RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 DPYSL4O14531 572 aa11.88□□□□□ -0.51
PDLIM5-210ENST00000508216 OPLAHO14841 1288 aa11.88□□□□□ -0.51
PDLIM5-210ENST00000508216 MTA2O94776 668 aa11.88□□□□□ -0.51
PDLIM5-210ENST00000508216 SSBP05455 408 aaKnown RBP eCLIP11.88□□□□□ -0.51
PDLIM5-210ENST00000508216 HSPA1AP0DMV8 641 aaKnown RBP11.88□□□□□ -0.51
PDLIM5-210ENST00000508216 HSPA1BP0DMV9 641 aaKnown RBP11.88□□□□□ -0.51
PDLIM5-210ENST00000508216 ATP2A2P16615 1042 aaKnown RBP11.88□□□□□ -0.51
PDLIM5-210ENST00000508216 PTPN2P17706 415 aa11.88□□□□□ -0.51
PDLIM5-210ENST00000508216 FUT4P22083 530 aa11.88□□□□□ -0.51
PDLIM5-210ENST00000508216 GSTT1P30711 240 aa11.88□□□□□ -0.51
PDLIM5-210ENST00000508216 PEX5P50542 639 aa11.88□□□□□ -0.51
PDLIM5-210ENST00000508216 CYP4A11Q02928 519 aa11.88□□□□□ -0.51
PDLIM5-210ENST00000508216 SEPT6Q14141 434 aa11.88□□□□□ -0.51
PDLIM5-210ENST00000508216 RASA2Q15283 850 aa11.88□□□□□ -0.51
PDLIM5-210ENST00000508216 ZNF362Q5T0B9 420 aaPredicted RBP11.88□□□□□ -0.51
PDLIM5-210ENST00000508216 KAZNQ674X7 775 aa11.88□□□□□ -0.51
PDLIM5-210ENST00000508216 TMC4Q7Z404 712 aa11.88□□□□□ -0.51
PDLIM5-210ENST00000508216 TMEM139Q8IV31 216 aa11.88□□□□□ -0.51
PDLIM5-210ENST00000508216 SH3TC2Q8TF17 1288 aa11.88□□□□□ -0.51
PDLIM5-210ENST00000508216 ATP8B4Q8TF62 1192 aa11.88□□□□□ -0.51
PDLIM5-210ENST00000508216 SKA1Q96BD8 255 aa11.88□□□□□ -0.51
PDLIM5-210ENST00000508216 CYFIP2Q96F07 1278 aa11.88□□□□□ -0.51
PDLIM5-210ENST00000508216 WDR7Q9Y4E6 1490 aa11.88□□□□□ -0.51
PDLIM5-210ENST00000508216 MYOM1P52179 1685 aa11.88□□□□□ -0.51
PDLIM5-210ENST00000508216 ADGRB2O60241 1585 aa11.87□□□□□ -0.51
PDLIM5-210ENST00000508216 SGTAO43765 313 aa11.87□□□□□ -0.51
PDLIM5-210ENST00000508216 SUPT3HO75486 399 aa11.87□□□□□ -0.51
PDLIM5-210ENST00000508216 TRIM27P14373 513 aa11.87□□□□□ -0.51
PDLIM5-210ENST00000508216 CLK1P49759 484 aaKnown RBP11.87□□□□□ -0.51
PDLIM5-210ENST00000508216 DEPDC1Q5TB30 811 aa11.87□□□□□ -0.51
PDLIM5-210ENST00000508216 HIBCHQ6NVY1 386 aaPredicted RBP11.87□□□□□ -0.51
PDLIM5-210ENST00000508216 CACNA2D4Q7Z3S7 1137 aa11.87□□□□□ -0.51
PDLIM5-210ENST00000508216 TTC6Q86TZ1 520 aa11.87□□□□□ -0.51
PDLIM5-210ENST00000508216 PLEKHM2Q8IWE5 1019 aa11.87□□□□□ -0.51
PDLIM5-210ENST00000508216 FAM186BQ8IYM0 893 aa11.87□□□□□ -0.51
PDLIM5-210ENST00000508216 ALDH16A1Q8IZ83 802 aa11.87□□□□□ -0.51
PDLIM5-210ENST00000508216 CRACR2BQ8N4Y2 399 aaPredicted RBP11.87□□□□□ -0.51
PDLIM5-210ENST00000508216 SPERTQ8NA61 448 aa11.87□□□□□ -0.51
PDLIM5-210ENST00000508216 SUN5Q8TC36 379 aa11.87□□□□□ -0.51
PDLIM5-210ENST00000508216 HPS3Q969F9 1004 aa11.87□□□□□ -0.51
PDLIM5-210ENST00000508216 LENG1Q96BZ8 264 aaPredicted RBP11.87□□□□□ -0.51
PDLIM5-210ENST00000508216 SNF8Q96H20 258 aa11.87□□□□□ -0.51
PDLIM5-210ENST00000508216 HIC2Q96JB3 615 aa11.87□□□□□ -0.51
PDLIM5-210ENST00000508216 ATAD3AQ9NVI7 634 aa11.87□□□□□ -0.51
PDLIM5-210ENST00000508216 RHBDL2Q9NX52 303 aa11.87□□□□□ -0.51
PDLIM5-210ENST00000508216 CFAP45Q9UL16 551 aa11.87□□□□□ -0.51
PDLIM5-210ENST00000508216 MAFFQ9ULX9 164 aa11.87□□□□□ -0.51
PDLIM5-210ENST00000508216 CEMIPQ8WUJ3 1361 aa11.87□□□□□ -0.51
PDLIM5-210ENST00000508216 KIAA0232Q92628 1395 aa11.87□□□□□ -0.51
PDLIM5-210ENST00000508216 A0A0J9YVX5 310 aa11.87□□□□□ -0.51
PDLIM5-210ENST00000508216 ANKRD62A6NC57 917 aa11.87□□□□□ -0.51
PDLIM5-210ENST00000508216 TUBA3CQ13748 450 aa11.87□□□□□ -0.51
PDLIM5-210ENST00000508216 NDUFA5Q16718 116 aa11.87□□□□□ -0.51
PDLIM5-210ENST00000508216 TMEM259Q4ZIN3 620 aa11.87□□□□□ -0.51
PDLIM5-210ENST00000508216 CABP7Q86V35 215 aa11.87□□□□□ -0.51
PDLIM5-210ENST00000508216 GRAMD2AQ8IUY3 354 aa11.87□□□□□ -0.51
PDLIM5-210ENST00000508216 CD302Q8IX05 232 aa11.87□□□□□ -0.51
PDLIM5-210ENST00000508216 SAMD14Q8IZD0 417 aaPredicted RBP11.87□□□□□ -0.51
PDLIM5-210ENST00000508216 CCDC63Q8NA47 563 aa11.87□□□□□ -0.51
PDLIM5-210ENST00000508216 DPF3Q92784 378 aa11.87□□□□□ -0.51
PDLIM5-210ENST00000508216 STIM2Q9P246 746 aa11.87□□□□□ -0.51
PDLIM5-210ENST00000508216 HERC5Q9UII4 1024 aaKnown RBP11.87□□□□□ -0.51
PDLIM5-210ENST00000508216 FAM184BQ9ULE4 1060 aa11.87□□□□□ -0.51
PDLIM5-210ENST00000508216 CCPG1Q9ULG6 757 aa11.87□□□□□ -0.51
PDLIM5-210ENST00000508216 MTMR6Q9Y217 621 aa11.87□□□□□ -0.51
PDLIM5-210ENST00000508216 AKAP12Q02952 1782 aa11.86□□□□□ -0.51
PDLIM5-210ENST00000508216 PBRM1Q86U86 1689 aa11.86□□□□□ -0.51
PDLIM5-210ENST00000508216 SLC26A4O43511 780 aa11.86□□□□□ -0.51
PDLIM5-210ENST00000508216 ASLP04424 464 aa11.86□□□□□ -0.51
PDLIM5-210ENST00000508216 PAEPP09466 180 aa11.86□□□□□ -0.51
PDLIM5-210ENST00000508216 HALP42357 657 aa11.86□□□□□ -0.51
PDLIM5-210ENST00000508216 LIFRP42702 1097 aa11.86□□□□□ -0.51
PDLIM5-210ENST00000508216 ACADSBP45954 432 aa11.86□□□□□ -0.51
PDLIM5-210ENST00000508216 HDGFP51858 240 aaKnown RBP11.86□□□□□ -0.51
PDLIM5-210ENST00000508216 HPCAP84074 193 aa11.86□□□□□ -0.51
PDLIM5-210ENST00000508216 COX10Q12887 443 aa11.86□□□□□ -0.51
PDLIM5-210ENST00000508216 SKIDA1Q1XH10 827 aa11.86□□□□□ -0.51
PDLIM5-210ENST00000508216 MUM1Q2TAK8 710 aa11.86□□□□□ -0.51
PDLIM5-210ENST00000508216 CCBE1Q6UXH8 406 aaPredicted RBP11.86□□□□□ -0.51
PDLIM5-210ENST00000508216 CCDC146Q8IYE0 955 aa11.86□□□□□ -0.51
PDLIM5-210ENST00000508216 ARFGAP2Q8N6H7 521 aa11.86□□□□□ -0.51
PDLIM5-210ENST00000508216 ENOX1Q8TC92 643 aaKnown RBP11.86□□□□□ -0.51
PDLIM5-210ENST00000508216 CCDC12Q8WUD4 166 aaPredicted RBP11.86□□□□□ -0.51
PDLIM5-210ENST00000508216 CENPTQ96BT3 561 aa11.86□□□□□ -0.51
PDLIM5-210ENST00000508216 VMP1Q96GC9 406 aa11.86□□□□□ -0.51
PDLIM5-210ENST00000508216 HAUS7Q99871 368 aa11.86□□□□□ -0.51
PDLIM5-210ENST00000508216 HGH1Q9BTY7 390 aa11.86□□□□□ -0.51
PDLIM5-210ENST00000508216 GPBP1L1Q9HC44 474 aaPredicted RBP11.86□□□□□ -0.51
PDLIM5-210ENST00000508216 SAMSN1Q9NSI8 373 aaKnown RBP11.86□□□□□ -0.51
PDLIM5-210ENST00000508216 SCOCQ9UIL1 159 aa11.86□□□□□ -0.51
PDLIM5-210ENST00000508216 EIF2AK4Q9P2K8 1649 aaKnown RBP11.86□□□□□ -0.51
PDLIM5-210ENST00000508216 PLEKHG1Q9ULL1 1385 aa11.86□□□□□ -0.51
PDLIM5-210ENST00000508216 SYNJ2O15056 1496 aa11.85□□□□□ -0.51
PDLIM5-210ENST00000508216 DYTNA2CJ06 578 aa11.85□□□□□ -0.51
PDLIM5-210ENST00000508216 SPDYE16A6NNV3 312 aaPredicted RBP11.85□□□□□ -0.51
PDLIM5-210ENST00000508216 ITGA2BP08514 1039 aa11.85□□□□□ -0.51
PDLIM5-210ENST00000508216 UBL4AP11441 157 aa11.85□□□□□ -0.51
PDLIM5-210ENST00000508216 MDH1P40925 334 aaKnown RBP11.85□□□□□ -0.51
PDLIM5-210ENST00000508216 DNM1Q05193 864 aaKnown RBP11.85□□□□□ -0.51
PDLIM5-210ENST00000508216 PDCLQ13371 301 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms