RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 NFIAQ12857 509 aa15.64■□□□□ 0.09
TCOF1-207ENST00000504761 MRFAP1L1Q96HT8 127 aa15.64■□□□□ 0.09
TCOF1-207ENST00000504761 DYNC1I1O14576 645 aa15.63■□□□□ 0.09
TCOF1-207ENST00000504761 SRGNP10124 158 aa15.63■□□□□ 0.09
TCOF1-207ENST00000504761 SBK1Q52WX2 424 aa15.63■□□□□ 0.09
TCOF1-207ENST00000504761 RESP18Q5W5W9 173 aa15.63■□□□□ 0.09
TCOF1-207ENST00000504761 CYP26C1Q6V0L0 522 aa15.63■□□□□ 0.09
TCOF1-207ENST00000504761 ZNRF3Q9ULT6 936 aa15.63■□□□□ 0.09
TCOF1-207ENST00000504761 GDAQ9Y2T3 454 aa15.63■□□□□ 0.09
TCOF1-207ENST00000504761 RHOXF2BP0C7M4 288 aa15.63■□□□□ 0.09
TCOF1-207ENST00000504761 KRT5P13647 590 aa15.63■□□□□ 0.09
TCOF1-207ENST00000504761 TYW1BQ6NUM6 668 aa15.63■□□□□ 0.09
TCOF1-207ENST00000504761 TMED8Q6PL24 325 aaPredicted RBP15.63■□□□□ 0.09
TCOF1-207ENST00000504761 SHC4Q6S5L8 630 aa15.63■□□□□ 0.09
TCOF1-207ENST00000504761 TSC1Q92574 1164 aa15.63■□□□□ 0.09
TCOF1-207ENST00000504761 RHOXF2Q9BQY4 288 aa15.63■□□□□ 0.09
TCOF1-207ENST00000504761 MYO3BQ8WXR4 1341 aa15.63■□□□□ 0.09
TCOF1-207ENST00000504761 CTNNA2P26232 953 aa15.63■□□□□ 0.09
TCOF1-207ENST00000504761 CLEC17AQ6ZS10 378 aa15.63■□□□□ 0.09
TCOF1-207ENST00000504761 AK8Q96MA6 479 aa15.63■□□□□ 0.09
TCOF1-207ENST00000504761 BARHL2Q9NY43 387 aa15.63■□□□□ 0.09
TCOF1-207ENST00000504761 RGPD8O14715 1765 aaPredicted RBP15.63■□□□□ 0.09
TCOF1-207ENST00000504761 DDR1Q08345 913 aa15.62■□□□□ 0.09
TCOF1-207ENST00000504761 STRN3Q13033 797 aa15.62■□□□□ 0.09
TCOF1-207ENST00000504761 ARHGAP44Q17R89 818 aa15.62■□□□□ 0.09
TCOF1-207ENST00000504761 ODR4Q5SWX8 454 aa15.62■□□□□ 0.09
TCOF1-207ENST00000504761 LRP10Q7Z4F1 713 aa15.62■□□□□ 0.09
TCOF1-207ENST00000504761 GPR75-ASB3A0A0A6YYF3 556 aa15.62■□□□□ 0.09
TCOF1-207ENST00000504761 ADAM9Q13443 819 aa15.62■□□□□ 0.09
TCOF1-207ENST00000504761 RASA3Q14644 834 aa15.62■□□□□ 0.09
TCOF1-207ENST00000504761 MCTP2Q6DN12 878 aa15.62■□□□□ 0.09
TCOF1-207ENST00000504761 LRRC8AQ8IWT6 810 aa15.62■□□□□ 0.09
TCOF1-207ENST00000504761 CGNQ9P2M7 1197 aaKnown RBP15.62■□□□□ 0.09
TCOF1-207ENST00000504761 NFAT5O94916 1531 aa15.62■□□□□ 0.09
TCOF1-207ENST00000504761 PSMD14O00487 310 aa15.62■□□□□ 0.09
TCOF1-207ENST00000504761 GCFC2P16383 781 aaKnown RBP15.62■□□□□ 0.09
TCOF1-207ENST00000504761 CUL4BQ13620 913 aa15.62■□□□□ 0.09
TCOF1-207ENST00000504761 CACTINQ8WUQ7 758 aaKnown RBP15.62■□□□□ 0.09
TCOF1-207ENST00000504761 GSTTP1A0A1W2PQM5 241 aa15.62■□□□□ 0.09
TCOF1-207ENST00000504761 SMIM22K7EJ46 135 aa15.62■□□□□ 0.09
TCOF1-207ENST00000504761 RIOK3O14730 519 aaKnown RBP15.62■□□□□ 0.09
TCOF1-207ENST00000504761 TDP2O95551 362 aa15.62■□□□□ 0.09
TCOF1-207ENST00000504761 NEFHP12036 1026 aa15.62■□□□□ 0.09
TCOF1-207ENST00000504761 IFI16Q16666 785 aaKnown RBP15.62■□□□□ 0.09
TCOF1-207ENST00000504761 USP49Q70CQ1 688 aa15.62■□□□□ 0.09
TCOF1-207ENST00000504761 RAVER2Q9HCJ3 691 aaKnown RBP15.62■□□□□ 0.09
TCOF1-207ENST00000504761 DISC1Q9NRI5 854 aa15.62■□□□□ 0.09
TCOF1-207ENST00000504761 DKC1O60832 514 aaKnown RBP eCLIP15.61■□□□□ 0.09
TCOF1-207ENST00000504761 RCAN1P53805 252 aa15.61■□□□□ 0.09
TCOF1-207ENST00000504761 RCSD1Q6JBY9 416 aa15.61■□□□□ 0.09
TCOF1-207ENST00000504761 METTL13Q8N6R0 699 aa15.61■□□□□ 0.09
TCOF1-207ENST00000504761 RNF181Q9P0P0 153 aa15.61■□□□□ 0.09
TCOF1-207ENST00000504761 LARSQ9P2J5 1176 aaKnown RBP15.61■□□□□ 0.09
TCOF1-207ENST00000504761 ARMCX3Q9UH62 379 aaPredicted RBP15.61■□□□□ 0.09
TCOF1-207ENST00000504761 K7ENM7 598 aa15.61■□□□□ 0.09
TCOF1-207ENST00000504761 MAGEA1P43355 309 aa15.61■□□□□ 0.09
TCOF1-207ENST00000504761 TRIM14Q14142 442 aa15.61■□□□□ 0.09
TCOF1-207ENST00000504761 SEPT14Q6ZU15 432 aa15.61■□□□□ 0.09
TCOF1-207ENST00000504761 TMTC1Q8IUR5 882 aa15.61■□□□□ 0.09
TCOF1-207ENST00000504761 VGLL2Q8N8G2 317 aa15.61■□□□□ 0.09
TCOF1-207ENST00000504761 CCDC127Q96BQ5 260 aa15.61■□□□□ 0.09
TCOF1-207ENST00000504761 SUGT1Q9Y2Z0 365 aa15.61■□□□□ 0.09
TCOF1-207ENST00000504761 COL4A3BPQ9Y5P4 624 aa15.61■□□□□ 0.09
TCOF1-207ENST00000504761 hCG_1984214I3L0E3 225 aa15.61■□□□□ 0.09
TCOF1-207ENST00000504761 USP14P54578 494 aa15.61■□□□□ 0.09
TCOF1-207ENST00000504761 COL9A3Q14050 684 aaPredicted RBP15.61■□□□□ 0.09
TCOF1-207ENST00000504761 UTP14CQ5TAP6 766 aaKnown RBP15.61■□□□□ 0.09
TCOF1-207ENST00000504761 POTEDQ86YR6 584 aa15.61■□□□□ 0.09
TCOF1-207ENST00000504761 ZNF713Q8N859 430 aaPredicted RBP15.61■□□□□ 0.09
TCOF1-207ENST00000504761 CCDC113Q9H0I3 377 aa15.61■□□□□ 0.09
TCOF1-207ENST00000504761 BCL2L12Q9HB09 334 aa15.61■□□□□ 0.09
TCOF1-207ENST00000504761 PCDHA6Q9UN73 950 aa15.61■□□□□ 0.09
TCOF1-207ENST00000504761 PCDHA8Q9Y5H6 950 aa15.61■□□□□ 0.09
TCOF1-207ENST00000504761 STK24Q9Y6E0 443 aa15.61■□□□□ 0.09
TCOF1-207ENST00000504761 MON2Q7Z3U7 1717 aa15.61■□□□□ 0.09
TCOF1-207ENST00000504761 SFI1A8K8P3 1242 aa15.6■□□□□ 0.09
TCOF1-207ENST00000504761 XRCC5P13010 732 aaKnown RBP15.6■□□□□ 0.09
TCOF1-207ENST00000504761 CTTNQ14247 550 aaKnown RBP15.6■□□□□ 0.09
TCOF1-207ENST00000504761 MAP9Q49MG5 647 aa15.6■□□□□ 0.09
TCOF1-207ENST00000504761 ARL6IP4Q66PJ3 421 aaKnown RBP15.6■□□□□ 0.09
TCOF1-207ENST00000504761 TUBGCP2Q9BSJ2 902 aa15.6■□□□□ 0.09
TCOF1-207ENST00000504761 NAA15Q9BXJ9 866 aaKnown RBP15.6■□□□□ 0.09
TCOF1-207ENST00000504761 SH3GLB2Q9NR46 395 aa15.6■□□□□ 0.09
TCOF1-207ENST00000504761 PRR29P0C7W0 189 aa15.6■□□□□ 0.09
TCOF1-207ENST00000504761 COPB1P53618 953 aaKnown RBP15.6■□□□□ 0.09
TCOF1-207ENST00000504761 NCBP1Q09161 790 aaKnown RBP15.6■□□□□ 0.09
TCOF1-207ENST00000504761 KLHL30Q0D2K2 578 aa15.6■□□□□ 0.09
TCOF1-207ENST00000504761 ARID5BQ14865 1188 aa15.6■□□□□ 0.09
TCOF1-207ENST00000504761 OR8K1Q8NGG5 319 aa15.6■□□□□ 0.09
TCOF1-207ENST00000504761 KCNB2Q92953 911 aa15.6■□□□□ 0.09
TCOF1-207ENST00000504761 BHMT2Q9H2M3 363 aa15.6■□□□□ 0.09
TCOF1-207ENST00000504761 PRDM10Q9NQV6 1147 aa15.6■□□□□ 0.09
TCOF1-207ENST00000504761 FMN2Q9NZ56 1722 aa15.6■□□□□ 0.09
TCOF1-207ENST00000504761 ERCC5P28715 1186 aaPredicted RBP15.6■□□□□ 0.09
TCOF1-207ENST00000504761 TROAPQ12815 778 aa15.6■□□□□ 0.09
TCOF1-207ENST00000504761 KRT26Q7Z3Y9 468 aa15.6■□□□□ 0.09
TCOF1-207ENST00000504761 MICALL2Q8IY33 904 aa15.6■□□□□ 0.09
TCOF1-207ENST00000504761 PIGOQ8TEQ8 1089 aa15.6■□□□□ 0.09
TCOF1-207ENST00000504761 CNOT6LQ96LI5 555 aaKnown RBP15.6■□□□□ 0.09
TCOF1-207ENST00000504761 CASP14P31944 242 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms