RNA–Protein interactions for RNA: ENST00000504227.5

CYSTM1-202, Transcript of cysteine rich transmembrane module containing 1, humanhuman

TSL 5

Gene CYSTM1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-202ENST00000504227 MEIS2O14770 477 aa15.85■□□□□ 0.13
CYSTM1-202ENST00000504227 F13A1P00488 732 aa15.85■□□□□ 0.13
CYSTM1-202ENST00000504227 FOSP01100 380 aaPredicted RBP15.85■□□□□ 0.13
CYSTM1-202ENST00000504227 U2AF2P26368 475 aaKnown RBP eCLIP15.85■□□□□ 0.13
CYSTM1-202ENST00000504227 MAPK4P31152 587 aa15.85■□□□□ 0.13
CYSTM1-202ENST00000504227 HOXA13P31271 388 aaPredicted RBP15.85■□□□□ 0.13
CYSTM1-202ENST00000504227 MAP2K1Q02750 393 aaPredicted RBP15.85■□□□□ 0.13
CYSTM1-202ENST00000504227 NR5A1Q13285 461 aa15.85■□□□□ 0.13
CYSTM1-202ENST00000504227 UBE2SQ16763 222 aa15.85■□□□□ 0.13
CYSTM1-202ENST00000504227 JAKMIP3Q5VZ66 844 aa15.85■□□□□ 0.13
CYSTM1-202ENST00000504227 RNF207Q6ZRF8 634 aa15.85■□□□□ 0.13
CYSTM1-202ENST00000504227 KRT25Q7Z3Z0 450 aa15.85■□□□□ 0.13
CYSTM1-202ENST00000504227 FERMT3Q86UX7 667 aa15.85■□□□□ 0.13
CYSTM1-202ENST00000504227 NOSTRINQ8IVI9 506 aa15.85■□□□□ 0.13
CYSTM1-202ENST00000504227 ANKRD35Q8N283 1001 aa15.85■□□□□ 0.13
CYSTM1-202ENST00000504227 PORCNQ9H237 461 aa15.85■□□□□ 0.13
CYSTM1-202ENST00000504227 PCDHA6Q9UN73 950 aa15.85■□□□□ 0.13
CYSTM1-202ENST00000504227 ZDHHC9Q9Y397 364 aa15.85■□□□□ 0.13
CYSTM1-202ENST00000504227 PCDHA8Q9Y5H6 950 aa15.85■□□□□ 0.13
CYSTM1-202ENST00000504227 A0A0G2JMZ2 1700 aa15.85■□□□□ 0.13
CYSTM1-202ENST00000504227 SPDYE3A6NKU9 549 aa15.84■□□□□ 0.13
CYSTM1-202ENST00000504227 TBC1D8O95759 1140 aa15.84■□□□□ 0.13
CYSTM1-202ENST00000504227 FCER1AP12319 257 aa15.84■□□□□ 0.13
CYSTM1-202ENST00000504227 HSD17B4P51659 736 aa15.84■□□□□ 0.13
CYSTM1-202ENST00000504227 GHRHRQ02643 423 aa15.84■□□□□ 0.13
CYSTM1-202ENST00000504227 AP3B2Q13367 1082 aa15.84■□□□□ 0.13
CYSTM1-202ENST00000504227 BAATQ14032 418 aaPredicted RBP15.84■□□□□ 0.13
CYSTM1-202ENST00000504227 KCTD2Q14681 263 aa15.84■□□□□ 0.13
CYSTM1-202ENST00000504227 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.84■□□□□ 0.13
CYSTM1-202ENST00000504227 BRAPQ7Z569 592 aa15.84■□□□□ 0.13
CYSTM1-202ENST00000504227 FCHSD1Q86WN1 690 aa15.84■□□□□ 0.13
CYSTM1-202ENST00000504227 RASGRP4Q8TDF6 673 aa15.84■□□□□ 0.13
CYSTM1-202ENST00000504227 BEGAINQ9BUH8 593 aa15.84■□□□□ 0.13
CYSTM1-202ENST00000504227 CFHR5Q9BXR6 569 aa15.84■□□□□ 0.13
CYSTM1-202ENST00000504227 EFCC1Q9HA90 598 aa15.84■□□□□ 0.13
CYSTM1-202ENST00000504227 A1CFQ9NQ94 594 aaKnown RBP15.84■□□□□ 0.13
CYSTM1-202ENST00000504227 IVNS1ABPQ9Y6Y0 642 aa15.84■□□□□ 0.13
CYSTM1-202ENST00000504227 PFASO15067 1338 aa15.84■□□□□ 0.13
CYSTM1-202ENST00000504227 KIF28PB7ZC32 967 aa15.83■□□□□ 0.12
CYSTM1-202ENST00000504227 M0R2N6 131 aa15.83■□□□□ 0.12
CYSTM1-202ENST00000504227 ADAMTS3O15072 1205 aa15.83■□□□□ 0.12
CYSTM1-202ENST00000504227 STRNO43815 780 aa15.83■□□□□ 0.12
CYSTM1-202ENST00000504227 CLK2P49760 499 aaKnown RBP15.83■□□□□ 0.12
CYSTM1-202ENST00000504227 RPS6P62753 249 aaKnown RBP15.83■□□□□ 0.12
CYSTM1-202ENST00000504227 RESTQ13127 1097 aa15.83■□□□□ 0.12
CYSTM1-202ENST00000504227 NONOQ15233 471 aaKnown RBP eCLIP15.83■□□□□ 0.12
CYSTM1-202ENST00000504227 PLEKHH3Q7Z736 793 aa15.83■□□□□ 0.12
CYSTM1-202ENST00000504227 SYTL5Q8TDW5 730 aaPredicted RBP15.83■□□□□ 0.12
CYSTM1-202ENST00000504227 TNFRSF25Q93038 417 aa15.83■□□□□ 0.12
CYSTM1-202ENST00000504227 MMP19Q99542 508 aa15.83■□□□□ 0.12
CYSTM1-202ENST00000504227 R3HDMLQ9H3Y0 253 aa15.83■□□□□ 0.12
CYSTM1-202ENST00000504227 EHMT1Q9H9B1 1298 aa15.83■□□□□ 0.12
CYSTM1-202ENST00000504227 TMEM260Q9NX78 707 aa15.83■□□□□ 0.12
CYSTM1-202ENST00000504227 SAGE1Q9NXZ1 904 aa15.83■□□□□ 0.12
CYSTM1-202ENST00000504227 CYP39A1Q9NYL5 469 aa15.83■□□□□ 0.12
CYSTM1-202ENST00000504227 ATP6V1DQ9Y5K8 247 aa15.83■□□□□ 0.12
CYSTM1-202ENST00000504227 POTEB2H3BUK9 544 aa15.82■□□□□ 0.12
CYSTM1-202ENST00000504227 SLC30A10Q6XR72 485 aa15.82■□□□□ 0.12
CYSTM1-202ENST00000504227 PIK3AP1Q6ZUJ8 805 aa15.82■□□□□ 0.12
CYSTM1-202ENST00000504227 ABRAQ8N0Z2 381 aa15.82■□□□□ 0.12
CYSTM1-202ENST00000504227 NOL7Q9UMY1 257 aaKnown RBP15.82■□□□□ 0.12
CYSTM1-202ENST00000504227 KIF22Q14807 665 aa15.81■□□□□ 0.12
CYSTM1-202ENST00000504227 GPR142Q7Z601 462 aa15.81■□□□□ 0.12
CYSTM1-202ENST00000504227 DNAJC5GQ8N7S2 189 aa15.81■□□□□ 0.12
CYSTM1-202ENST00000504227 ANO3Q9BYT9 981 aa15.81■□□□□ 0.12
CYSTM1-202ENST00000504227 PTPREP23469 700 aa15.8■□□□□ 0.12
CYSTM1-202ENST00000504227 SP3Q02447 781 aa15.8■□□□□ 0.12
CYSTM1-202ENST00000504227 NOM1Q5C9Z4 860 aaKnown RBP15.8■□□□□ 0.12
CYSTM1-202ENST00000504227 RILPL1Q5EBL4 403 aa15.8■□□□□ 0.12
CYSTM1-202ENST00000504227 TBCKQ8TEA7 893 aa15.8■□□□□ 0.12
CYSTM1-202ENST00000504227 PGBD1Q96JS3 809 aa15.8■□□□□ 0.12
CYSTM1-202ENST00000504227 ZNF396Q96N95 335 aaPredicted RBP15.8■□□□□ 0.12
CYSTM1-202ENST00000504227 TAAR1Q96RJ0 339 aa15.8■□□□□ 0.12
CYSTM1-202ENST00000504227 RMDN3Q96TC7 470 aa15.8■□□□□ 0.12
CYSTM1-202ENST00000504227 COL20A1Q9P218 1284 aa15.8■□□□□ 0.12
CYSTM1-202ENST00000504227 FAM205CA6NFA0 338 aa15.79■□□□□ 0.12
CYSTM1-202ENST00000504227 SLC15A5A6NIM6 579 aa15.79■□□□□ 0.12
CYSTM1-202ENST00000504227 ATP2B1P20020 1258 aa15.79■□□□□ 0.12
CYSTM1-202ENST00000504227 ADORA2AP29274 412 aa15.79■□□□□ 0.12
CYSTM1-202ENST00000504227 SREBF1P36956 1147 aa15.79■□□□□ 0.12
CYSTM1-202ENST00000504227 TRAPPC10P48553 1259 aa15.79■□□□□ 0.12
CYSTM1-202ENST00000504227 FCGRTP55899 365 aa15.79■□□□□ 0.12
CYSTM1-202ENST00000504227 INF2Q27J81 1249 aa15.79■□□□□ 0.12
CYSTM1-202ENST00000504227 EARS2Q5JPH6 523 aaKnown RBP15.79■□□□□ 0.12
CYSTM1-202ENST00000504227 ARHGEF16Q5VV41 709 aa15.79■□□□□ 0.12
CYSTM1-202ENST00000504227 MYSM1Q5VVJ2 828 aa15.79■□□□□ 0.12
CYSTM1-202ENST00000504227 DNERQ8NFT8 737 aa15.79■□□□□ 0.12
CYSTM1-202ENST00000504227 NSUN6Q8TEA1 469 aaKnown RBP15.79■□□□□ 0.12
CYSTM1-202ENST00000504227 SLC5A4Q9NY91 659 aa15.79■□□□□ 0.12
CYSTM1-202ENST00000504227 ADD3Q9UEY8 706 aaKnown RBP15.79■□□□□ 0.12
CYSTM1-202ENST00000504227 THSD7BQ9C0I4 1608 aa15.79■□□□□ 0.12
CYSTM1-202ENST00000504227 DNAJC25-GNG10A0A024R161 153 aa15.78■□□□□ 0.12
CYSTM1-202ENST00000504227 B4DLN1 442 aa15.78■□□□□ 0.12
CYSTM1-202ENST00000504227 GPR25O00155 361 aa15.78■□□□□ 0.12
CYSTM1-202ENST00000504227 TNPO2O14787 897 aaKnown RBP15.78■□□□□ 0.12
CYSTM1-202ENST00000504227 ECM2O94769 699 aaPredicted RBP15.78■□□□□ 0.12
CYSTM1-202ENST00000504227 PGK2P07205 417 aa15.78■□□□□ 0.12
CYSTM1-202ENST00000504227 USP11P51784 963 aa15.78■□□□□ 0.12
CYSTM1-202ENST00000504227 LACTBP83111 547 aaPredicted RBP15.78■□□□□ 0.12
CYSTM1-202ENST00000504227 CNTN2Q02246 1040 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms