RNA–Protein interactions for RNA: ENST00000506573.1

DDR1-258, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-258ENST00000506573 CASC1Q6TDU7 716 aa18.11■□□□□ 0.49
DDR1-258ENST00000506573 FBXO16Q8IX29 292 aaPredicted RBP18.11■□□□□ 0.49
DDR1-258ENST00000506573 IL25Q9H293 177 aa18.11■□□□□ 0.49
DDR1-258ENST00000506573 VAT1LQ9HCJ6 419 aa18.11■□□□□ 0.49
DDR1-258ENST00000506573 KLRF2D3W0D1 207 aa18.1■□□□□ 0.49
DDR1-258ENST00000506573 NKRFO15226 690 aaKnown RBP eCLIP18.1■□□□□ 0.49
DDR1-258ENST00000506573 PTH1RQ03431 593 aa18.1■□□□□ 0.49
DDR1-258ENST00000506573 WTAPQ15007 396 aa18.1■□□□□ 0.49
DDR1-258ENST00000506573 SLC30A10Q6XR72 485 aa18.1■□□□□ 0.49
DDR1-258ENST00000506573 CATIPQ7Z7H3 387 aa18.1■□□□□ 0.49
DDR1-258ENST00000506573 BADQ92934 168 aa18.1■□□□□ 0.49
DDR1-258ENST00000506573 AMNQ9BXJ7 453 aa18.1■□□□□ 0.49
DDR1-258ENST00000506573 WDR11Q9BZH6 1224 aa18.1■□□□□ 0.49
DDR1-258ENST00000506573 GPHNQ9NQX3 736 aaPredicted RBP18.1■□□□□ 0.49
DDR1-258ENST00000506573 GNEQ9Y223 722 aaKnown RBP18.1■□□□□ 0.49
DDR1-258ENST00000506573 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.09■□□□□ 0.49
DDR1-258ENST00000506573 MYADML2A6NDP7 307 aa18.09■□□□□ 0.49
DDR1-258ENST00000506573 E7EWF7 191 aa18.09■□□□□ 0.49
DDR1-258ENST00000506573 ARVCFO00192 962 aa18.09■□□□□ 0.49
DDR1-258ENST00000506573 KIAA0355O15063 1070 aa18.09■□□□□ 0.49
DDR1-258ENST00000506573 SMPD1P17405 629 aa18.09■□□□□ 0.49
DDR1-258ENST00000506573 CPT1AP50416 773 aa18.09■□□□□ 0.49
DDR1-258ENST00000506573 DUSP28Q4G0W2 176 aa18.09■□□□□ 0.49
DDR1-258ENST00000506573 TAPT1Q6NXT6 567 aa18.09■□□□□ 0.49
DDR1-258ENST00000506573 NSUN6Q8TEA1 469 aaKnown RBP18.09■□□□□ 0.49
DDR1-258ENST00000506573 SCFD2Q8WU76 684 aa18.09■□□□□ 0.49
DDR1-258ENST00000506573 MAP4K1Q92918 833 aa18.09■□□□□ 0.49
DDR1-258ENST00000506573 ASTN1O14525 1302 aa18.08■□□□□ 0.49
DDR1-258ENST00000506573 TRIM43BA6NCK2 446 aa18.08■□□□□ 0.48
DDR1-258ENST00000506573 ADCY6O43306 1168 aa18.08■□□□□ 0.48
DDR1-258ENST00000506573 BEX3Q00994 111 aa18.08■□□□□ 0.48
DDR1-258ENST00000506573 PPP2R5BQ15173 497 aa18.08■□□□□ 0.48
DDR1-258ENST00000506573 SEC23AQ15436 765 aa18.08■□□□□ 0.48
DDR1-258ENST00000506573 QRICH1Q2TAL8 776 aa18.08■□□□□ 0.48
DDR1-258ENST00000506573 TMEM67Q5HYA8 995 aa18.08■□□□□ 0.48
DDR1-258ENST00000506573 CYB5R4Q7L1T6 521 aa18.08■□□□□ 0.48
DDR1-258ENST00000506573 TRIM43Q96BQ3 446 aaPredicted RBP18.08■□□□□ 0.48
DDR1-258ENST00000506573 LRCH3Q96II8 777 aa18.08■□□□□ 0.48
DDR1-258ENST00000506573 PURBQ96QR8 312 aaKnown RBP18.08■□□□□ 0.48
DDR1-258ENST00000506573 CPVLQ9H3G5 476 aa18.08■□□□□ 0.48
DDR1-258ENST00000506573 JMJD4Q9H9V9 463 aa18.08■□□□□ 0.48
DDR1-258ENST00000506573 PDGFCQ9NRA1 345 aa18.08■□□□□ 0.48
DDR1-258ENST00000506573 POLR3EQ9NVU0 708 aa18.08■□□□□ 0.48
DDR1-258ENST00000506573 RBM8AQ9Y5S9 174 aaKnown RBP18.08■□□□□ 0.48
DDR1-258ENST00000506573 SOX1O00570 391 aaPredicted RBP18.07■□□□□ 0.48
DDR1-258ENST00000506573 ZBTB5O15062 677 aa18.07■□□□□ 0.48
DDR1-258ENST00000506573 FPGSQ05932 587 aa18.07■□□□□ 0.48
DDR1-258ENST00000506573 FAAP100Q0VG06 881 aa18.07■□□□□ 0.48
DDR1-258ENST00000506573 SH3RF1Q7Z6J0 888 aa18.07■□□□□ 0.48
DDR1-258ENST00000506573 TMTC2Q8N394 836 aa18.07■□□□□ 0.48
DDR1-258ENST00000506573 SAMD3Q8N6K7 520 aa18.07■□□□□ 0.48
DDR1-258ENST00000506573 IWS1Q96ST2 819 aa18.07■□□□□ 0.48
DDR1-258ENST00000506573 MAP3K20Q9NYL2 800 aaKnown RBP18.07■□□□□ 0.48
DDR1-258ENST00000506573 KPNA6O60684 536 aa18.06■□□□□ 0.48
DDR1-258ENST00000506573 KIF5BP33176 963 aa18.06■□□□□ 0.48
DDR1-258ENST00000506573 CDK7P50613 346 aa18.06■□□□□ 0.48
DDR1-258ENST00000506573 TTLL4Q14679 1199 aa18.06■□□□□ 0.48
DDR1-258ENST00000506573 BMP2KLQ5H9B9 411 aa18.06■□□□□ 0.48
DDR1-258ENST00000506573 RNF20Q5VTR2 975 aa18.06■□□□□ 0.48
DDR1-258ENST00000506573 ARHGEF16Q5VV41 709 aa18.06■□□□□ 0.48
DDR1-258ENST00000506573 CXCL17Q6UXB2 119 aa18.06■□□□□ 0.48
DDR1-258ENST00000506573 OR6J1Q8NGC5 347 aa18.06■□□□□ 0.48
DDR1-258ENST00000506573 RMDN3Q96TC7 470 aa18.06■□□□□ 0.48
DDR1-258ENST00000506573 MTA3Q9BTC8 594 aa18.06■□□□□ 0.48
DDR1-258ENST00000506573 MAD2L2Q9UI95 211 aa18.06■□□□□ 0.48
DDR1-258ENST00000506573 LAMA3Q16787 3333 aa18.05■□□□□ 0.48
DDR1-258ENST00000506573 RBM47A0AV96 593 aaKnown RBP18.05■□□□□ 0.48
DDR1-258ENST00000506573 PALM3A6NDB9 673 aaPredicted RBP18.05■□□□□ 0.48
DDR1-258ENST00000506573 TIMP1P01033 207 aa18.05■□□□□ 0.48
DDR1-258ENST00000506573 EDNRBP24530 442 aa18.05■□□□□ 0.48
DDR1-258ENST00000506573 MCM5P33992 734 aa18.05■□□□□ 0.48
DDR1-258ENST00000506573 ITGA7Q13683 1181 aa18.05■□□□□ 0.48
DDR1-258ENST00000506573 GRM4Q14833 912 aa18.05■□□□□ 0.48
DDR1-258ENST00000506573 STXBP2Q15833 593 aa18.05■□□□□ 0.48
DDR1-258ENST00000506573 TMEM199Q8N511 208 aa18.05■□□□□ 0.48
DDR1-258ENST00000506573 DEFB123Q8N688 67 aa18.05■□□□□ 0.48
DDR1-258ENST00000506573 ESYT1Q9BSJ8 1104 aa18.05■□□□□ 0.48
DDR1-258ENST00000506573 ANO2Q9NQ90 1003 aa18.05■□□□□ 0.48
DDR1-258ENST00000506573 PCDHA1Q9Y5I3 950 aa18.05■□□□□ 0.48
DDR1-258ENST00000506573 MCM3APO60318 1980 aa18.04■□□□□ 0.48
DDR1-258ENST00000506573 CTAGE5O15320 804 aa18.04■□□□□ 0.48
DDR1-258ENST00000506573 CFBP00751 764 aa18.04■□□□□ 0.48
DDR1-258ENST00000506573 TXNP10599 105 aaKnown RBP18.04■□□□□ 0.48
DDR1-258ENST00000506573 PPIGQ13427 754 aaKnown RBP eCLIP18.04■□□□□ 0.48
DDR1-258ENST00000506573 NFXL1Q6ZNB6 911 aa18.04■□□□□ 0.48
DDR1-258ENST00000506573 STAG2Q8N3U4 1231 aa18.04■□□□□ 0.48
DDR1-258ENST00000506573 CTCFLQ8NI51 663 aaPredicted RBP18.04■□□□□ 0.48
DDR1-258ENST00000506573 SYTL5Q8TDW5 730 aaPredicted RBP18.04■□□□□ 0.48
DDR1-258ENST00000506573 DDX49Q9Y6V7 483 aaKnown RBP18.04■□□□□ 0.48
DDR1-258ENST00000506573 SZT2Q5T011 3432 aa18.04■□□□□ 0.48
DDR1-258ENST00000506573 CCDC69A6NI79 296 aa18.03■□□□□ 0.48
DDR1-258ENST00000506573 SUPT20HL2P0C7V6 817 aa18.03■□□□□ 0.48
DDR1-258ENST00000506573 GNAQP50148 359 aa18.03■□□□□ 0.48
DDR1-258ENST00000506573 SHHQ15465 462 aa18.03■□□□□ 0.48
DDR1-258ENST00000506573 MFSD5Q6N075 450 aa18.03■□□□□ 0.48
DDR1-258ENST00000506573 HOMER1Q86YM7 354 aa18.03■□□□□ 0.48
DDR1-258ENST00000506573 TMEM87BQ96K49 555 aa18.03■□□□□ 0.48
DDR1-258ENST00000506573 MAP3K14Q99558 947 aa18.03■□□□□ 0.48
DDR1-258ENST00000506573 LZTS2Q9BRK4 669 aa18.03■□□□□ 0.48
DDR1-258ENST00000506573 TBX21Q9UL17 535 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms