RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 PTPRCP08575 1304 aa8.57□□□□□ -1.04
VCAN-206ENST00000505615 TPRP12270 2363 aaKnown RBP8.57□□□□□ -1.04
VCAN-206ENST00000505615 A0A0U1RQG5 324 aaPredicted RBP8.57□□□□□ -1.04
VCAN-206ENST00000505615 A0A1W2PRG0 241 aa8.57□□□□□ -1.04
VCAN-206ENST00000505615 H3BM21 787 aa8.57□□□□□ -1.04
VCAN-206ENST00000505615 CAPN5O15484 640 aaPredicted RBP8.57□□□□□ -1.04
VCAN-206ENST00000505615 ADCY6O43306 1168 aa8.57□□□□□ -1.04
VCAN-206ENST00000505615 HLA-DOAP06340 250 aa8.57□□□□□ -1.04
VCAN-206ENST00000505615 PGK2P07205 417 aa8.57□□□□□ -1.04
VCAN-206ENST00000505615 FCER1AP12319 257 aa8.57□□□□□ -1.04
VCAN-206ENST00000505615 SH3BP2P78314 561 aa8.57□□□□□ -1.04
VCAN-206ENST00000505615 TFCP2Q12800 502 aa8.57□□□□□ -1.04
VCAN-206ENST00000505615 NCAPG2Q86XI2 1143 aa8.57□□□□□ -1.04
VCAN-206ENST00000505615 MB21D1Q8N884 522 aa8.57□□□□□ -1.04
VCAN-206ENST00000505615 ATG4CQ96DT6 458 aa8.57□□□□□ -1.04
VCAN-206ENST00000505615 UPF3AQ9H1J1 476 aaKnown RBP8.57□□□□□ -1.04
VCAN-206ENST00000505615 KCNH6Q9H252 994 aa8.57□□□□□ -1.04
VCAN-206ENST00000505615 HOXC10Q9NYD6 342 aa8.57□□□□□ -1.04
VCAN-206ENST00000505615 DIS3Q9Y2L1 958 aaKnown RBP8.57□□□□□ -1.04
VCAN-206ENST00000505615 DCHS1Q96JQ0 3298 aa8.57□□□□□ -1.04
VCAN-206ENST00000505615 TANC1Q9C0D5 1861 aa8.57□□□□□ -1.04
VCAN-206ENST00000505615 GVINP1Q7Z2Y8 2422 aa8.56□□□□□ -1.04
VCAN-206ENST00000505615 TRIP12Q14669 1992 aaPredicted RBP8.56□□□□□ -1.04
VCAN-206ENST00000505615 CTAGE5O15320 804 aa8.56□□□□□ -1.04
VCAN-206ENST00000505615 LPXNO60711 386 aa8.56□□□□□ -1.04
VCAN-206ENST00000505615 BAG3O95817 575 aa8.56□□□□□ -1.04
VCAN-206ENST00000505615 ASGR1P07306 291 aa8.56□□□□□ -1.04
VCAN-206ENST00000505615 CA3P07451 260 aa8.56□□□□□ -1.04
VCAN-206ENST00000505615 SHMT1P34896 483 aa8.56□□□□□ -1.04
VCAN-206ENST00000505615 DYNLL1P63167 89 aaKnown RBP8.56□□□□□ -1.04
VCAN-206ENST00000505615 TMEM132BQ14DG7 1078 aa8.56□□□□□ -1.04
VCAN-206ENST00000505615 ABCB5Q2M3G0 1257 aa8.56□□□□□ -1.04
VCAN-206ENST00000505615 NAA16Q6N069 864 aaPredicted RBP8.56□□□□□ -1.04
VCAN-206ENST00000505615 ATF7IPQ6VMQ6 1270 aa8.56□□□□□ -1.04
VCAN-206ENST00000505615 SPRED2Q7Z698 418 aa8.56□□□□□ -1.04
VCAN-206ENST00000505615 FAM178BQ8IXR5 827 aa8.56□□□□□ -1.04
VCAN-206ENST00000505615 ANKS1AQ92625 1134 aa8.56□□□□□ -1.04
VCAN-206ENST00000505615 IRF7Q92985 503 aa8.56□□□□□ -1.04
VCAN-206ENST00000505615 GLT1D1Q96MS3 346 aa8.56□□□□□ -1.04
VCAN-206ENST00000505615 MMP19Q99542 508 aa8.56□□□□□ -1.04
VCAN-206ENST00000505615 NOL10Q9BSC4 688 aaKnown RBP8.56□□□□□ -1.04
VCAN-206ENST00000505615 NOC4LQ9BVI4 516 aaKnown RBP8.56□□□□□ -1.04
VCAN-206ENST00000505615 TANGO6Q9C0B7 1094 aa8.56□□□□□ -1.04
VCAN-206ENST00000505615 WNT8AQ9H1J5 351 aa8.56□□□□□ -1.04
VCAN-206ENST00000505615 EHD4Q9H223 541 aa8.56□□□□□ -1.04
VCAN-206ENST00000505615 CERS4Q9HA82 394 aa8.56□□□□□ -1.04
VCAN-206ENST00000505615 LRP2BPQ9P2M1 347 aa8.56□□□□□ -1.04
VCAN-206ENST00000505615 SERPINB13Q9UIV8 391 aa8.56□□□□□ -1.04
VCAN-206ENST00000505615 PCDHGC3Q9UN70 934 aa8.56□□□□□ -1.04
VCAN-206ENST00000505615 SLC4A7Q9Y6M7 1214 aa8.56□□□□□ -1.04
VCAN-206ENST00000505615 SIP14410 1827 aa8.56□□□□□ -1.04
VCAN-206ENST00000505615 CACNA1GO43497 2377 aa8.56□□□□□ -1.04
VCAN-206ENST00000505615 EPG5Q9HCE0 2579 aa8.56□□□□□ -1.04
VCAN-206ENST00000505615 FAM181BA6NEQ2 426 aa8.55□□□□□ -1.04
VCAN-206ENST00000505615 TLR3O15455 904 aaKnown RBP8.55□□□□□ -1.04
VCAN-206ENST00000505615 DUSP11O75319 330 aaKnown RBP8.55□□□□□ -1.04
VCAN-206ENST00000505615 SLC25A27O95847 323 aa8.55□□□□□ -1.04
VCAN-206ENST00000505615 SNAI1O95863 264 aaPredicted RBP8.55□□□□□ -1.04
VCAN-206ENST00000505615 CCNYL3P0C7X3 344 aa8.55□□□□□ -1.04
VCAN-206ENST00000505615 UBTFL1P0CB47 393 aaPredicted RBP8.55□□□□□ -1.04
VCAN-206ENST00000505615 ATP2A2P16615 1042 aaKnown RBP8.55□□□□□ -1.04
VCAN-206ENST00000505615 CLCN1P35523 988 aa8.55□□□□□ -1.04
VCAN-206ENST00000505615 TAP1Q03518 808 aa8.55□□□□□ -1.04
VCAN-206ENST00000505615 PLS1Q14651 629 aa8.55□□□□□ -1.04
VCAN-206ENST00000505615 TTLL4Q14679 1199 aa8.55□□□□□ -1.04
VCAN-206ENST00000505615 SEPT2Q15019 361 aa8.55□□□□□ -1.04
VCAN-206ENST00000505615 CERKLQ49MI3 558 aaPredicted RBP8.55□□□□□ -1.04
VCAN-206ENST00000505615 SLC43A3Q8NBI5 491 aa8.55□□□□□ -1.04
VCAN-206ENST00000505615 UIMC1Q96RL1 719 aa8.55□□□□□ -1.04
VCAN-206ENST00000505615 HIPK3Q9H422 1215 aa8.55□□□□□ -1.04
VCAN-206ENST00000505615 AKAP2Q9Y2D5 859 aa8.55□□□□□ -1.04
VCAN-206ENST00000505615 WASF2Q9Y6W5 498 aa8.55□□□□□ -1.04
VCAN-206ENST00000505615 SCN10AQ9Y5Y9 1956 aa8.54□□□□□ -1.04
VCAN-206ENST00000505615 KMT2EQ8IZD2 1858 aa8.54□□□□□ -1.04
VCAN-206ENST00000505615 C6orf222P0C671 652 aaPredicted RBP8.54□□□□□ -1.04
VCAN-206ENST00000505615 CCL23P55773 120 aa8.54□□□□□ -1.04
VCAN-206ENST00000505615 GJA9P57773 515 aa8.54□□□□□ -1.04
VCAN-206ENST00000505615 GABPAQ06546 454 aa8.54□□□□□ -1.04
VCAN-206ENST00000505615 GRB10Q13322 594 aa8.54□□□□□ -1.04
VCAN-206ENST00000505615 PTPRNQ16849 979 aa8.54□□□□□ -1.04
VCAN-206ENST00000505615 TMEM67Q5HYA8 995 aa8.54□□□□□ -1.04
VCAN-206ENST00000505615 RIOX2Q8IUF8 465 aa8.54□□□□□ -1.04
VCAN-206ENST00000505615 GJD3Q8N144 294 aa8.54□□□□□ -1.04
VCAN-206ENST00000505615 ZSCAN1Q8NBB4 408 aa8.54□□□□□ -1.04
VCAN-206ENST00000505615 PCSK9Q8NBP7 692 aaKnown RBP8.54□□□□□ -1.04
VCAN-206ENST00000505615 FAM184BQ9ULE4 1060 aa8.54□□□□□ -1.04
VCAN-206ENST00000505615 ADAMTS5Q9UNA0 930 aa8.54□□□□□ -1.04
VCAN-206ENST00000505615 CNPY2Q9Y2B0 182 aa8.54□□□□□ -1.04
VCAN-206ENST00000505615 ATG2AQ2TAZ0 1938 aa8.54□□□□□ -1.04
VCAN-206ENST00000505615 BAZ2AQ9UIF9 1905 aaKnown RBP8.54□□□□□ -1.04
VCAN-206ENST00000505615 ZBBXA8MT70 800 aa8.53□□□□□ -1.04
VCAN-206ENST00000505615 FLOT1O75955 427 aa8.53□□□□□ -1.04
VCAN-206ENST00000505615 CYP2E1P05181 493 aaPredicted RBP8.53□□□□□ -1.04
VCAN-206ENST00000505615 UQCRFS1P1P0C7P4 283 aa8.53□□□□□ -1.04
VCAN-206ENST00000505615 MS4A1P11836 297 aa8.53□□□□□ -1.04
VCAN-206ENST00000505615 IL9P15248 144 aa8.53□□□□□ -1.04
VCAN-206ENST00000505615 PLCD1P51178 756 aa8.53□□□□□ -1.04
VCAN-206ENST00000505615 NKX3-2P78367 333 aa8.53□□□□□ -1.04
VCAN-206ENST00000505615 MAMDC4Q6UXC1 1216 aa8.53□□□□□ -1.04
VCAN-206ENST00000505615 MSL3Q8N5Y2 521 aaKnown RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms