RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 MTMR7Q9Y216 660 aa8.25□□□□□ -1.09
PDGFC-203ENST00000502773 C4AP0C0L4 1744 aa8.25□□□□□ -1.09
PDGFC-203ENST00000502773 C4BP0C0L5 1744 aa8.25□□□□□ -1.09
PDGFC-203ENST00000502773 CYP2D6P10635 497 aa8.25□□□□□ -1.09
PDGFC-203ENST00000502773 COL9A3Q14050 684 aaPredicted RBP8.25□□□□□ -1.09
PDGFC-203ENST00000502773 DIXDC1Q155Q3 683 aa8.25□□□□□ -1.09
PDGFC-203ENST00000502773 UNC13DQ70J99 1090 aa8.25□□□□□ -1.09
PDGFC-203ENST00000502773 KIAA1328Q86T90 577 aa8.25□□□□□ -1.09
PDGFC-203ENST00000502773 P2RX5Q93086 422 aa8.25□□□□□ -1.09
PDGFC-203ENST00000502773 EPSTI1Q96J88 318 aa8.25□□□□□ -1.09
PDGFC-203ENST00000502773 FAM20AQ96MK3 541 aa8.25□□□□□ -1.09
PDGFC-203ENST00000502773 MXD3Q9BW11 206 aa8.25□□□□□ -1.09
PDGFC-203ENST00000502773 COL24A1Q17RW2 1714 aa8.25□□□□□ -1.09
PDGFC-203ENST00000502773 FDX1P10109 184 aa8.25□□□□□ -1.09
PDGFC-203ENST00000502773 SRGNP10124 158 aa8.25□□□□□ -1.09
PDGFC-203ENST00000502773 TRIM21P19474 475 aaKnown RBP8.25□□□□□ -1.09
PDGFC-203ENST00000502773 ZNF543Q08ER8 600 aa8.25□□□□□ -1.09
PDGFC-203ENST00000502773 SPECC1Q5M775 1068 aa8.25□□□□□ -1.09
PDGFC-203ENST00000502773 FAM160B2Q86V87 743 aa8.25□□□□□ -1.09
PDGFC-203ENST00000502773 SLC17A8Q8NDX2 589 aa8.25□□□□□ -1.09
PDGFC-203ENST00000502773 GOLGA1Q92805 767 aa8.25□□□□□ -1.09
PDGFC-203ENST00000502773 ALS2CR12Q96Q35 445 aa8.25□□□□□ -1.09
PDGFC-203ENST00000502773 TSKSQ9UJT2 592 aa8.25□□□□□ -1.09
PDGFC-203ENST00000502773 CHD4Q14839 1912 aa8.25□□□□□ -1.09
PDGFC-203ENST00000502773 RIMBP2O15034 1052 aa8.25□□□□□ -1.09
PDGFC-203ENST00000502773 CCDC144BQ3MJ40 725 aa8.25□□□□□ -1.09
PDGFC-203ENST00000502773 TCP11X2Q5H9J9 407 aa8.25□□□□□ -1.09
PDGFC-203ENST00000502773 EP400NLQ6ZTU2 488 aa8.25□□□□□ -1.09
PDGFC-203ENST00000502773 KRT26Q7Z3Y9 468 aa8.25□□□□□ -1.09
PDGFC-203ENST00000502773 MKL1Q969V6 931 aa8.25□□□□□ -1.09
PDGFC-203ENST00000502773 DYNLL2Q96FJ2 89 aa8.25□□□□□ -1.09
PDGFC-203ENST00000502773 CEP95Q96GE4 821 aa8.25□□□□□ -1.09
PDGFC-203ENST00000502773 PCDHA12Q9UN75 941 aa8.25□□□□□ -1.09
PDGFC-203ENST00000502773 THSD7AQ9UPZ6 1657 aa8.25□□□□□ -1.09
PDGFC-203ENST00000502773 TRIM37O94972 964 aa8.24□□□□□ -1.09
PDGFC-203ENST00000502773 CRKP46108 304 aa8.24□□□□□ -1.09
PDGFC-203ENST00000502773 TBC1D8BQ0IIM8 1120 aa8.24□□□□□ -1.09
PDGFC-203ENST00000502773 WHAMMP3Q1A5X7 153 aa8.24□□□□□ -1.09
PDGFC-203ENST00000502773 KIF4BQ2VIQ3 1234 aa8.24□□□□□ -1.09
PDGFC-203ENST00000502773 CCDC91Q7Z6B0 441 aa8.24□□□□□ -1.09
PDGFC-203ENST00000502773 KRT222Q8N1A0 295 aa8.24□□□□□ -1.09
PDGFC-203ENST00000502773 GPR161Q8N6U8 529 aaKnown RBP8.24□□□□□ -1.09
PDGFC-203ENST00000502773 TBCKQ8TEA7 893 aa8.24□□□□□ -1.09
PDGFC-203ENST00000502773 LARP4BQ92615 738 aaKnown RBP8.24□□□□□ -1.09
PDGFC-203ENST00000502773 IDI2Q9BXS1 227 aa8.24□□□□□ -1.09
PDGFC-203ENST00000502773 KBTBD4Q9NVX7 518 aa8.24□□□□□ -1.09
PDGFC-203ENST00000502773 MRPL11Q9Y3B7 192 aaKnown RBP8.24□□□□□ -1.09
PDGFC-203ENST00000502773 AP5Z1O43299 807 aa8.24□□□□□ -1.09
PDGFC-203ENST00000502773 DKC1O60832 514 aaKnown RBP eCLIP8.24□□□□□ -1.09
PDGFC-203ENST00000502773 DTNBO60941 627 aa8.24□□□□□ -1.09
PDGFC-203ENST00000502773 ABCD1P33897 745 aa8.24□□□□□ -1.09
PDGFC-203ENST00000502773 USP8P40818 1118 aa8.24□□□□□ -1.09
PDGFC-203ENST00000502773 PPP2R5AQ15172 486 aa8.24□□□□□ -1.09
PDGFC-203ENST00000502773 CDKAL1Q5VV42 579 aa8.24□□□□□ -1.09
PDGFC-203ENST00000502773 SLFN13Q68D06 897 aa8.24□□□□□ -1.09
PDGFC-203ENST00000502773 SYT10Q6XYQ8 523 aa8.24□□□□□ -1.09
PDGFC-203ENST00000502773 ADSSL1Q8N142 457 aa8.24□□□□□ -1.09
PDGFC-203ENST00000502773 GUF1Q8N442 669 aaKnown RBP8.24□□□□□ -1.09
PDGFC-203ENST00000502773 GIMAP8Q8ND71 665 aaPredicted RBP8.24□□□□□ -1.09
PDGFC-203ENST00000502773 GOLGA5Q8TBA6 731 aa8.24□□□□□ -1.09
PDGFC-203ENST00000502773 SNX29Q8TEQ0 813 aa8.24□□□□□ -1.09
PDGFC-203ENST00000502773 CEP63Q96MT8 703 aa8.24□□□□□ -1.09
PDGFC-203ENST00000502773 ADD3Q9UEY8 706 aaKnown RBP8.24□□□□□ -1.09
PDGFC-203ENST00000502773 DDX25Q9UHL0 483 aaKnown RBP8.24□□□□□ -1.09
PDGFC-203ENST00000502773 NOVP48745 357 aa8.24□□□□□ -1.09
PDGFC-203ENST00000502773 TNFAIP1Q13829 316 aa8.24□□□□□ -1.09
PDGFC-203ENST00000502773 CDC37Q16543 378 aaPredicted RBP8.24□□□□□ -1.09
PDGFC-203ENST00000502773 ABCB5Q2M3G0 1257 aa8.24□□□□□ -1.09
PDGFC-203ENST00000502773 FIGNQ5HY92 759 aa8.24□□□□□ -1.09
PDGFC-203ENST00000502773 FBXO11Q86XK2 927 aa8.24□□□□□ -1.09
PDGFC-203ENST00000502773 CCDC155Q8N6L0 562 aa8.24□□□□□ -1.09
PDGFC-203ENST00000502773 SLC16A10Q8TF71 515 aa8.24□□□□□ -1.09
PDGFC-203ENST00000502773 GPKOWQ92917 476 aaPredicted RBP eCLIP8.24□□□□□ -1.09
PDGFC-203ENST00000502773 CALR3Q96L12 384 aaKnown RBP8.24□□□□□ -1.09
PDGFC-203ENST00000502773 NOC4LQ9BVI4 516 aaKnown RBP8.24□□□□□ -1.09
PDGFC-203ENST00000502773 METTL14Q9HCE5 456 aaKnown RBP8.24□□□□□ -1.09
PDGFC-203ENST00000502773 DNM3Q9UQ16 869 aa8.24□□□□□ -1.09
PDGFC-203ENST00000502773 LGALS16A8MUM7 142 aa8.23□□□□□ -1.09
PDGFC-203ENST00000502773 CALUO43852 315 aaPredicted RBP8.23□□□□□ -1.09
PDGFC-203ENST00000502773 PDHBP11177 359 aa8.23□□□□□ -1.09
PDGFC-203ENST00000502773 GAP43P17677 238 aa8.23□□□□□ -1.09
PDGFC-203ENST00000502773 TBX2Q13207 712 aaPredicted RBP8.23□□□□□ -1.09
PDGFC-203ENST00000502773 PDXDC2PQ6P474 469 aa8.23□□□□□ -1.09
PDGFC-203ENST00000502773 CACNA2D4Q7Z3S7 1137 aa8.23□□□□□ -1.09
PDGFC-203ENST00000502773 PIGSQ96S52 555 aa8.23□□□□□ -1.09
PDGFC-203ENST00000502773 MAF1Q9H063 256 aa8.23□□□□□ -1.09
PDGFC-203ENST00000502773 IL17RBQ9NRM6 502 aa8.23□□□□□ -1.09
PDGFC-203ENST00000502773 MFAP3LO75121 409 aa8.23□□□□□ -1.09
PDGFC-203ENST00000502773 TBCAO75347 108 aaKnown RBP8.23□□□□□ -1.09
PDGFC-203ENST00000502773 ANXA13P27216 316 aa8.23□□□□□ -1.09
PDGFC-203ENST00000502773 CCT6AP40227 531 aaKnown RBP8.23□□□□□ -1.09
PDGFC-203ENST00000502773 TXKP42681 527 aa8.23□□□□□ -1.09
PDGFC-203ENST00000502773 CETN1Q12798 172 aa8.23□□□□□ -1.09
PDGFC-203ENST00000502773 KIF5AQ12840 1032 aa8.23□□□□□ -1.09
PDGFC-203ENST00000502773 FKBP1CQ5VVH2 108 aa8.23□□□□□ -1.09
PDGFC-203ENST00000502773 ARMCX5Q6P1M9 558 aa8.23□□□□□ -1.09
PDGFC-203ENST00000502773 MYOCDQ8IZQ8 938 aa8.23□□□□□ -1.09
PDGFC-203ENST00000502773 PIAS4Q8N2W9 510 aaPredicted RBP8.23□□□□□ -1.09
PDGFC-203ENST00000502773 BTAF1O14981 1849 aa8.23□□□□□ -1.09
PDGFC-203ENST00000502773 A0A1W2PQJ5 194 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms