RNA–Protein interactions for RNA: ENST00000507485.1

RPS3A-206, Transcript of ribosomal protein S3A, humanhuman

TSL 1 (best)

Gene RPS3A, Length 1,526 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3A-206ENST00000507485 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.74□□□□□ -0.69
RPS3A-206ENST00000507485 IFNL3Q8IZI9 196 aa10.74□□□□□ -0.69
RPS3A-206ENST00000507485 PRPF38AQ8NAV1 312 aaKnown RBP10.74□□□□□ -0.69
RPS3A-206ENST00000507485 MYLIPQ8WY64 445 aa10.74□□□□□ -0.69
RPS3A-206ENST00000507485 KIFC2Q96AC6 838 aa10.74□□□□□ -0.69
RPS3A-206ENST00000507485 ZHX1Q9UKY1 873 aaPredicted RBP10.74□□□□□ -0.69
RPS3A-206ENST00000507485 LCTP09848 1927 aa10.74□□□□□ -0.69
RPS3A-206ENST00000507485 ASTN1O14525 1302 aa10.74□□□□□ -0.69
RPS3A-206ENST00000507485 ZNF536O15090 1300 aa10.74□□□□□ -0.69
RPS3A-206ENST00000507485 SYNGAP1Q96PV0 1343 aa10.74□□□□□ -0.69
RPS3A-206ENST00000507485 PLIN4Q96Q06 1357 aa10.74□□□□□ -0.69
RPS3A-206ENST00000507485 TDO2P48775 406 aa10.74□□□□□ -0.69
RPS3A-206ENST00000507485 TREML4Q6UXN2 200 aa10.74□□□□□ -0.69
RPS3A-206ENST00000507485 C16orf59Q7L2K0 433 aa10.74□□□□□ -0.69
RPS3A-206ENST00000507485 ANKRD33Q7Z3H0 272 aa10.74□□□□□ -0.69
RPS3A-206ENST00000507485 DDX11Q96FC9 970 aa10.74□□□□□ -0.69
RPS3A-206ENST00000507485 TMEM134Q9H6X4 195 aa10.74□□□□□ -0.69
RPS3A-206ENST00000507485 CNPY2Q9Y2B0 182 aa10.74□□□□□ -0.69
RPS3A-206ENST00000507485 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.73□□□□□ -0.69
RPS3A-206ENST00000507485 PATL2C9JE40 543 aaKnown RBP10.73□□□□□ -0.69
RPS3A-206ENST00000507485 NR1I2O75469 434 aa10.73□□□□□ -0.69
RPS3A-206ENST00000507485 COPB2P35606 906 aa10.73□□□□□ -0.69
RPS3A-206ENST00000507485 SNAP25P60880 206 aa10.73□□□□□ -0.69
RPS3A-206ENST00000507485 SMAD3P84022 425 aaKnown RBP10.73□□□□□ -0.69
RPS3A-206ENST00000507485 ACVR2BQ13705 512 aa10.73□□□□□ -0.69
RPS3A-206ENST00000507485 ZMYM1Q5SVZ6 1142 aa10.73□□□□□ -0.69
RPS3A-206ENST00000507485 TMEM63BQ5T3F8 832 aa10.73□□□□□ -0.69
RPS3A-206ENST00000507485 CCDC129Q6ZRS4 1044 aa10.73□□□□□ -0.69
RPS3A-206ENST00000507485 ARMCX2Q7L311 632 aa10.73□□□□□ -0.69
RPS3A-206ENST00000507485 GMCL1P1Q8NEA9 526 aa10.73□□□□□ -0.69
RPS3A-206ENST00000507485 NEDD1Q8NHV4 660 aa10.73□□□□□ -0.69
RPS3A-206ENST00000507485 AGBL1Q96MI9 1066 aa10.73□□□□□ -0.69
RPS3A-206ENST00000507485 TSEN34Q9BSV6 310 aaKnown RBP10.73□□□□□ -0.69
RPS3A-206ENST00000507485 UPF3AQ9H1J1 476 aaKnown RBP10.73□□□□□ -0.69
RPS3A-206ENST00000507485 CHMP4BQ9H444 224 aaKnown RBP10.73□□□□□ -0.69
RPS3A-206ENST00000507485 HOMER2Q9NSB8 354 aa10.73□□□□□ -0.69
RPS3A-206ENST00000507485 TBX21Q9UL17 535 aa10.73□□□□□ -0.69
RPS3A-206ENST00000507485 FAM184BQ9ULE4 1060 aa10.73□□□□□ -0.69
RPS3A-206ENST00000507485 SALL3Q9BXA9 1300 aa10.72□□□□□ -0.69
RPS3A-206ENST00000507485 NMT2O60551 498 aa10.72□□□□□ -0.69
RPS3A-206ENST00000507485 ZBED4O75132 1171 aa10.72□□□□□ -0.69
RPS3A-206ENST00000507485 DUSP11O75319 330 aaKnown RBP10.72□□□□□ -0.69
RPS3A-206ENST00000507485 ADH1BP00325 375 aa10.72□□□□□ -0.69
RPS3A-206ENST00000507485 APPP05067 770 aa10.72□□□□□ -0.69
RPS3A-206ENST00000507485 CFHP08603 1231 aa10.72□□□□□ -0.69
RPS3A-206ENST00000507485 RAG1P15918 1043 aa10.72□□□□□ -0.69
RPS3A-206ENST00000507485 CST5P28325 142 aaPredicted RBP10.72□□□□□ -0.69
RPS3A-206ENST00000507485 CDK7P50613 346 aa10.72□□□□□ -0.69
RPS3A-206ENST00000507485 CCDC144BQ3MJ40 725 aa10.72□□□□□ -0.69
RPS3A-206ENST00000507485 SLFN13Q68D06 897 aa10.72□□□□□ -0.69
RPS3A-206ENST00000507485 CCDC144CPQ8IYA2 1237 aa10.72□□□□□ -0.69
RPS3A-206ENST00000507485 ZNF444Q8N0Y2 327 aaPredicted RBP10.72□□□□□ -0.69
RPS3A-206ENST00000507485 MSL3Q8N5Y2 521 aaKnown RBP10.72□□□□□ -0.69
RPS3A-206ENST00000507485 RNPC3Q96LT9 517 aaKnown RBP10.72□□□□□ -0.69
RPS3A-206ENST00000507485 STARD7Q9NQZ5 370 aa10.72□□□□□ -0.69
RPS3A-206ENST00000507485 IL17RBQ9NRM6 502 aa10.72□□□□□ -0.69
RPS3A-206ENST00000507485 TMEM39AQ9NV64 488 aa10.72□□□□□ -0.69
RPS3A-206ENST00000507485 FEM1BQ9UK73 627 aa10.72□□□□□ -0.69
RPS3A-206ENST00000507485 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.72□□□□□ -0.69
RPS3A-206ENST00000507485 TMEM232C9JQI7 657 aa10.71□□□□□ -0.69
RPS3A-206ENST00000507485 TNFRSF10AO00220 468 aa10.71□□□□□ -0.69
RPS3A-206ENST00000507485 TTLL1O95922 423 aa10.71□□□□□ -0.69
RPS3A-206ENST00000507485 ASGR1P07306 291 aa10.71□□□□□ -0.69
RPS3A-206ENST00000507485 ZFYP08048 801 aaPredicted RBP10.71□□□□□ -0.69
RPS3A-206ENST00000507485 C6orf222P0C671 652 aaPredicted RBP10.71□□□□□ -0.69
RPS3A-206ENST00000507485 BMP3P12645 472 aa10.71□□□□□ -0.69
RPS3A-206ENST00000507485 GJA9P57773 515 aa10.71□□□□□ -0.69
RPS3A-206ENST00000507485 BEX3Q00994 111 aa10.71□□□□□ -0.69
RPS3A-206ENST00000507485 TFAP4Q01664 338 aa10.71□□□□□ -0.69
RPS3A-206ENST00000507485 FPGSQ05932 587 aa10.71□□□□□ -0.69
RPS3A-206ENST00000507485 CTDSPL2Q05D32 466 aa10.71□□□□□ -0.69
RPS3A-206ENST00000507485 PPARAQ07869 468 aa10.71□□□□□ -0.69
RPS3A-206ENST00000507485 VPS53Q5VIR6 699 aa10.71□□□□□ -0.69
RPS3A-206ENST00000507485 ANKRD35Q8N283 1001 aa10.71□□□□□ -0.69
RPS3A-206ENST00000507485 FAM133AQ8N9E0 248 aa10.71□□□□□ -0.69
RPS3A-206ENST00000507485 MAFAQ8NHW3 353 aaPredicted RBP10.71□□□□□ -0.69
RPS3A-206ENST00000507485 TOX2Q96NM4 488 aa10.71□□□□□ -0.69
RPS3A-206ENST00000507485 PURBQ96QR8 312 aaKnown RBP10.71□□□□□ -0.69
RPS3A-206ENST00000507485 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.71□□□□□ -0.691e-10■■■□□ 19.1
RPS3A-206ENST00000507485 A1CFQ9NQ94 594 aaKnown RBP10.71□□□□□ -0.69
RPS3A-206ENST00000507485 PRUNE2Q8WUY3 3088 aa10.71□□□□□ -0.7
RPS3A-206ENST00000507485 MOXD2PA6NHM9 499 aa10.7□□□□□ -0.7
RPS3A-206ENST00000507485 GRXCR1A8MXD5 290 aa10.7□□□□□ -0.7
RPS3A-206ENST00000507485 GNAT2P19087 354 aa10.7□□□□□ -0.7
RPS3A-206ENST00000507485 MCCP23508 829 aa10.7□□□□□ -0.7
RPS3A-206ENST00000507485 GRIN2CQ14957 1233 aa10.7□□□□□ -0.7
RPS3A-206ENST00000507485 MUM1L1Q5H9M0 696 aa10.7□□□□□ -0.7
RPS3A-206ENST00000507485 KCTD1Q719H9 257 aa10.7□□□□□ -0.7
RPS3A-206ENST00000507485 USP38Q8NB14 1042 aa10.7□□□□□ -0.7
RPS3A-206ENST00000507485 CHST13Q8NET6 341 aa10.7□□□□□ -0.7
RPS3A-206ENST00000507485 ABHD16BQ9H3Z7 469 aa10.7□□□□□ -0.7
RPS3A-206ENST00000507485 SPTBN5Q9NRC6 3674 aaKnown RBP10.7□□□□□ -0.7
RPS3A-206ENST00000507485 TTC41PQ6P2S7 1318 aa10.7□□□□□ -0.7
RPS3A-206ENST00000507485 VCANP13611 3396 aa10.69□□□□□ -0.7
RPS3A-206ENST00000507485 TIMP1P01033 207 aa10.69□□□□□ -0.7
RPS3A-206ENST00000507485 TSPY3P0CV98 308 aa10.69□□□□□ -0.7
RPS3A-206ENST00000507485 TSPY8P0CW00 308 aa10.69□□□□□ -0.7
RPS3A-206ENST00000507485 OAZ1P54368 228 aa10.69□□□□□ -0.7
RPS3A-206ENST00000507485 NKX3-2P78367 333 aa10.69□□□□□ -0.7
RPS3A-206ENST00000507485 PTGDRQ13258 359 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 112.4 ms