RNA–Protein interactions for RNA: ENST00000505054.2

SYNE4-207, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 713 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-207ENST00000505054 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.58■□□□□ 0.72
SYNE4-207ENST00000505054 CCDC144CPQ8IYA2 1237 aa19.58■□□□□ 0.72
SYNE4-207ENST00000505054 MTMR8Q96EF0 704 aa19.58■□□□□ 0.72
SYNE4-207ENST00000505054 FAM161BQ96MY7 647 aa19.58■□□□□ 0.72
SYNE4-207ENST00000505054 RIOX1Q9H6W3 641 aa19.58■□□□□ 0.72
SYNE4-207ENST00000505054 VAT1LQ9HCJ6 419 aa19.58■□□□□ 0.72
SYNE4-207ENST00000505054 RNF146Q9NTX7 359 aa19.58■□□□□ 0.72
SYNE4-207ENST00000505054 NRBP1Q9UHY1 535 aa19.58■□□□□ 0.72
SYNE4-207ENST00000505054 DHX16O60231 1041 aaKnown RBP19.57■□□□□ 0.72
SYNE4-207ENST00000505054 PLEKHA8P1O95397 391 aa19.57■□□□□ 0.72
SYNE4-207ENST00000505054 MYCNP04198 464 aaPredicted RBP19.57■□□□□ 0.72
SYNE4-207ENST00000505054 ALAS1P13196 640 aa19.57■□□□□ 0.72
SYNE4-207ENST00000505054 KIF5BP33176 963 aa19.57■□□□□ 0.72
SYNE4-207ENST00000505054 ADCYAP1R1P41586 468 aa19.57■□□□□ 0.72
SYNE4-207ENST00000505054 TOB2Q14106 344 aaPredicted RBP19.57■□□□□ 0.72
SYNE4-207ENST00000505054 SHHQ15465 462 aa19.57■□□□□ 0.72
SYNE4-207ENST00000505054 QRICH1Q2TAL8 776 aa19.57■□□□□ 0.72
SYNE4-207ENST00000505054 TKFCQ3LXA3 575 aa19.57■□□□□ 0.72
SYNE4-207ENST00000505054 FANCBQ8NB91 859 aa19.57■□□□□ 0.72
SYNE4-207ENST00000505054 CHST13Q8NET6 341 aa19.57■□□□□ 0.72
SYNE4-207ENST00000505054 MMP19Q99542 508 aa19.57■□□□□ 0.72
SYNE4-207ENST00000505054 EYSQ5T1H1 3165 aa19.56■□□□□ 0.72
SYNE4-207ENST00000505054 ZBTB43O43298 467 aa19.56■□□□□ 0.72
SYNE4-207ENST00000505054 KCTD2Q14681 263 aa19.56■□□□□ 0.72
SYNE4-207ENST00000505054 MUM1L1Q5H9M0 696 aa19.56■□□□□ 0.72
SYNE4-207ENST00000505054 PRAMEF19Q5SWL8 479 aa19.56■□□□□ 0.72
SYNE4-207ENST00000505054 C9orf50Q5SZB4 431 aa19.56■□□□□ 0.72
SYNE4-207ENST00000505054 SYNE3Q6ZMZ3 975 aa19.56■□□□□ 0.72
SYNE4-207ENST00000505054 BADQ92934 168 aa19.56■□□□□ 0.72
SYNE4-207ENST00000505054 TRERF1Q96PN7 1200 aa19.56■□□□□ 0.72
SYNE4-207ENST00000505054 COL25A1Q9BXS0 654 aaPredicted RBP19.56■□□□□ 0.72
SYNE4-207ENST00000505054 ACAD9Q9H845 621 aa19.56■□□□□ 0.72
SYNE4-207ENST00000505054 FBXO40Q9UH90 709 aa19.56■□□□□ 0.72
SYNE4-207ENST00000505054 GOLGA8BA8MQT2 603 aa19.55■□□□□ 0.72
SYNE4-207ENST00000505054 PPP1R11O60927 126 aaPredicted RBP19.55■□□□□ 0.72
SYNE4-207ENST00000505054 RARBP10826 455 aa19.55■□□□□ 0.72
SYNE4-207ENST00000505054 RCAN1P53805 252 aa19.55■□□□□ 0.72
SYNE4-207ENST00000505054 EVCP57679 992 aa19.55■□□□□ 0.72
SYNE4-207ENST00000505054 TMTC3Q6ZXV5 915 aa19.55■□□□□ 0.72
SYNE4-207ENST00000505054 SRBD1Q8N5C6 995 aaKnown RBP19.55■□□□□ 0.72
SYNE4-207ENST00000505054 PIGSQ96S52 555 aa19.55■□□□□ 0.72
SYNE4-207ENST00000505054 SPZ1Q9BXG8 430 aa19.55■□□□□ 0.72
SYNE4-207ENST00000505054 XPNPEP3Q9NQH7 507 aa19.55■□□□□ 0.72
SYNE4-207ENST00000505054 PDRG1Q9NUG6 133 aa19.55■□□□□ 0.72
SYNE4-207ENST00000505054 PHF24Q9UPV7 400 aa19.55■□□□□ 0.72
SYNE4-207ENST00000505054 NID2Q14112 1375 aa19.55■□□□□ 0.72
SYNE4-207ENST00000505054 GOLGA8AA7E2F4 631 aa19.54■□□□□ 0.72
SYNE4-207ENST00000505054 PGK2P07205 417 aa19.54■□□□□ 0.72
SYNE4-207ENST00000505054 GNAQP50148 359 aa19.54■□□□□ 0.72
SYNE4-207ENST00000505054 SMAD3P84022 425 aaKnown RBP19.54■□□□□ 0.72
SYNE4-207ENST00000505054 RTN1Q16799 776 aa19.54■□□□□ 0.72
SYNE4-207ENST00000505054 USH1GQ495M9 461 aa19.54■□□□□ 0.72
SYNE4-207ENST00000505054 HOMER1Q86YM7 354 aa19.54■□□□□ 0.72
SYNE4-207ENST00000505054 CMTR1Q8N1G2 835 aaKnown RBP19.54■□□□□ 0.72
SYNE4-207ENST00000505054 CLEC4DQ8WXI8 215 aa19.54■□□□□ 0.72
SYNE4-207ENST00000505054 FERMT2Q96AC1 680 aa19.54■□□□□ 0.72
SYNE4-207ENST00000505054 LZTS2Q9BRK4 669 aa19.54■□□□□ 0.72
SYNE4-207ENST00000505054 C22orf23Q9BZE7 217 aa19.54■□□□□ 0.72
SYNE4-207ENST00000505054 A1CFQ9NQ94 594 aaKnown RBP19.54■□□□□ 0.72
SYNE4-207ENST00000505054 FAM217BQ9NTX9 383 aaPredicted RBP19.54■□□□□ 0.72
SYNE4-207ENST00000505054 PNMA2Q9UL42 364 aa19.54■□□□□ 0.72
SYNE4-207ENST00000505054 DIS3Q9Y2L1 958 aaKnown RBP19.54■□□□□ 0.72
SYNE4-207ENST00000505054 DNAJC25-GNG10A0A024R161 153 aa19.53■□□□□ 0.72
SYNE4-207ENST00000505054 TRIM43BA6NCK2 446 aa19.53■□□□□ 0.72
SYNE4-207ENST00000505054 NFIBO00712 420 aa19.53■□□□□ 0.72
SYNE4-207ENST00000505054 ZBTB5O15062 677 aa19.53■□□□□ 0.72
SYNE4-207ENST00000505054 SMARCA1P28370 1054 aa19.53■□□□□ 0.72
SYNE4-207ENST00000505054 CDC27P30260 824 aa19.53■□□□□ 0.72
SYNE4-207ENST00000505054 SH3RF1Q7Z6J0 888 aa19.53■□□□□ 0.72
SYNE4-207ENST00000505054 RNF180Q86T96 592 aa19.53■□□□□ 0.72
SYNE4-207ENST00000505054 FBXO11Q86XK2 927 aa19.53■□□□□ 0.72
SYNE4-207ENST00000505054 ANKRD35Q8N283 1001 aa19.53■□□□□ 0.72
SYNE4-207ENST00000505054 TRIM43Q96BQ3 446 aaPredicted RBP19.53■□□□□ 0.72
SYNE4-207ENST00000505054 CDX2Q99626 313 aaPredicted RBP19.53■□□□□ 0.72
SYNE4-207ENST00000505054 KIF2CQ99661 725 aa19.53■□□□□ 0.72
SYNE4-207ENST00000505054 TINF2Q9BSI4 451 aa19.53■□□□□ 0.72
SYNE4-207ENST00000505054 NAP1L2Q9ULW6 460 aaPredicted RBP19.53■□□□□ 0.72
SYNE4-207ENST00000505054 RBM25P49756 843 aaKnown RBP19.52■□□□□ 0.72
SYNE4-207ENST00000505054 TLE2Q04725 743 aa19.52■□□□□ 0.72
SYNE4-207ENST00000505054 FUT2Q10981 343 aa19.52■□□□□ 0.72
SYNE4-207ENST00000505054 ZNF792Q3KQV3 632 aa19.52■□□□□ 0.72
SYNE4-207ENST00000505054 PIBF1Q8WXW3 757 aa19.52■□□□□ 0.72
SYNE4-207ENST00000505054 LARP6Q9BRS8 491 aaKnown RBP19.52■□□□□ 0.72
SYNE4-207ENST00000505054 ALDH8A1Q9H2A2 487 aaPredicted RBP19.52■□□□□ 0.72
SYNE4-207ENST00000505054 RBM28Q9NW13 759 aaKnown RBP19.52■□□□□ 0.72
SYNE4-207ENST00000505054 CDH23Q9H251 3354 aa19.52■□□□□ 0.71
SYNE4-207ENST00000505054 ABCB11O95342 1321 aa19.51■□□□□ 0.71
SYNE4-207ENST00000505054 CNTNAP5Q8WYK1 1306 aa19.51■□□□□ 0.71
SYNE4-207ENST00000505054 CLTBP09497 229 aa19.51■□□□□ 0.71
SYNE4-207ENST00000505054 AKR1A1P14550 325 aa19.51■□□□□ 0.71
SYNE4-207ENST00000505054 PDIA3P30101 505 aaKnown RBP19.51■□□□□ 0.71
SYNE4-207ENST00000505054 METAP2P50579 478 aaKnown RBP eCLIP19.51■□□□□ 0.71
SYNE4-207ENST00000505054 DDX11Q96FC9 970 aa19.51■□□□□ 0.71
SYNE4-207ENST00000505054 FGD4Q96M96 766 aa19.51■□□□□ 0.71
SYNE4-207ENST00000505054 AMNQ9BXJ7 453 aa19.51■□□□□ 0.71
SYNE4-207ENST00000505054 BACH2Q9BYV9 841 aa19.51■□□□□ 0.71
SYNE4-207ENST00000505054 SEMA6BQ9H3T3 888 aa19.51■□□□□ 0.71
SYNE4-207ENST00000505054 CYP39A1Q9NYL5 469 aa19.51■□□□□ 0.71
SYNE4-207ENST00000505054 TMEM265A0A087WTH1 108 aa19.5■□□□□ 0.71
SYNE4-207ENST00000505054 PNMA6FA0A0J9YX94 578 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms