RNA–Protein interactions for RNA: ENST00000508197.1

CAST-221, Transcript of calpastatin, humanhuman

TSL 3

Gene CAST, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-221ENST00000508197 MYOGP15173 224 aa13.46□□□□□ -0.25
CAST-221ENST00000508197 CDK8P49336 464 aa13.46□□□□□ -0.25
CAST-221ENST00000508197 KCNQ1P51787 676 aa13.46□□□□□ -0.25
CAST-221ENST00000508197 RABGGTBP53611 331 aa13.46□□□□□ -0.25
CAST-221ENST00000508197 PLA2G2CQ5R387 149 aa13.46□□□□□ -0.25
CAST-221ENST00000508197 FAM83BQ5T0W9 1011 aa13.46□□□□□ -0.25
CAST-221ENST00000508197 LIAT1Q6ZQX7 453 aa13.46□□□□□ -0.25
CAST-221ENST00000508197 TMEM199Q8N511 208 aa13.46□□□□□ -0.25
CAST-221ENST00000508197 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.46□□□□□ -0.25
CAST-221ENST00000508197 EPHX3Q9H6B9 360 aa13.46□□□□□ -0.25
CAST-221ENST00000508197 ARMT1Q9H993 441 aa13.46□□□□□ -0.25
CAST-221ENST00000508197 IL23AQ9NPF7 189 aa13.46□□□□□ -0.25
CAST-221ENST00000508197 ZHX1Q9UKY1 873 aaPredicted RBP13.46□□□□□ -0.25
CAST-221ENST00000508197 CHD9Q3L8U1 2897 aa13.46□□□□□ -0.25
CAST-221ENST00000508197 CHGBP05060 677 aa13.45□□□□□ -0.26
CAST-221ENST00000508197 C6orf222P0C671 652 aaPredicted RBP13.45□□□□□ -0.26
CAST-221ENST00000508197 GJA9P57773 515 aa13.45□□□□□ -0.26
CAST-221ENST00000508197 ACVR2BQ13705 512 aa13.45□□□□□ -0.26
CAST-221ENST00000508197 RAB30Q15771 203 aa13.45□□□□□ -0.26
CAST-221ENST00000508197 C12orf60Q5U649 245 aa13.45□□□□□ -0.26
CAST-221ENST00000508197 PSRC1Q6PGN9 363 aaPredicted RBP13.45□□□□□ -0.26
CAST-221ENST00000508197 OTOP2Q7RTS6 562 aa13.45□□□□□ -0.26
CAST-221ENST00000508197 AACSQ86V21 672 aa13.45□□□□□ -0.26
CAST-221ENST00000508197 MSL3Q8N5Y2 521 aaKnown RBP13.45□□□□□ -0.26
CAST-221ENST00000508197 VTI1AQ96AJ9 217 aa13.45□□□□□ -0.26
CAST-221ENST00000508197 NUP88Q99567 741 aaPredicted RBP13.45□□□□□ -0.26
CAST-221ENST00000508197 KATNBL1Q9H079 304 aa13.45□□□□□ -0.26
CAST-221ENST00000508197 UPF3AQ9H1J1 476 aaKnown RBP13.45□□□□□ -0.26
CAST-221ENST00000508197 SLC28A3Q9HAS3 691 aa13.45□□□□□ -0.26
CAST-221ENST00000508197 MSRAQ9UJ68 235 aa13.45□□□□□ -0.26
CAST-221ENST00000508197 TCF20Q9UGU0 1960 aaKnown RBP13.45□□□□□ -0.26
CAST-221ENST00000508197 GRIN2DO15399 1336 aa13.44□□□□□ -0.26
CAST-221ENST00000508197 MROH7Q68CQ1 1323 aa13.44□□□□□ -0.26
CAST-221ENST00000508197 SYNGAP1Q96PV0 1343 aa13.44□□□□□ -0.26
CAST-221ENST00000508197 USP17L12C9JPN9 530 aa13.44□□□□□ -0.26
CAST-221ENST00000508197 USP17L21D6R901 530 aa13.44□□□□□ -0.26
CAST-221ENST00000508197 RFXAPO00287 272 aa13.44□□□□□ -0.26
CAST-221ENST00000508197 FGBP02675 491 aa13.44□□□□□ -0.26
CAST-221ENST00000508197 NDUFV2P19404 249 aa13.44□□□□□ -0.26
CAST-221ENST00000508197 PTGS1P23219 599 aa13.44□□□□□ -0.26
CAST-221ENST00000508197 NKX3-2P78367 333 aa13.44□□□□□ -0.26
CAST-221ENST00000508197 LAPTM4AQ15012 233 aa13.44□□□□□ -0.26
CAST-221ENST00000508197 CCDC144BQ3MJ40 725 aa13.44□□□□□ -0.26
CAST-221ENST00000508197 GNASQ5JWF2 1037 aa13.44□□□□□ -0.26
CAST-221ENST00000508197 CCDC174Q6PII3 467 aa13.44□□□□□ -0.26
CAST-221ENST00000508197 SLC43A3Q8NBI5 491 aa13.44□□□□□ -0.26
CAST-221ENST00000508197 PCSK9Q8NBP7 692 aaKnown RBP13.44□□□□□ -0.26
CAST-221ENST00000508197 CCDC17Q96LX7 622 aa13.44□□□□□ -0.26
CAST-221ENST00000508197 LRFN3Q9BTN0 628 aa13.44□□□□□ -0.26
CAST-221ENST00000508197 BDP1A6H8Y1 2624 aa13.43□□□□□ -0.26
CAST-221ENST00000508197 ASTN1O14525 1302 aa13.43□□□□□ -0.26
CAST-221ENST00000508197 A0A0U1RQG5 324 aaPredicted RBP13.43□□□□□ -0.26
CAST-221ENST00000508197 GFRA3O60609 400 aa13.43□□□□□ -0.26
CAST-221ENST00000508197 MMP16P51512 607 aa13.43□□□□□ -0.26
CAST-221ENST00000508197 BEX3Q00994 111 aa13.43□□□□□ -0.26
CAST-221ENST00000508197 DDX11Q96FC9 970 aa13.43□□□□□ -0.26
CAST-221ENST00000508197 C1QTNF1Q9BXJ1 281 aa13.43□□□□□ -0.26
CAST-221ENST00000508197 SH2D4AQ9H788 454 aa13.43□□□□□ -0.26
CAST-221ENST00000508197 KANSL2Q9H9L4 492 aa13.43□□□□□ -0.26
CAST-221ENST00000508197 IL1RAPL2Q9NP60 686 aa13.43□□□□□ -0.26
CAST-221ENST00000508197 PCDHGC3Q9UN70 934 aa13.43□□□□□ -0.26
CAST-221ENST00000508197 EXOC6BQ9Y2D4 811 aa13.43□□□□□ -0.26
CAST-221ENST00000508197 PARP14Q460N5 1801 aa13.43□□□□□ -0.26
CAST-221ENST00000508197 COL11A1P12107 1806 aaPredicted RBP13.42□□□□□ -0.26
CAST-221ENST00000508197 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.42□□□□□ -0.26
CAST-221ENST00000508197 GOLIM4O00461 696 aa13.42□□□□□ -0.26
CAST-221ENST00000508197 RLBP1P12271 317 aa13.42□□□□□ -0.26
CAST-221ENST00000508197 CCL23P55773 120 aa13.42□□□□□ -0.26
CAST-221ENST00000508197 SNRNP48Q6IEG0 339 aaKnown RBP13.42□□□□□ -0.26
CAST-221ENST00000508197 CXCL17Q6UXB2 119 aa13.42□□□□□ -0.26
CAST-221ENST00000508197 C16orf86Q6ZW13 317 aa13.42□□□□□ -0.26
CAST-221ENST00000508197 ZNF598Q86UK7 904 aaKnown RBP13.42□□□□□ -0.26
CAST-221ENST00000508197 RETREG3Q86VR2 466 aa13.42□□□□□ -0.26
CAST-221ENST00000508197 TEX13BQ9BXU2 312 aa13.42□□□□□ -0.26
CAST-221ENST00000508197 WNT8AQ9H1J5 351 aa13.42□□□□□ -0.26
CAST-221ENST00000508197 ABHD16BQ9H3Z7 469 aa13.42□□□□□ -0.26
CAST-221ENST00000508197 CHD7Q9P2D1 2997 aa13.42□□□□□ -0.26
CAST-221ENST00000508197 APBB1O00213 710 aa13.41□□□□□ -0.26
CAST-221ENST00000508197 ATP2A1O14983 1001 aa13.41□□□□□ -0.26
CAST-221ENST00000508197 RAD21O60216 631 aa13.41□□□□□ -0.26
CAST-221ENST00000508197 COPB2P35606 906 aa13.41□□□□□ -0.26
CAST-221ENST00000508197 TTF1Q15361 905 aaPredicted RBP13.41□□□□□ -0.26
CAST-221ENST00000508197 TMEM63BQ5T3F8 832 aa13.41□□□□□ -0.26
CAST-221ENST00000508197 ZKSCAN2Q63HK3 967 aa13.41□□□□□ -0.26
CAST-221ENST00000508197 KRT40Q6A162 431 aa13.41□□□□□ -0.26
CAST-221ENST00000508197 CEP85Q6P2H3 762 aa13.41□□□□□ -0.26
CAST-221ENST00000508197 CPXCR1Q8N123 301 aa13.41□□□□□ -0.26
CAST-221ENST00000508197 MICALL1Q8N3F8 863 aa13.41□□□□□ -0.26
CAST-221ENST00000508197 IL27Q8NEV9 243 aa13.41□□□□□ -0.26
CAST-221ENST00000508197 SLF1Q9BQI6 1058 aa13.41□□□□□ -0.26
CAST-221ENST00000508197 TRPV6Q9H1D0 765 aa13.41□□□□□ -0.26
CAST-221ENST00000508197 HIPK3Q9H422 1215 aa13.41□□□□□ -0.26
CAST-221ENST00000508197 RAVER2Q9HCJ3 691 aaKnown RBP13.41□□□□□ -0.26
CAST-221ENST00000508197 C11orf16Q9NQ32 467 aa13.41□□□□□ -0.26
CAST-221ENST00000508197 ATP8A2Q9NTI2 1148 aa13.41□□□□□ -0.26
CAST-221ENST00000508197 XIRP2A4UGR9 3374 aa13.41□□□□□ -0.26
CAST-221ENST00000508197 PRRC2BQ5JSZ5 2229 aaKnown RBP13.4□□□□□ -0.26
CAST-221ENST00000508197 EPOPA6NHQ4 379 aa13.4□□□□□ -0.26
CAST-221ENST00000508197 F5H6K3 240 aa13.4□□□□□ -0.26
CAST-221ENST00000508197 ERC2O15083 957 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms