RNA–Protein interactions for RNA: ENST00000504554.1

RFC1-207, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-207ENST00000504554 TRMT44Q8IYL2 757 aaKnown RBP9.42□□□□□ -0.9
RFC1-207ENST00000504554 ENAHQ8N8S7 591 aaPredicted RBP9.42□□□□□ -0.9
RFC1-207ENST00000504554 DCAF4Q8WV16 495 aa9.42□□□□□ -0.9
RFC1-207ENST00000504554 ANKS1AQ92625 1134 aa9.42□□□□□ -0.9
RFC1-207ENST00000504554 ESR2Q92731 530 aa9.42□□□□□ -0.9
RFC1-207ENST00000504554 LSG1Q9H089 658 aaKnown RBP9.42□□□□□ -0.9
RFC1-207ENST00000504554 CPVLQ9H3G5 476 aa9.42□□□□□ -0.9
RFC1-207ENST00000504554 RNF41Q9H4P4 317 aaPredicted RBP9.42□□□□□ -0.9
RFC1-207ENST00000504554 SENP2Q9HC62 589 aa9.42□□□□□ -0.9
RFC1-207ENST00000504554 OGDHLQ9ULD0 1010 aa9.42□□□□□ -0.9
RFC1-207ENST00000504554 ISY1Q9ULR0 285 aaKnown RBP9.42□□□□□ -0.9
RFC1-207ENST00000504554 ADGRG1Q9Y653 693 aa9.42□□□□□ -0.9
RFC1-207ENST00000504554 DDX49Q9Y6V7 483 aaKnown RBP9.42□□□□□ -0.9
RFC1-207ENST00000504554 COL11A1P12107 1806 aaPredicted RBP9.42□□□□□ -0.9
RFC1-207ENST00000504554 MYH4Q9Y623 1939 aa9.41□□□□□ -0.9
RFC1-207ENST00000504554 ZNF236Q9UL36 1845 aa9.41□□□□□ -0.9
RFC1-207ENST00000504554 DNAJC25-GNG10A0A024R161 153 aa9.41□□□□□ -0.9
RFC1-207ENST00000504554 GOLGA8HP0CJ92 632 aa9.41□□□□□ -0.9
RFC1-207ENST00000504554 CCDC96Q2M329 555 aa9.41□□□□□ -0.9
RFC1-207ENST00000504554 MUM1L1Q5H9M0 696 aa9.41□□□□□ -0.9
RFC1-207ENST00000504554 MFSD14CQ5VZR4 134 aa9.41□□□□□ -0.9
RFC1-207ENST00000504554 ANO1Q5XXA6 986 aa9.41□□□□□ -0.9
RFC1-207ENST00000504554 BTNL9Q6UXG8 535 aa9.41□□□□□ -0.9
RFC1-207ENST00000504554 FAM160B2Q86V87 743 aa9.41□□□□□ -0.9
RFC1-207ENST00000504554 DGKHQ86XP1 1220 aa9.41□□□□□ -0.9
RFC1-207ENST00000504554 CHURC1Q8WUH1 139 aa9.41□□□□□ -0.9
RFC1-207ENST00000504554 MAP4K1Q92918 833 aa9.41□□□□□ -0.9
RFC1-207ENST00000504554 PAWRQ96IZ0 340 aaKnown RBP9.41□□□□□ -0.9
RFC1-207ENST00000504554 TTC14Q96N46 770 aa9.41□□□□□ -0.9
RFC1-207ENST00000504554 ZSCAN10Q96SZ4 725 aaPredicted RBP9.41□□□□□ -0.9
RFC1-207ENST00000504554 ESYT1Q9BSJ8 1104 aa9.41□□□□□ -0.9
RFC1-207ENST00000504554 RANBP17Q9H2T7 1088 aaKnown RBP9.41□□□□□ -0.9
RFC1-207ENST00000504554 HOMER2Q9NSB8 354 aa9.41□□□□□ -0.9
RFC1-207ENST00000504554 CTNNA3Q9UI47 895 aa9.41□□□□□ -0.9
RFC1-207ENST00000504554 LAMA4Q16363 1823 aa9.4□□□□□ -0.9
RFC1-207ENST00000504554 ASTN1O14525 1302 aa9.4□□□□□ -0.9
RFC1-207ENST00000504554 PFASO15067 1338 aa9.4□□□□□ -0.9
RFC1-207ENST00000504554 TNKSO95271 1327 aa9.4□□□□□ -0.9
RFC1-207ENST00000504554 E7EWF7 191 aa9.4□□□□□ -0.9
RFC1-207ENST00000504554 OAZ1P54368 228 aa9.4□□□□□ -0.9
RFC1-207ENST00000504554 ANTXR2P58335 489 aa9.4□□□□□ -0.9
RFC1-207ENST00000504554 CNTN2Q02246 1040 aa9.4□□□□□ -0.9
RFC1-207ENST00000504554 ZNF543Q08ER8 600 aa9.4□□□□□ -0.9
RFC1-207ENST00000504554 IKQ13123 557 aaPredicted RBP9.4□□□□□ -0.9
RFC1-207ENST00000504554 KCTD2Q14681 263 aa9.4□□□□□ -0.9
RFC1-207ENST00000504554 SEC23AQ15436 765 aa9.4□□□□□ -0.9
RFC1-207ENST00000504554 SLC35G1Q2M3R5 365 aa9.4□□□□□ -0.9
RFC1-207ENST00000504554 BMP2KLQ5H9B9 411 aa9.4□□□□□ -0.9
RFC1-207ENST00000504554 SYDE2Q5VT97 1194 aa9.4□□□□□ -0.9
RFC1-207ENST00000504554 PRPF38BQ5VTL8 546 aaKnown RBP9.4□□□□□ -0.9
RFC1-207ENST00000504554 PPP1R18Q6NYC8 613 aa9.4□□□□□ -0.9
RFC1-207ENST00000504554 CHST3Q7LGC8 479 aa9.4□□□□□ -0.9
RFC1-207ENST00000504554 RUFY2Q8WXA3 655 aa9.4□□□□□ -0.9
RFC1-207ENST00000504554 PURBQ96QR8 312 aaKnown RBP9.4□□□□□ -0.9
RFC1-207ENST00000504554 UBA5Q9GZZ9 404 aa9.4□□□□□ -0.9
RFC1-207ENST00000504554 DDX20Q9UHI6 824 aaKnown RBP9.4□□□□□ -0.9
RFC1-207ENST00000504554 RBM8AQ9Y5S9 174 aaKnown RBP9.4□□□□□ -0.9
RFC1-207ENST00000504554 SNAI1O95863 264 aaPredicted RBP9.39□□□□□ -0.91
RFC1-207ENST00000504554 ZNF865P0CJ78 1059 aaPredicted RBP9.39□□□□□ -0.91
RFC1-207ENST00000504554 COL6A1P12109 1028 aa9.39□□□□□ -0.91
RFC1-207ENST00000504554 CNGA1P29973 690 aa9.39□□□□□ -0.91
RFC1-207ENST00000504554 SSTR3P32745 418 aaPredicted RBP9.39□□□□□ -0.91
RFC1-207ENST00000504554 COPB2P35606 906 aa9.39□□□□□ -0.91
RFC1-207ENST00000504554 MDM2Q00987 491 aaPredicted RBP9.39□□□□□ -0.91
RFC1-207ENST00000504554 PNMA1Q8ND90 353 aa9.39□□□□□ -0.91
RFC1-207ENST00000504554 CHST13Q8NET6 341 aa9.39□□□□□ -0.91
RFC1-207ENST00000504554 LENG1Q96BZ8 264 aaPredicted RBP9.39□□□□□ -0.91
RFC1-207ENST00000504554 CCDC136Q96JN2 1154 aa9.39□□□□□ -0.91
RFC1-207ENST00000504554 TRERF1Q96PN7 1200 aa9.39□□□□□ -0.91
RFC1-207ENST00000504554 TINF2Q9BSI4 451 aa9.39□□□□□ -0.91
RFC1-207ENST00000504554 KRT23Q9C075 422 aa9.39□□□□□ -0.91
RFC1-207ENST00000504554 A1CFQ9NQ94 594 aaKnown RBP9.39□□□□□ -0.91
RFC1-207ENST00000504554 RNF146Q9NTX7 359 aa9.39□□□□□ -0.91
RFC1-207ENST00000504554 CTDP1Q9Y5B0 961 aaPredicted RBP9.39□□□□□ -0.91
RFC1-207ENST00000504554 H0YGN5 161 aa9.38□□□□□ -0.91
RFC1-207ENST00000504554 NFIBO00712 420 aa9.38□□□□□ -0.91
RFC1-207ENST00000504554 SLC27A2O14975 620 aa9.38□□□□□ -0.91
RFC1-207ENST00000504554 SEPT4O43236 478 aa9.38□□□□□ -0.91
RFC1-207ENST00000504554 ADCY6O43306 1168 aa9.38□□□□□ -0.91
RFC1-207ENST00000504554 ICAM1P05362 532 aa9.38□□□□□ -0.91
RFC1-207ENST00000504554 ALAS1P13196 640 aa9.38□□□□□ -0.91
RFC1-207ENST00000504554 PTGS1P23219 599 aa9.38□□□□□ -0.91
RFC1-207ENST00000504554 IQCA1Q86XH1 822 aa9.38□□□□□ -0.91
RFC1-207ENST00000504554 MB21D2Q8IYB1 491 aaPredicted RBP9.38□□□□□ -0.91
RFC1-207ENST00000504554 ANKRD35Q8N283 1001 aa9.38□□□□□ -0.91
RFC1-207ENST00000504554 STAG2Q8N3U4 1231 aa9.38□□□□□ -0.91
RFC1-207ENST00000504554 FAM133AQ8N9E0 248 aa9.38□□□□□ -0.91
RFC1-207ENST00000504554 ANKLE1Q8NAG6 615 aa9.38□□□□□ -0.91
RFC1-207ENST00000504554 CLEC4DQ8WXI8 215 aa9.38□□□□□ -0.91
RFC1-207ENST00000504554 DDX11Q96FC9 970 aa9.38□□□□□ -0.91
RFC1-207ENST00000504554 PRKD2Q9BZL6 878 aa9.38□□□□□ -0.91
RFC1-207ENST00000504554 KATNBL1Q9H079 304 aa9.38□□□□□ -0.91
RFC1-207ENST00000504554 KAT14Q9H8E8 782 aa9.38□□□□□ -0.91
RFC1-207ENST00000504554 CCPG1Q9ULG6 757 aa9.38□□□□□ -0.91
RFC1-207ENST00000504554 DIS3Q9Y2L1 958 aaKnown RBP9.38□□□□□ -0.91
RFC1-207ENST00000504554 LCE2BO14633 110 aa9.37□□□□□ -0.91
RFC1-207ENST00000504554 FDX1P10109 184 aa9.37□□□□□ -0.91
RFC1-207ENST00000504554 NECTIN1Q15223 517 aa9.37□□□□□ -0.91
RFC1-207ENST00000504554 TKFCQ3LXA3 575 aa9.37□□□□□ -0.91
RFC1-207ENST00000504554 GJC2Q5T442 439 aaPredicted RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms