RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 DIS3Q9Y2L1 958 aaKnown RBP23.07■■□□□ 1.28
USP53-203ENST00000507597 LOC102724159A0A0B4J2E5 919 aa23.06■■□□□ 1.28
USP53-203ENST00000507597 PDCP20941 246 aa23.06■■□□□ 1.28
USP53-203ENST00000507597 ADORA2AP29274 412 aa23.06■■□□□ 1.28
USP53-203ENST00000507597 PWP2Q15269 919 aaKnown RBP23.06■■□□□ 1.28
USP53-203ENST00000507597 SAFBQ15424 915 aaKnown RBP eCLIP23.06■■□□□ 1.28
USP53-203ENST00000507597 PKN2Q16513 984 aaKnown RBP23.06■■□□□ 1.28
USP53-203ENST00000507597 ZMYND12Q9H0C1 365 aa23.06■■□□□ 1.28
USP53-203ENST00000507597 A1CFQ9NQ94 594 aaKnown RBP23.06■■□□□ 1.28
USP53-203ENST00000507597 CYP39A1Q9NYL5 469 aa23.06■■□□□ 1.28
USP53-203ENST00000507597 SRRDQ9UH36 339 aa23.06■■□□□ 1.28
USP53-203ENST00000507597 TRIM17Q9Y577 477 aa23.06■■□□□ 1.28
USP53-203ENST00000507597 NFIBO00712 420 aa23.05■■□□□ 1.28
USP53-203ENST00000507597 JAK2O60674 1132 aa23.05■■□□□ 1.28
USP53-203ENST00000507597 PPFIA3O75145 1194 aa23.05■■□□□ 1.28
USP53-203ENST00000507597 ECM2O94769 699 aaPredicted RBP23.05■■□□□ 1.28
USP53-203ENST00000507597 FOSP01100 380 aaPredicted RBP23.05■■□□□ 1.28
USP53-203ENST00000507597 RPS6P62753 249 aaKnown RBP23.05■■□□□ 1.28
USP53-203ENST00000507597 ST3GAL1Q11201 340 aa23.05■■□□□ 1.28
USP53-203ENST00000507597 BAATQ14032 418 aaPredicted RBP23.05■■□□□ 1.28
USP53-203ENST00000507597 MORN1Q5T089 497 aa23.05■■□□□ 1.28
USP53-203ENST00000507597 C8orf76Q96K31 380 aa23.05■■□□□ 1.28
USP53-203ENST00000507597 RIC8AQ9NPQ8 531 aa23.05■■□□□ 1.28
USP53-203ENST00000507597 BAZ2BQ9UIF8 2168 aaKnown RBP23.05■■□□□ 1.28
USP53-203ENST00000507597 MYH6P13533 1939 aa23.04■■□□□ 1.28
USP53-203ENST00000507597 PIK3CDO00329 1044 aa23.04■■□□□ 1.28
USP53-203ENST00000507597 XRCC5P13010 732 aaKnown RBP23.04■■□□□ 1.28
USP53-203ENST00000507597 GJB2P29033 226 aa23.04■■□□□ 1.28
USP53-203ENST00000507597 GHRHRQ02643 423 aa23.04■■□□□ 1.28
USP53-203ENST00000507597 IRF5Q13568 498 aa23.04■■□□□ 1.28
USP53-203ENST00000507597 CTU1Q7Z7A3 348 aaKnown RBP23.04■■□□□ 1.28
USP53-203ENST00000507597 DNERQ8NFT8 737 aa23.04■■□□□ 1.28
USP53-203ENST00000507597 RAET1EQ8TD07 263 aa23.04■■□□□ 1.28
USP53-203ENST00000507597 ARHGAP39Q9C0H5 1083 aa23.04■■□□□ 1.28
USP53-203ENST00000507597 VPS54Q9P1Q0 977 aa23.04■■□□□ 1.28
USP53-203ENST00000507597 SPDYE3A6NKU9 549 aa23.03■■□□□ 1.28
USP53-203ENST00000507597 HOXC6P09630 235 aa23.03■■□□□ 1.28
USP53-203ENST00000507597 FDPSP14324 419 aaKnown RBP23.03■■□□□ 1.28
USP53-203ENST00000507597 HSD17B4P51659 736 aa23.03■■□□□ 1.28
USP53-203ENST00000507597 MSL3Q8N5Y2 521 aaKnown RBP23.03■■□□□ 1.28
USP53-203ENST00000507597 APBA2Q99767 749 aa23.03■■□□□ 1.28
USP53-203ENST00000507597 GJD2Q9UKL4 321 aa23.03■■□□□ 1.28
USP53-203ENST00000507597 ASB14A6NK59 587 aa23.02■■□□□ 1.28
USP53-203ENST00000507597 FLT3LGP49771 235 aa23.02■■□□□ 1.28
USP53-203ENST00000507597 AP3B2Q13367 1082 aa23.02■■□□□ 1.28
USP53-203ENST00000507597 OTOP1Q7RTM1 612 aa23.02■■□□□ 1.28
USP53-203ENST00000507597 ZNF467Q7Z7K2 595 aaPredicted RBP23.02■■□□□ 1.28
USP53-203ENST00000507597 DNAJC25-GNG10A0A024R161 153 aa23.01■■□□□ 1.27
USP53-203ENST00000507597 H3BQV1 296 aa23.01■■□□□ 1.27
USP53-203ENST00000507597 CYP2B6P20813 491 aa23.01■■□□□ 1.27
USP53-203ENST00000507597 PRKCZQ05513 592 aa23.01■■□□□ 1.27
USP53-203ENST00000507597 NSUN6Q8TEA1 469 aaKnown RBP23.01■■□□□ 1.27
USP53-203ENST00000507597 USP6NLQ92738 828 aa23.01■■□□□ 1.27
USP53-203ENST00000507597 PCDHA4Q9UN74 947 aa23.01■■□□□ 1.27
USP53-203ENST00000507597 CTGFP29279 349 aa23■■□□□ 1.27
USP53-203ENST00000507597 ZNF792Q3KQV3 632 aa23■■□□□ 1.27
USP53-203ENST00000507597 ARHGEF16Q5VV41 709 aa23■■□□□ 1.27
USP53-203ENST00000507597 LARP1BQ659C4 914 aaKnown RBP23■■□□□ 1.27
USP53-203ENST00000507597 BLIDQ8IZY5 108 aa23■■□□□ 1.27
USP53-203ENST00000507597 REXO1Q8N1G1 1221 aaKnown RBP23■■□□□ 1.27
USP53-203ENST00000507597 FAM133AQ8N9E0 248 aa23■■□□□ 1.27
USP53-203ENST00000507597 DAGLBQ8NCG7 672 aa23■■□□□ 1.27
USP53-203ENST00000507597 SYTL5Q8TDW5 730 aaPredicted RBP23■■□□□ 1.27
USP53-203ENST00000507597 PXYLP1Q8TE99 480 aa23■■□□□ 1.27
USP53-203ENST00000507597 IWS1Q96ST2 819 aa23■■□□□ 1.27
USP53-203ENST00000507597 PHF20Q9BVI0 1012 aa23■■□□□ 1.27
USP53-203ENST00000507597 MEIS2O14770 477 aa22.99■■□□□ 1.27
USP53-203ENST00000507597 PGK2P07205 417 aa22.99■■□□□ 1.27
USP53-203ENST00000507597 TAL1P17542 331 aaPredicted RBP22.99■■□□□ 1.27
USP53-203ENST00000507597 KRT2P35908 639 aa22.99■■□□□ 1.27
USP53-203ENST00000507597 GNL2Q13823 731 aaKnown RBP22.99■■□□□ 1.27
USP53-203ENST00000507597 OLFML2BQ68BL8 750 aa22.99■■□□□ 1.27
USP53-203ENST00000507597 FCHSD1Q86WN1 690 aa22.99■■□□□ 1.27
USP53-203ENST00000507597 SLAIN1Q8ND83 568 aa22.99■■□□□ 1.27
USP53-203ENST00000507597 RMDN3Q96TC7 470 aa22.99■■□□□ 1.27
USP53-203ENST00000507597 OPLAHO14841 1288 aa22.98■■□□□ 1.27
USP53-203ENST00000507597 COBLO75128 1261 aa22.98■■□□□ 1.27
USP53-203ENST00000507597 MFSD14CQ5VZR4 134 aa22.98■■□□□ 1.27
USP53-203ENST00000507597 TYW1BQ6NUM6 668 aa22.98■■□□□ 1.27
USP53-203ENST00000507597 USP17L6PQ6QN14 398 aa22.98■■□□□ 1.27
USP53-203ENST00000507597 SLC30A10Q6XR72 485 aa22.98■■□□□ 1.27
USP53-203ENST00000507597 FBXO18Q8NFZ0 1043 aa22.98■■□□□ 1.27
USP53-203ENST00000507597 TBC1D5Q92609 795 aa22.98■■□□□ 1.27
USP53-203ENST00000507597 GABRQQ9UN88 632 aa22.98■■□□□ 1.27
USP53-203ENST00000507597 PTPN22Q9Y2R2 807 aa22.98■■□□□ 1.27
USP53-203ENST00000507597 MGAMO43451 1857 aa22.97■■□□□ 1.27
USP53-203ENST00000507597 MMP1P03956 469 aa22.97■■□□□ 1.27
USP53-203ENST00000507597 HOXA13P31271 388 aaPredicted RBP22.97■■□□□ 1.27
USP53-203ENST00000507597 KRT40Q6A162 431 aa22.97■■□□□ 1.27
USP53-203ENST00000507597 XRRA1Q6P2D8 792 aa22.97■■□□□ 1.27
USP53-203ENST00000507597 MAML3Q96JK9 1138 aa22.97■■□□□ 1.27
USP53-203ENST00000507597 AIFM3Q96NN9 605 aa22.97■■□□□ 1.27
USP53-203ENST00000507597 ZNF236Q9UL36 1845 aa22.96■■□□□ 1.27
USP53-203ENST00000507597 ADCY3O60266 1144 aa22.96■■□□□ 1.27
USP53-203ENST00000507597 ALDH5A1P51649 535 aaPredicted RBP22.96■■□□□ 1.27
USP53-203ENST00000507597 CNTN2Q02246 1040 aa22.96■■□□□ 1.27
USP53-203ENST00000507597 FBXO46Q6PJ61 603 aaPredicted RBP22.96■■□□□ 1.27
USP53-203ENST00000507597 KRT25Q7Z3Z0 450 aa22.96■■□□□ 1.27
USP53-203ENST00000507597 TAAR1Q96RJ0 339 aa22.96■■□□□ 1.27
USP53-203ENST00000507597 BIN2Q9UBW5 565 aaPredicted RBP22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms