2J3-213ENST00000508848 VTA1Q9NP79 307 aa12.26□□□□□ -0.45
POLR2J3-213ENST00000508848 SEC63Q9UGP8 760 aaKnown RBP12.26□□□□□ -0.45
POLR2J3-213ENST00000508848 FAM184BQ9ULE4 1060 aa12.26□□□□□ -0.45
POLR2J3-213ENST00000508848 KLF18A0A0U1RQI7 1052 aa12.25□□□□□ -0.45
POLR2J3-213ENST00000508848 PDIA3P30101 505 aaKnown RBP12.25□□□□□ -0.45
POLR2J3-213ENST00000508848 ALDH5A1P51649 535 aaPredicted RBP12.25□□□□□ -0.45
POLR2J3-213ENST00000508848 USH1GQ495M9 461 aa12.25□□□□□ -0.45
POLR2J3-213ENST00000508848 SYTL5Q8TDW5 730 aaPredicted RBP12.25□□□□□ -0.45
POLR2J3-213ENST00000508848 BRF1Q92994 677 aa12.25□□□□□ -0.45
POLR2J3-213ENST00000508848 TSEN34Q9BSV6 310 aaKnown RBP12.25□□□□□ -0.45
POLR2J3-213ENST00000508848 ASTN1O14525 1302 aa12.25□□□□□ -0.45
POLR2J3-213ENST00000508848 CEP290O15078 2479 aa12.25□□□□□ -0.45
POLR2J3-213ENST00000508848 PTPDC1A2A3K4 754 aa12.24□□□□□ -0.45
POLR2J3-213ENST00000508848 DNM1LO00429 736 aa12.24□□□□□ -0.45
POLR2J3-213ENST00000508848 PRPF3O43395 683 aaKnown RBP12.24□□□□□ -0.45
POLR2J3-213ENST00000508848 STAM2O75886 525 aa12.24□□□□□ -0.45
POLR2J3-213ENST00000508848 PLEKHA8P1O95397 391 aa12.24□□□□□ -0.45
POLR2J3-213ENST00000508848 COL6A1P12109 1028 aa12.24□□□□□ -0.45
POLR2J3-213ENST00000508848 IFNAR1P17181 557 aa12.24□□□□□ -0.45
POLR2J3-213ENST00000508848 RBM25P49756 843 aaKnown RBP12.24□□□□□ -0.45
POLR2J3-213ENST00000508848 MNX1P50219 401 aaPredicted RBP12.24□□□□□ -0.45
POLR2J3-213ENST00000508848 TOB2Q14106 344 aaPredicted RBP12.24□□□□□ -0.45
POLR2J3-213ENST00000508848 NTRK3Q16288 839 aa12.24□□□□□ -0.45
POLR2J3-213ENST00000508848 MCTP2Q6DN12 878 aa12.24□□□□□ -0.45
POLR2J3-213ENST00000508848 PPP1R18Q6NYC8 613 aa12.24□□□□□ -0.45
POLR2J3-213ENST00000508848 XRRA1Q6P2D8 792 aa12.24□□□□□ -0.45
POLR2J3-213ENST00000508848 NECAB2Q7Z6G3 386 aa12.24□□□□□ -0.45
POLR2J3-213ENST00000508848 MICU3Q86XE3 530 aa12.24□□□□□ -0.45
POLR2J3-213ENST00000508848 MYL10Q9BUA6 226 aa12.24□□□□□ -0.45
POLR2J3-213ENST00000508848 PDRG1Q9NUG6 133 aa12.24□□□□□ -0.45
POLR2J3-213ENST00000508848 FRMPD4Q14CM0 1322 aa12.23□□□□□ -0.45
POLR2J3-213ENST00000508848 GOLGA8AA7E2F4 631 aa12.23□□□□□ -0.45
POLR2J3-213ENST00000508848 GOLGA8BA8MQT2 603 aa12.23□□□□□ -0.45
POLR2J3-213ENST00000508848 GCOM1H8Y6P7 765 aaPredicted RBP12.23□□□□□ -0.45
POLR2J3-213ENST00000508848 NKRFO15226 690 aaKnown RBP eCLIP12.23□□□□□ -0.45
POLR2J3-213ENST00000508848 EIF3JO75822 258 aaKnown RBP12.23□□□□□ -0.45
POLR2J3-213ENST00000508848 SEC24BO95487 1268 aa12.23□□□□□ -0.45
POLR2J3-213ENST00000508848 POLR2MP0CAP2 368 aa12.23□□□□□ -0.45
POLR2J3-213ENST00000508848 TGFB3P10600 412 aa12.23□□□□□ -0.45
POLR2J3-213ENST00000508848 RARBP10826 455 aa12.23□□□□□ -0.45
POLR2J3-213ENST00000508848 CST5P28325 142 aaPredicted RBP12.23□□□□□ -0.45
POLR2J3-213ENST00000508848 CNGA1P29973 690 aa12.23□□□□□ -0.45
POLR2J3-213ENST00000508848 ADD1P35611 737 aaKnown RBP12.23□□□□□ -0.45
POLR2J3-213ENST00000508848 METAP2P50579 478 aaKnown RBP eCLIP12.23□□□□□ -0.45
POLR2J3-213ENST00000508848 APOBRQ0VD83 1088 aa12.23□□□□□ -0.45
POLR2J3-213ENST00000508848 CCDC144BQ3MJ40 725 aa12.23□□□□□ -0.45
POLR2J3-213ENST00000508848 TAPT1Q6NXT6 567 aa12.23□□□□□ -0.45
POLR2J3-213ENST00000508848 KCNV1Q6PIU1 500 aa12.23□□□□□ -0.45
POLR2J3-213ENST00000508848 VSIG10LQ86VR7 867 aa12.23□□□□□ -0.45
POLR2J3-213ENST00000508848 TBC1D5Q92609 795 aa12.23□□□□□ -0.45
POLR2J3-213ENST00000508848 TCEANC2Q96MN5 208 aa12.23□□□□□ -0.45
POLR2J3-213ENST00000508848 RMDN3Q96TC7 470 aa12.23□□□□□ -0.45
POLR2J3-213ENST00000508848 HTATIP2Q9BUP3 242 aa12.23□□□□□ -0.45
POLR2J3-213ENST00000508848 RNF26Q9BY78 433 aaPredicted RBP12.23□□□□□ -0.45
POLR2J3-213ENST00000508848 SEZ6LQ9BYH1 1024 aa12.23□□□□□ -0.45
POLR2J3-213ENST00000508848 UPF3AQ9H1J1 476 aaKnown RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms