RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 PPP1R18Q6NYC8 613 aa11.38□□□□□ -0.59
NR1I3-220ENST00000505005 Q6ZUG5 572 aa11.38□□□□□ -0.59
NR1I3-220ENST00000505005 TRIM22Q8IYM9 498 aa11.38□□□□□ -0.59
NR1I3-220ENST00000505005 RASEFQ8IZ41 740 aa11.38□□□□□ -0.59
NR1I3-220ENST00000505005 PCSK9Q8NBP7 692 aaKnown RBP11.38□□□□□ -0.59
NR1I3-220ENST00000505005 MORC4Q8TE76 937 aa11.38□□□□□ -0.59
NR1I3-220ENST00000505005 IL17RAQ96F46 866 aa11.38□□□□□ -0.59
NR1I3-220ENST00000505005 NR2E3Q9Y5X4 410 aa11.38□□□□□ -0.59
NR1I3-220ENST00000505005 KLF18A0A0U1RQI7 1052 aa11.37□□□□□ -0.59
NR1I3-220ENST00000505005 GOLGA8AA7E2F4 631 aa11.37□□□□□ -0.59
NR1I3-220ENST00000505005 GOLGA8BA8MQT2 603 aa11.37□□□□□ -0.59
NR1I3-220ENST00000505005 CPLX1O14810 134 aa11.37□□□□□ -0.59
NR1I3-220ENST00000505005 DUSP11O75319 330 aaKnown RBP11.37□□□□□ -0.59
NR1I3-220ENST00000505005 FOSP01100 380 aaPredicted RBP11.37□□□□□ -0.59
NR1I3-220ENST00000505005 PGK2P07205 417 aa11.37□□□□□ -0.59
NR1I3-220ENST00000505005 CYBAP13498 195 aa11.37□□□□□ -0.59
NR1I3-220ENST00000505005 XBP1P17861 261 aa11.37□□□□□ -0.59
NR1I3-220ENST00000505005 SOX10P56693 466 aa11.37□□□□□ -0.59
NR1I3-220ENST00000505005 RPS6P62753 249 aaKnown RBP11.37□□□□□ -0.59
NR1I3-220ENST00000505005 PDE4DQ08499 809 aa11.37□□□□□ -0.59
NR1I3-220ENST00000505005 ACVR2BQ13705 512 aa11.37□□□□□ -0.59
NR1I3-220ENST00000505005 BAATQ14032 418 aaPredicted RBP11.37□□□□□ -0.59
NR1I3-220ENST00000505005 MTFR1Q15390 333 aa11.37□□□□□ -0.59
NR1I3-220ENST00000505005 STXBP2Q15833 593 aa11.37□□□□□ -0.59
NR1I3-220ENST00000505005 ADCK5Q3MIX3 580 aa11.37□□□□□ -0.59
NR1I3-220ENST00000505005 USH1GQ495M9 461 aa11.37□□□□□ -0.59
NR1I3-220ENST00000505005 SKAP1Q86WV1 359 aa11.37□□□□□ -0.59
NR1I3-220ENST00000505005 MICU3Q86XE3 530 aa11.37□□□□□ -0.59
NR1I3-220ENST00000505005 STAG2Q8N3U4 1231 aa11.37□□□□□ -0.59
NR1I3-220ENST00000505005 BICD2Q8TD16 824 aa11.37□□□□□ -0.59
NR1I3-220ENST00000505005 TSEN34Q9BSV6 310 aaKnown RBP11.37□□□□□ -0.59
NR1I3-220ENST00000505005 PDRG1Q9NUG6 133 aa11.37□□□□□ -0.59
NR1I3-220ENST00000505005 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.37□□□□□ -0.59
NR1I3-220ENST00000505005 DNM1LO00429 736 aa11.36□□□□□ -0.59
NR1I3-220ENST00000505005 KPNA6O60684 536 aa11.36□□□□□ -0.59
NR1I3-220ENST00000505005 CABYRO75952 493 aa11.36□□□□□ -0.59
NR1I3-220ENST00000505005 FARP2O94887 1054 aaPredicted RBP11.36□□□□□ -0.59
NR1I3-220ENST00000505005 TGFB3P10600 412 aa11.36□□□□□ -0.59
NR1I3-220ENST00000505005 GNA11P29992 359 aa11.36□□□□□ -0.59
NR1I3-220ENST00000505005 CYP2C19P33261 490 aa11.36□□□□□ -0.59
NR1I3-220ENST00000505005 ALDH5A1P51649 535 aaPredicted RBP11.36□□□□□ -0.59
NR1I3-220ENST00000505005 CCL14Q16627 93 aa11.36□□□□□ -0.59
NR1I3-220ENST00000505005 GNPTABQ3T906 1256 aa11.36□□□□□ -0.59
NR1I3-220ENST00000505005 ARHGEF16Q5VV41 709 aa11.36□□□□□ -0.59
NR1I3-220ENST00000505005 TMTC3Q6ZXV5 915 aa11.36□□□□□ -0.59
NR1I3-220ENST00000505005 ARMCX2Q7L311 632 aa11.36□□□□□ -0.59
NR1I3-220ENST00000505005 HOMER1Q86YM7 354 aa11.36□□□□□ -0.59
NR1I3-220ENST00000505005 CCDC148Q8NFR7 591 aa11.36□□□□□ -0.59
NR1I3-220ENST00000505005 BRF1Q92994 677 aa11.36□□□□□ -0.59
NR1I3-220ENST00000505005 PIGSQ96S52 555 aa11.36□□□□□ -0.59
NR1I3-220ENST00000505005 RNF26Q9BY78 433 aaPredicted RBP11.36□□□□□ -0.59
NR1I3-220ENST00000505005 C22orf23Q9BZE7 217 aa11.36□□□□□ -0.59
NR1I3-220ENST00000505005 AP5M1Q9H0R1 490 aa11.36□□□□□ -0.59
NR1I3-220ENST00000505005 NAP1L2Q9ULW6 460 aaPredicted RBP11.36□□□□□ -0.59
NR1I3-220ENST00000505005 ZSWIM8A7E2V4 1837 aa11.35□□□□□ -0.59
NR1I3-220ENST00000505005 MOXD2PA6NHM9 499 aa11.35□□□□□ -0.59
NR1I3-220ENST00000505005 PIK3CDO00329 1044 aa11.35□□□□□ -0.59
NR1I3-220ENST00000505005 MAFGO15525 162 aa11.35□□□□□ -0.59
NR1I3-220ENST00000505005 PEX10O60683 326 aa11.35□□□□□ -0.59
NR1I3-220ENST00000505005 EIF3JO75822 258 aaKnown RBP11.35□□□□□ -0.59
NR1I3-220ENST00000505005 CFBP00751 764 aa11.35□□□□□ -0.59
NR1I3-220ENST00000505005 CALML3P27482 149 aa11.35□□□□□ -0.59
NR1I3-220ENST00000505005 HSD17B4P51659 736 aa11.35□□□□□ -0.59
NR1I3-220ENST00000505005 TTLL4Q14679 1199 aa11.35□□□□□ -0.59
NR1I3-220ENST00000505005 MUM1L1Q5H9M0 696 aa11.35□□□□□ -0.59
NR1I3-220ENST00000505005 CCDC144CPQ8IYA2 1237 aa11.35□□□□□ -0.59
NR1I3-220ENST00000505005 SMARCC2Q8TAQ2 1214 aa11.35□□□□□ -0.59
NR1I3-220ENST00000505005 SCFD2Q8WU76 684 aa11.35□□□□□ -0.59
NR1I3-220ENST00000505005 CLEC4DQ8WXI8 215 aa11.35□□□□□ -0.59
NR1I3-220ENST00000505005 WASF1Q92558 559 aa11.35□□□□□ -0.59
NR1I3-220ENST00000505005 CDHR1Q96JP9 859 aa11.35□□□□□ -0.59
NR1I3-220ENST00000505005 RMDN3Q96TC7 470 aa11.35□□□□□ -0.59
NR1I3-220ENST00000505005 NID2Q14112 1375 aa11.35□□□□□ -0.59
NR1I3-220ENST00000505005 SPDYE3A6NKU9 549 aa11.34□□□□□ -0.59
NR1I3-220ENST00000505005 PRPF3O43395 683 aaKnown RBP11.34□□□□□ -0.59
NR1I3-220ENST00000505005 EN2P19622 333 aaPredicted RBP11.34□□□□□ -0.59
NR1I3-220ENST00000505005 CACNB1Q02641 598 aaPredicted RBP11.34□□□□□ -0.59
NR1I3-220ENST00000505005 TNFAIP2Q03169 654 aa11.34□□□□□ -0.59
NR1I3-220ENST00000505005 GALNT17Q6IS24 598 aa11.34□□□□□ -0.59
NR1I3-220ENST00000505005 GIMAP8Q8ND71 665 aaPredicted RBP11.34□□□□□ -0.59
NR1I3-220ENST00000505005 C11orf49Q9H6J7 331 aa11.34□□□□□ -0.59
NR1I3-220ENST00000505005 PSTPIP2Q9H939 334 aa11.34□□□□□ -0.59
NR1I3-220ENST00000505005 XPNPEP3Q9NQH7 507 aa11.34□□□□□ -0.59
NR1I3-220ENST00000505005 SH3GLB2Q9NR46 395 aa11.34□□□□□ -0.59
NR1I3-220ENST00000505005 FLRT1Q9NZU1 646 aa11.34□□□□□ -0.59
NR1I3-220ENST00000505005 ZHX1Q9UKY1 873 aaPredicted RBP11.34□□□□□ -0.59
NR1I3-220ENST00000505005 TAF6LQ9Y6J9 622 aa11.34□□□□□ -0.59
NR1I3-220ENST00000505005 MROH7Q68CQ1 1323 aa11.34□□□□□ -0.59
NR1I3-220ENST00000505005 POTEFA5A3E0 1075 aa11.33□□□□□ -0.6
NR1I3-220ENST00000505005 NFIBO00712 420 aa11.33□□□□□ -0.6
NR1I3-220ENST00000505005 CYTH3O43739 400 aa11.33□□□□□ -0.6
NR1I3-220ENST00000505005 ST18O60284 1047 aa11.33□□□□□ -0.6
NR1I3-220ENST00000505005 SNAI1O95863 264 aaPredicted RBP11.33□□□□□ -0.6
NR1I3-220ENST00000505005 MYCP01106 439 aaPredicted RBP11.33□□□□□ -0.6
NR1I3-220ENST00000505005 ZNF865P0CJ78 1059 aaPredicted RBP11.33□□□□□ -0.6
NR1I3-220ENST00000505005 IFNAR1P17181 557 aa11.33□□□□□ -0.6
NR1I3-220ENST00000505005 EDNRBP24530 442 aa11.33□□□□□ -0.6
NR1I3-220ENST00000505005 CST5P28325 142 aaPredicted RBP11.33□□□□□ -0.6
NR1I3-220ENST00000505005 CCND2P30279 289 aa11.33□□□□□ -0.6
NR1I3-220ENST00000505005 CCND3P30281 292 aaPredicted RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms