RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 FBXO16Q8IX29 292 aaPredicted RBP10.6□□□□□ -0.71
PDLIM5-209ENST00000506632 STAG2Q8N3U4 1231 aa10.6□□□□□ -0.71
PDLIM5-209ENST00000506632 PCSK9Q8NBP7 692 aaKnown RBP10.6□□□□□ -0.71
PDLIM5-209ENST00000506632 DNERQ8NFT8 737 aa10.6□□□□□ -0.71
PDLIM5-209ENST00000506632 NUP133Q8WUM0 1156 aa10.6□□□□□ -0.71
PDLIM5-209ENST00000506632 TRIM43Q96BQ3 446 aaPredicted RBP10.6□□□□□ -0.71
PDLIM5-209ENST00000506632 MTMR8Q96EF0 704 aa10.6□□□□□ -0.71
PDLIM5-209ENST00000506632 TOX2Q96NM4 488 aa10.6□□□□□ -0.71
PDLIM5-209ENST00000506632 UBE2OQ9C0C9 1292 aaKnown RBP10.6□□□□□ -0.71
PDLIM5-209ENST00000506632 LSG1Q9H089 658 aaKnown RBP10.6□□□□□ -0.71
PDLIM5-209ENST00000506632 JMJD4Q9H9V9 463 aa10.6□□□□□ -0.71
PDLIM5-209ENST00000506632 SPC25Q9HBM1 224 aa10.6□□□□□ -0.71
PDLIM5-209ENST00000506632 STARD7Q9NQZ5 370 aa10.6□□□□□ -0.71
PDLIM5-209ENST00000506632 PDGFCQ9NRA1 345 aa10.6□□□□□ -0.71
PDLIM5-209ENST00000506632 ADD3Q9UEY8 706 aaKnown RBP10.6□□□□□ -0.71
PDLIM5-209ENST00000506632 MAD2L2Q9UI95 211 aa10.6□□□□□ -0.71
PDLIM5-209ENST00000506632 Q9Y3F1 56 aa10.6□□□□□ -0.71
PDLIM5-209ENST00000506632 RBM8AQ9Y5S9 174 aaKnown RBP10.6□□□□□ -0.71
PDLIM5-209ENST00000506632 ABCB11O95342 1321 aa10.59□□□□□ -0.71
PDLIM5-209ENST00000506632 PALM3A6NDB9 673 aaPredicted RBP10.59□□□□□ -0.71
PDLIM5-209ENST00000506632 TULP1O00294 542 aaPredicted RBP10.59□□□□□ -0.71
PDLIM5-209ENST00000506632 KIAA0355O15063 1070 aa10.59□□□□□ -0.71
PDLIM5-209ENST00000506632 ASGR1P07306 291 aa10.59□□□□□ -0.71
PDLIM5-209ENST00000506632 CALML3P27482 149 aa10.59□□□□□ -0.71
PDLIM5-209ENST00000506632 CDK7P50613 346 aa10.59□□□□□ -0.71
PDLIM5-209ENST00000506632 SLC35G1Q2M3R5 365 aa10.59□□□□□ -0.71
PDLIM5-209ENST00000506632 USH1GQ495M9 461 aa10.59□□□□□ -0.71
PDLIM5-209ENST00000506632 BMP2KLQ5H9B9 411 aa10.59□□□□□ -0.71
PDLIM5-209ENST00000506632 GNASQ5JWF2 1037 aa10.59□□□□□ -0.71
PDLIM5-209ENST00000506632 TMEM63BQ5T3F8 832 aa10.59□□□□□ -0.71
PDLIM5-209ENST00000506632 IQSEC1Q6DN90 963 aa10.59□□□□□ -0.71
PDLIM5-209ENST00000506632 EEPD1Q7L9B9 569 aa10.59□□□□□ -0.71
PDLIM5-209ENST00000506632 TLK2Q86UE8 772 aa10.59□□□□□ -0.71
PDLIM5-209ENST00000506632 SKAP1Q86WV1 359 aa10.59□□□□□ -0.71
PDLIM5-209ENST00000506632 MB21D2Q8IYB1 491 aaPredicted RBP10.59□□□□□ -0.71
PDLIM5-209ENST00000506632 NCOA7Q8NI08 942 aa10.59□□□□□ -0.71
PDLIM5-209ENST00000506632 LRCH3Q96II8 777 aa10.59□□□□□ -0.71
PDLIM5-209ENST00000506632 GLT1D1Q96MS3 346 aa10.59□□□□□ -0.71
PDLIM5-209ENST00000506632 LBHD1Q9BQE6 289 aaPredicted RBP10.59□□□□□ -0.71
PDLIM5-209ENST00000506632 ESYT1Q9BSJ8 1104 aa10.59□□□□□ -0.71
PDLIM5-209ENST00000506632 SENP2Q9HC62 589 aa10.59□□□□□ -0.71
PDLIM5-209ENST00000506632 PRKAG2Q9UGJ0 569 aa10.59□□□□□ -0.71
PDLIM5-209ENST00000506632 SZT2Q5T011 3432 aa10.59□□□□□ -0.71
PDLIM5-209ENST00000506632 DNAH12Q6ZR08 3092 aa10.59□□□□□ -0.71
PDLIM5-209ENST00000506632 MYH6P13533 1939 aa10.58□□□□□ -0.72
PDLIM5-209ENST00000506632 LAMA3Q16787 3333 aa10.58□□□□□ -0.72
PDLIM5-209ENST00000506632 KLRF2D3W0D1 207 aa10.58□□□□□ -0.72
PDLIM5-209ENST00000506632 OPLAHO14841 1288 aa10.58□□□□□ -0.72
PDLIM5-209ENST00000506632 IFIT3O14879 490 aaKnown RBP10.58□□□□□ -0.72
PDLIM5-209ENST00000506632 CLTBP09497 229 aa10.58□□□□□ -0.72
PDLIM5-209ENST00000506632 PTGS1P23219 599 aa10.58□□□□□ -0.72
PDLIM5-209ENST00000506632 ITGB8P26012 769 aa10.58□□□□□ -0.72
PDLIM5-209ENST00000506632 BEX3Q00994 111 aa10.58□□□□□ -0.72
PDLIM5-209ENST00000506632 GHRHRQ02643 423 aa10.58□□□□□ -0.72
PDLIM5-209ENST00000506632 FAAP100Q0VG06 881 aa10.58□□□□□ -0.72
PDLIM5-209ENST00000506632 TROAPQ12815 778 aa10.58□□□□□ -0.72
PDLIM5-209ENST00000506632 GRM4Q14833 912 aa10.58□□□□□ -0.72
PDLIM5-209ENST00000506632 DUSP28Q4G0W2 176 aa10.58□□□□□ -0.72
PDLIM5-209ENST00000506632 GPR153Q6NV75 609 aa10.58□□□□□ -0.72
PDLIM5-209ENST00000506632 RALYLQ86SE5 291 aaKnown RBP10.58□□□□□ -0.72
PDLIM5-209ENST00000506632 SLC43A3Q8NBI5 491 aa10.58□□□□□ -0.72
PDLIM5-209ENST00000506632 IGDCC4Q8TDY8 1250 aa10.58□□□□□ -0.72
PDLIM5-209ENST00000506632 TBC1D5Q92609 795 aa10.58□□□□□ -0.72
PDLIM5-209ENST00000506632 MTA3Q9BTC8 594 aa10.58□□□□□ -0.72
PDLIM5-209ENST00000506632 RIOX1Q9H6W3 641 aa10.58□□□□□ -0.72
PDLIM5-209ENST00000506632 PRDM5Q9NQX1 630 aaPredicted RBP10.58□□□□□ -0.72
PDLIM5-209ENST00000506632 A0A0U1RQG5 324 aaPredicted RBP10.57□□□□□ -0.72
PDLIM5-209ENST00000506632 PQBP1O60828 265 aaKnown RBP10.57□□□□□ -0.72
PDLIM5-209ENST00000506632 PPP1R11O60927 126 aaPredicted RBP10.57□□□□□ -0.72
PDLIM5-209ENST00000506632 COL9A3Q14050 684 aaPredicted RBP10.57□□□□□ -0.72
PDLIM5-209ENST00000506632 WTAPQ15007 396 aa10.57□□□□□ -0.72
PDLIM5-209ENST00000506632 SART3Q15020 963 aaKnown RBP10.57□□□□□ -0.72
PDLIM5-209ENST00000506632 NECTIN1Q15223 517 aa10.57□□□□□ -0.72
PDLIM5-209ENST00000506632 FSCN1Q16658 493 aaKnown RBP10.57□□□□□ -0.72
PDLIM5-209ENST00000506632 KIAA1211Q6ZU35 1233 aa10.57□□□□□ -0.72
PDLIM5-209ENST00000506632 FBXO11Q86XK2 927 aa10.57□□□□□ -0.72
PDLIM5-209ENST00000506632 SYTL5Q8TDW5 730 aaPredicted RBP10.57□□□□□ -0.72
PDLIM5-209ENST00000506632 BADQ92934 168 aa10.57□□□□□ -0.72
PDLIM5-209ENST00000506632 COL20A1Q9P218 1284 aa10.57□□□□□ -0.72
PDLIM5-209ENST00000506632 TBX21Q9UL17 535 aa10.57□□□□□ -0.72
PDLIM5-209ENST00000506632 MRPL11Q9Y3B7 192 aaKnown RBP10.57□□□□□ -0.72
PDLIM5-209ENST00000506632 MROH7Q68CQ1 1323 aa10.57□□□□□ -0.72
PDLIM5-209ENST00000506632 ERICH2A1L162 156 aa10.56□□□□□ -0.72
PDLIM5-209ENST00000506632 DCDC2CA8MYV0 355 aa10.56□□□□□ -0.72
PDLIM5-209ENST00000506632 ARVCFO00192 962 aa10.56□□□□□ -0.72
PDLIM5-209ENST00000506632 SLC27A2O14975 620 aa10.56□□□□□ -0.72
PDLIM5-209ENST00000506632 ZBTB5O15062 677 aa10.56□□□□□ -0.72
PDLIM5-209ENST00000506632 DYNC1LI2O43237 492 aaPredicted RBP10.56□□□□□ -0.72
PDLIM5-209ENST00000506632 CYTH3O43739 400 aa10.56□□□□□ -0.72
PDLIM5-209ENST00000506632 CABYRO75952 493 aa10.56□□□□□ -0.72
PDLIM5-209ENST00000506632 HSD17B4P51659 736 aa10.56□□□□□ -0.72
PDLIM5-209ENST00000506632 TMEM67Q5HYA8 995 aa10.56□□□□□ -0.72
PDLIM5-209ENST00000506632 CXCL17Q6UXB2 119 aa10.56□□□□□ -0.72
PDLIM5-209ENST00000506632 NOL8Q76FK4 1167 aaKnown RBP10.56□□□□□ -0.72
PDLIM5-209ENST00000506632 CHST3Q7LGC8 479 aa10.56□□□□□ -0.72
PDLIM5-209ENST00000506632 MCF2L2Q86YR7 1114 aa10.56□□□□□ -0.72
PDLIM5-209ENST00000506632 FAM126BQ8IXS8 530 aa10.56□□□□□ -0.72
PDLIM5-209ENST00000506632 TAAR1Q96RJ0 339 aa10.56□□□□□ -0.72
PDLIM5-209ENST00000506632 MAP3K14Q99558 947 aa10.56□□□□□ -0.72
PDLIM5-209ENST00000506632 AMNQ9BXJ7 453 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms