RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 CNTN2Q02246 1040 aa18.97■□□□□ 0.63
PDLIM7-213ENST00000505074 TAP1Q03518 808 aa18.97■□□□□ 0.63
PDLIM7-213ENST00000505074 ALDH8A1Q9H2A2 487 aaPredicted RBP18.97■□□□□ 0.63
PDLIM7-213ENST00000505074 MTMR4Q9NYA4 1195 aa18.97■□□□□ 0.63
PDLIM7-213ENST00000505074 COL4A4P53420 1690 aaPredicted RBP18.97■□□□□ 0.63
PDLIM7-213ENST00000505074 PRR33A8MZF0 331 aa18.96■□□□□ 0.63
PDLIM7-213ENST00000505074 TFAP4Q01664 338 aa18.96■□□□□ 0.63
PDLIM7-213ENST00000505074 GRB10Q13322 594 aa18.96■□□□□ 0.63
PDLIM7-213ENST00000505074 FAM133AQ8N9E0 248 aa18.96■□□□□ 0.63
PDLIM7-213ENST00000505074 HOMER2Q9NSB8 354 aa18.96■□□□□ 0.63
PDLIM7-213ENST00000505074 FEM1BQ9UK73 627 aa18.96■□□□□ 0.63
PDLIM7-213ENST00000505074 Q9Y3F1 56 aa18.96■□□□□ 0.63
PDLIM7-213ENST00000505074 TSPY2A6NKD2 308 aa18.95■□□□□ 0.62
PDLIM7-213ENST00000505074 SMPD1P17405 629 aa18.95■□□□□ 0.62
PDLIM7-213ENST00000505074 SLFN13Q68D06 897 aa18.95■□□□□ 0.62
PDLIM7-213ENST00000505074 IQSEC1Q6DN90 963 aa18.95■□□□□ 0.62
PDLIM7-213ENST00000505074 NEDD1Q8NHV4 660 aa18.95■□□□□ 0.62
PDLIM7-213ENST00000505074 ACAD9Q9H845 621 aa18.95■□□□□ 0.62
PDLIM7-213ENST00000505074 PLIN4Q96Q06 1357 aa18.94■□□□□ 0.62
PDLIM7-213ENST00000505074 CYP2C9P11712 490 aa18.94■□□□□ 0.62
PDLIM7-213ENST00000505074 BMP3P12645 472 aa18.94■□□□□ 0.62
PDLIM7-213ENST00000505074 RFC2P35250 354 aa18.94■□□□□ 0.62
PDLIM7-213ENST00000505074 CTDSPL2Q05D32 466 aa18.94■□□□□ 0.62
PDLIM7-213ENST00000505074 HERC6Q8IVU3 1022 aa18.94■□□□□ 0.62
PDLIM7-213ENST00000505074 GMCL1P1Q8NEA9 526 aa18.94■□□□□ 0.62
PDLIM7-213ENST00000505074 MKL1Q969V6 931 aa18.94■□□□□ 0.62
PDLIM7-213ENST00000505074 CD320Q9NPF0 282 aa18.94■□□□□ 0.62
PDLIM7-213ENST00000505074 TRMT13Q9NUP7 481 aaKnown RBP18.94■□□□□ 0.62
PDLIM7-213ENST00000505074 STX8Q9UNK0 236 aa18.94■□□□□ 0.62
PDLIM7-213ENST00000505074 MTMR7Q9Y216 660 aa18.94■□□□□ 0.62
PDLIM7-213ENST00000505074 TANC1Q9C0D5 1861 aa18.94■□□□□ 0.62
PDLIM7-213ENST00000505074 TNKSO95271 1327 aa18.94■□□□□ 0.62
PDLIM7-213ENST00000505074 SOWAHBA6NEL2 793 aa18.93■□□□□ 0.62
PDLIM7-213ENST00000505074 TMEM232C9JQI7 657 aa18.93■□□□□ 0.62
PDLIM7-213ENST00000505074 FDX1P10109 184 aa18.93■□□□□ 0.62
PDLIM7-213ENST00000505074 MRE11P49959 708 aa18.93■□□□□ 0.62
PDLIM7-213ENST00000505074 EVI5LQ96CN4 794 aa18.93■□□□□ 0.62
PDLIM7-213ENST00000505074 TOMM22Q9NS69 142 aa18.93■□□□□ 0.62
PDLIM7-213ENST00000505074 LMCD1Q9NZU5 365 aa18.93■□□□□ 0.62
PDLIM7-213ENST00000505074 SYNPO2Q9UMS6 1093 aa18.93■□□□□ 0.62
PDLIM7-213ENST00000505074 RANBP6O60518 1105 aaKnown RBP18.92■□□□□ 0.62
PDLIM7-213ENST00000505074 ARHGEF15O94989 841 aa18.92■□□□□ 0.62
PDLIM7-213ENST00000505074 PTGS1P23219 599 aa18.92■□□□□ 0.62
PDLIM7-213ENST00000505074 SLC1A4P43007 532 aa18.92■□□□□ 0.62
PDLIM7-213ENST00000505074 STAT2P52630 851 aa18.92■□□□□ 0.62
PDLIM7-213ENST00000505074 PPP4R3BQ5MIZ7 849 aa18.92■□□□□ 0.62
PDLIM7-213ENST00000505074 FTOQ9C0B1 505 aaKnown RBP eCLIP18.92■□□□□ 0.62
PDLIM7-213ENST00000505074 A1CFQ9NQ94 594 aaKnown RBP18.92■□□□□ 0.62
PDLIM7-213ENST00000505074 PDGFCQ9NRA1 345 aa18.92■□□□□ 0.62
PDLIM7-213ENST00000505074 POLR3EQ9NVU0 708 aa18.92■□□□□ 0.62
PDLIM7-213ENST00000505074 SALL3Q9BXA9 1300 aa18.92■□□□□ 0.62
PDLIM7-213ENST00000505074 PTPRSQ13332 1948 aa18.92■□□□□ 0.62
PDLIM7-213ENST00000505074 LPXNO60711 386 aa18.91■□□□□ 0.62
PDLIM7-213ENST00000505074 PDE1AP54750 535 aa18.91■□□□□ 0.62
PDLIM7-213ENST00000505074 CSPP1Q1MSJ5 1256 aa18.91■□□□□ 0.62
PDLIM7-213ENST00000505074 TAPT1Q6NXT6 567 aa18.91■□□□□ 0.62
PDLIM7-213ENST00000505074 EEPD1Q7L9B9 569 aa18.91■□□□□ 0.62
PDLIM7-213ENST00000505074 GJD3Q8N144 294 aa18.91■□□□□ 0.62
PDLIM7-213ENST00000505074 RETREG2Q8NC44 543 aa18.91■□□□□ 0.62
PDLIM7-213ENST00000505074 UIMC1Q96RL1 719 aa18.91■□□□□ 0.62
PDLIM7-213ENST00000505074 RNF146Q9NTX7 359 aa18.91■□□□□ 0.62
PDLIM7-213ENST00000505074 BRWD1Q9NSI6 2320 aa18.9■□□□□ 0.62
PDLIM7-213ENST00000505074 TRIM6-TRIM34B2RNG4 842 aa18.9■□□□□ 0.62
PDLIM7-213ENST00000505074 ALADP13716 330 aa18.9■□□□□ 0.62
PDLIM7-213ENST00000505074 MCCP23508 829 aa18.9■□□□□ 0.62
PDLIM7-213ENST00000505074 HDAC1Q13547 482 aaPredicted RBP18.9■□□□□ 0.62
PDLIM7-213ENST00000505074 RRP12Q5JTH9 1297 aaKnown RBP18.9■□□□□ 0.62
PDLIM7-213ENST00000505074 VPS53Q5VIR6 699 aa18.9■□□□□ 0.62
PDLIM7-213ENST00000505074 KIAA1211Q6ZU35 1233 aa18.9■□□□□ 0.62
PDLIM7-213ENST00000505074 FAM160B2Q86V87 743 aa18.9■□□□□ 0.62
PDLIM7-213ENST00000505074 FBXO16Q8IX29 292 aaPredicted RBP18.9■□□□□ 0.62
PDLIM7-213ENST00000505074 CHURC1Q8WUH1 139 aa18.9■□□□□ 0.62
PDLIM7-213ENST00000505074 LNPKQ9C0E8 428 aa18.9■□□□□ 0.62
PDLIM7-213ENST00000505074 INCENPQ9NQS7 918 aa18.9■□□□□ 0.62
PDLIM7-213ENST00000505074 TET1Q8NFU7 2136 aa18.89■□□□□ 0.62
PDLIM7-213ENST00000505074 PITPNM1O00562 1244 aa18.89■□□□□ 0.61
PDLIM7-213ENST00000505074 NMT2O60551 498 aa18.89■□□□□ 0.61
PDLIM7-213ENST00000505074 BAIAP3O94812 1187 aa18.89■□□□□ 0.61
PDLIM7-213ENST00000505074 IQCF3P0C7M6 154 aa18.89■□□□□ 0.61
PDLIM7-213ENST00000505074 SSTR3P32745 418 aaPredicted RBP18.89■□□□□ 0.61
PDLIM7-213ENST00000505074 KCNJ6P48051 423 aa18.89■□□□□ 0.61
PDLIM7-213ENST00000505074 CCDC96Q2M329 555 aa18.89■□□□□ 0.61
PDLIM7-213ENST00000505074 TKFCQ3LXA3 575 aa18.89■□□□□ 0.61
PDLIM7-213ENST00000505074 B4GALNT3Q6L9W6 998 aa18.89■□□□□ 0.61
PDLIM7-213ENST00000505074 KCTD1Q719H9 257 aa18.89■□□□□ 0.61
PDLIM7-213ENST00000505074 FAM178BQ8IXR5 827 aa18.89■□□□□ 0.61
PDLIM7-213ENST00000505074 RILPL2Q969X0 211 aa18.89■□□□□ 0.61
PDLIM7-213ENST00000505074 UBE2ZQ9H832 354 aaPredicted RBP18.89■□□□□ 0.61
PDLIM7-213ENST00000505074 VTA1Q9NP79 307 aa18.89■□□□□ 0.61
PDLIM7-213ENST00000505074 GPHNQ9NQX3 736 aaPredicted RBP18.89■□□□□ 0.61
PDLIM7-213ENST00000505074 HELLSQ9NRZ9 838 aa18.89■□□□□ 0.61
PDLIM7-213ENST00000505074 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.89■□□□□ 0.61
PDLIM7-213ENST00000505074 TRIP12Q14669 1992 aaPredicted RBP18.89■□□□□ 0.61
PDLIM7-213ENST00000505074 FOXP2O15409 715 aa18.88■□□□□ 0.61
PDLIM7-213ENST00000505074 CPT1AP50416 773 aa18.88■□□□□ 0.61
PDLIM7-213ENST00000505074 FAM47CQ5HY64 1035 aa18.88■□□□□ 0.61
PDLIM7-213ENST00000505074 TMEM63BQ5T3F8 832 aa18.88■□□□□ 0.61
PDLIM7-213ENST00000505074 GDPD5Q8WTR4 605 aa18.88■□□□□ 0.61
PDLIM7-213ENST00000505074 STAG1Q8WVM7 1258 aa18.88■□□□□ 0.61
PDLIM7-213ENST00000505074 GMCL1Q96IK5 515 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms