RNA–Protein interactions for RNA: ENST00000508736.1

PRPF40B-203, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,861 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-203ENST00000508736 TPM1P09493 284 aa13.01□□□□□ -0.33
PRPF40B-203ENST00000508736 STAT6P42226 847 aa13.01□□□□□ -0.33
PRPF40B-203ENST00000508736 ADCY7P51828 1080 aa13.01□□□□□ -0.33
PRPF40B-203ENST00000508736 CCDC96Q2M329 555 aa13.01□□□□□ -0.33
PRPF40B-203ENST00000508736 RBM26Q5T8P6 1007 aaKnown RBP13.01□□□□□ -0.33
PRPF40B-203ENST00000508736 CIAPIN1Q6FI81 312 aa13.01□□□□□ -0.33
PRPF40B-203ENST00000508736 FAM83AQ86UY5 434 aa13.01□□□□□ -0.33
PRPF40B-203ENST00000508736 TMEM139Q8IV31 216 aa13.01□□□□□ -0.33
PRPF40B-203ENST00000508736 TC2NQ8N9U0 490 aa13.01□□□□□ -0.33
PRPF40B-203ENST00000508736 ZNF397Q8NF99 534 aaPredicted RBP13.01□□□□□ -0.33
PRPF40B-203ENST00000508736 ZBED3Q96IU2 234 aaPredicted RBP13.01□□□□□ -0.33
PRPF40B-203ENST00000508736 PANX2Q96RD6 677 aa13.01□□□□□ -0.33
PRPF40B-203ENST00000508736 NAA15Q9BXJ9 866 aaKnown RBP13.01□□□□□ -0.33
PRPF40B-203ENST00000508736 RIC8AQ9NPQ8 531 aa13.01□□□□□ -0.33
PRPF40B-203ENST00000508736 PPP2R2CQ9Y2T4 447 aa13.01□□□□□ -0.33
PRPF40B-203ENST00000508736 GJA3Q9Y6H8 435 aa13.01□□□□□ -0.33
PRPF40B-203ENST00000508736 FAM196BA6NMK8 535 aa13□□□□□ -0.33
PRPF40B-203ENST00000508736 PPP1R3GB7ZBB8 358 aa13□□□□□ -0.33
PRPF40B-203ENST00000508736 AKR1B15C9JRZ8 316 aaPredicted RBP13□□□□□ -0.33
PRPF40B-203ENST00000508736 TBC1D12O60347 775 aa13□□□□□ -0.33
PRPF40B-203ENST00000508736 MYL1P05976 194 aa13□□□□□ -0.33
PRPF40B-203ENST00000508736 CD44P16070 742 aaKnown RBP13□□□□□ -0.33
PRPF40B-203ENST00000508736 SLC1A4P43007 532 aa13□□□□□ -0.33
PRPF40B-203ENST00000508736 ATP2B2Q01814 1243 aa13□□□□□ -0.33
PRPF40B-203ENST00000508736 SEPT2Q15019 361 aa13□□□□□ -0.33
PRPF40B-203ENST00000508736 SLFN13Q68D06 897 aa13□□□□□ -0.33
PRPF40B-203ENST00000508736 MED15Q96RN5 788 aa13□□□□□ -0.33
PRPF40B-203ENST00000508736 CCSER1Q9C0I3 900 aa13□□□□□ -0.33
PRPF40B-203ENST00000508736 RWDD2AQ9UIY3 292 aa13□□□□□ -0.33
PRPF40B-203ENST00000508736 CTNND2Q9UQB3 1225 aa13□□□□□ -0.33
PRPF40B-203ENST00000508736 ZBTB12Q9Y330 459 aaPredicted RBP13□□□□□ -0.33
PRPF40B-203ENST00000508736 SBF1O95248 1867 aa13□□□□□ -0.33
PRPF40B-203ENST00000508736 SLURP2P0DP57 97 aa12.99□□□□□ -0.33
PRPF40B-203ENST00000508736 CLK2P49760 499 aaKnown RBP12.99□□□□□ -0.33
PRPF40B-203ENST00000508736 MRPL12P52815 198 aaKnown RBP12.99□□□□□ -0.33
PRPF40B-203ENST00000508736 PAK1Q13153 545 aa12.99□□□□□ -0.33
PRPF40B-203ENST00000508736 ZNF658Q5TYW1 1059 aaPredicted RBP12.99□□□□□ -0.33
PRPF40B-203ENST00000508736 RRAGBQ5VZM2 374 aa12.99□□□□□ -0.33
PRPF40B-203ENST00000508736 TTBK2Q6IQ55 1244 aa12.99□□□□□ -0.33
PRPF40B-203ENST00000508736 TEX2Q8IWB9 1127 aa12.99□□□□□ -0.33
PRPF40B-203ENST00000508736 REXO1L1PQ8IX06 675 aa12.99□□□□□ -0.33
PRPF40B-203ENST00000508736 RASSF8Q8NHQ8 419 aa12.99□□□□□ -0.33
PRPF40B-203ENST00000508736 TMEM60Q9H2L4 133 aa12.99□□□□□ -0.33
PRPF40B-203ENST00000508736 MAGEF1Q9HAY2 307 aa12.99□□□□□ -0.33
PRPF40B-203ENST00000508736 DNAI1Q9UI46 699 aa12.99□□□□□ -0.33
PRPF40B-203ENST00000508736 CNTNAP1P78357 1384 aa12.99□□□□□ -0.33
PRPF40B-203ENST00000508736 ITIH6Q6UXX5 1313 aa12.99□□□□□ -0.33
PRPF40B-203ENST00000508736 ZNF541Q9H0D2 1346 aa12.99□□□□□ -0.33
PRPF40B-203ENST00000508736 F5H6K3 240 aa12.99□□□□□ -0.33
PRPF40B-203ENST00000508736 RPN1P04843 607 aaKnown RBP12.99□□□□□ -0.33
PRPF40B-203ENST00000508736 OR52Z1P0C646 297 aa12.99□□□□□ -0.33
PRPF40B-203ENST00000508736 STX17P56962 302 aa12.99□□□□□ -0.33
PRPF40B-203ENST00000508736 KLRC3Q07444 240 aa12.99□□□□□ -0.33
PRPF40B-203ENST00000508736 MCTP2Q6DN12 878 aa12.99□□□□□ -0.33
PRPF40B-203ENST00000508736 KCTD1Q719H9 257 aa12.99□□□□□ -0.33
PRPF40B-203ENST00000508736 IGSF22Q8N9C0 903 aa12.99□□□□□ -0.33
PRPF40B-203ENST00000508736 TBCKQ8TEA7 893 aa12.99□□□□□ -0.33
PRPF40B-203ENST00000508736 CUL5Q93034 780 aa12.99□□□□□ -0.33
PRPF40B-203ENST00000508736 COA7Q96BR5 231 aa12.99□□□□□ -0.33
PRPF40B-203ENST00000508736 CCDC51Q96ER9 411 aa12.99□□□□□ -0.33
PRPF40B-203ENST00000508736 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.99□□□□□ -0.33
PRPF40B-203ENST00000508736 DISC1Q9NRI5 854 aa12.99□□□□□ -0.33
PRPF40B-203ENST00000508736 ADD3Q9UEY8 706 aaKnown RBP12.99□□□□□ -0.33
PRPF40B-203ENST00000508736 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.99□□□□□ -0.33
PRPF40B-203ENST00000508736 USP17L10C9JJH3 530 aa12.98□□□□□ -0.33
PRPF40B-203ENST00000508736 PPP1R11O60927 126 aaPredicted RBP12.98□□□□□ -0.33
PRPF40B-203ENST00000508736 CASP1P29466 404 aa12.98□□□□□ -0.33
PRPF40B-203ENST00000508736 UBA7P41226 1012 aa12.98□□□□□ -0.33
PRPF40B-203ENST00000508736 ADKP55263 362 aaKnown RBP12.98□□□□□ -0.33
PRPF40B-203ENST00000508736 MAP3K10Q02779 954 aa12.98□□□□□ -0.33
PRPF40B-203ENST00000508736 GOLGA8FQ08AF8 430 aa12.98□□□□□ -0.33
PRPF40B-203ENST00000508736 GOLGA8DPQ0D2H9 430 aa12.98□□□□□ -0.33
PRPF40B-203ENST00000508736 STIM1Q13586 685 aa12.98□□□□□ -0.33
PRPF40B-203ENST00000508736 TRIM14Q14142 442 aa12.98□□□□□ -0.33
PRPF40B-203ENST00000508736 BTNL9Q6UXG8 535 aa12.98□□□□□ -0.33
PRPF40B-203ENST00000508736 APTXQ7Z2E3 356 aaKnown RBP12.98□□□□□ -0.33
PRPF40B-203ENST00000508736 CNGA4Q8IV77 575 aa12.98□□□□□ -0.33
PRPF40B-203ENST00000508736 BLZF1Q9H2G9 400 aa12.98□□□□□ -0.33
PRPF40B-203ENST00000508736 CUEDC2Q9H467 287 aa12.98□□□□□ -0.33
PRPF40B-203ENST00000508736 BIN2Q9UBW5 565 aaPredicted RBP12.98□□□□□ -0.33
PRPF40B-203ENST00000508736 TCP10L2B9ZVM9 353 aa12.97□□□□□ -0.33
PRPF40B-203ENST00000508736 CCNT1O60563 726 aaKnown RBP12.97□□□□□ -0.33
PRPF40B-203ENST00000508736 DDNO94850 711 aaPredicted RBP12.97□□□□□ -0.33
PRPF40B-203ENST00000508736 GDF11O95390 407 aa12.97□□□□□ -0.33
PRPF40B-203ENST00000508736 GH2P01242 217 aa12.97□□□□□ -0.33
PRPF40B-203ENST00000508736 CCDC175P0C221 793 aa12.97□□□□□ -0.33
PRPF40B-203ENST00000508736 RPS12P25398 132 aaKnown RBP12.97□□□□□ -0.33
PRPF40B-203ENST00000508736 PTPN21Q16825 1174 aa12.97□□□□□ -0.33
PRPF40B-203ENST00000508736 LETM2Q2VYF4 491 aa12.97□□□□□ -0.33
PRPF40B-203ENST00000508736 PPP4R3AQ6IN85 833 aa12.97□□□□□ -0.33
PRPF40B-203ENST00000508736 TRIM65Q6PJ69 517 aa12.97□□□□□ -0.33
PRPF40B-203ENST00000508736 SMAP1Q8IYB5 467 aaPredicted RBP12.97□□□□□ -0.33
PRPF40B-203ENST00000508736 SMYD4Q8IYR2 804 aaPredicted RBP12.97□□□□□ -0.33
PRPF40B-203ENST00000508736 CCDC47Q96A33 483 aaKnown RBP12.97□□□□□ -0.33
PRPF40B-203ENST00000508736 NAP1L4Q99733 375 aaKnown RBP12.97□□□□□ -0.33
PRPF40B-203ENST00000508736 GTPBP4Q9BZE4 634 aaKnown RBP12.97□□□□□ -0.33
PRPF40B-203ENST00000508736 LIMA1Q9UHB6 759 aaKnown RBP12.97□□□□□ -0.33
PRPF40B-203ENST00000508736 SLC16A2P36021 539 aa12.97□□□□□ -0.33
PRPF40B-203ENST00000508736 PBX1P40424 430 aa12.97□□□□□ -0.33
PRPF40B-203ENST00000508736 KCNB1Q14721 858 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms