RNA–Protein interactions for RNA: ENST00000502563.5

UBE2D3-212, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-212ENST00000502563 SMCHD1A6NHR9 2005 aa12.41□□□□□ -0.42
UBE2D3-212ENST00000502563 PIK3CDO00329 1044 aa12.41□□□□□ -0.42
UBE2D3-212ENST00000502563 NFIBO00712 420 aa12.41□□□□□ -0.42
UBE2D3-212ENST00000502563 OPLAHO14841 1288 aa12.41□□□□□ -0.42
UBE2D3-212ENST00000502563 DHX16O60231 1041 aaKnown RBP12.41□□□□□ -0.42
UBE2D3-212ENST00000502563 PPP1R11O60927 126 aaPredicted RBP12.41□□□□□ -0.42
UBE2D3-212ENST00000502563 CCL5P13501 91 aa12.41□□□□□ -0.42
UBE2D3-212ENST00000502563 CPA1P15085 419 aa12.41□□□□□ -0.42
UBE2D3-212ENST00000502563 IFNAR1P17181 557 aa12.41□□□□□ -0.42
UBE2D3-212ENST00000502563 EDNRBP24530 442 aa12.41□□□□□ -0.42
UBE2D3-212ENST00000502563 RPS6P62753 249 aaKnown RBP12.41□□□□□ -0.42
UBE2D3-212ENST00000502563 CACNB2Q08289 660 aaPredicted RBP12.41□□□□□ -0.42
UBE2D3-212ENST00000502563 APOBRQ0VD83 1088 aa12.41□□□□□ -0.42
UBE2D3-212ENST00000502563 NTRK3Q16288 839 aa12.41□□□□□ -0.42
UBE2D3-212ENST00000502563 CCL14Q16627 93 aa12.41□□□□□ -0.42
UBE2D3-212ENST00000502563 RNF207Q6ZRF8 634 aa12.41□□□□□ -0.42
UBE2D3-212ENST00000502563 ANKLE1Q8NAG6 615 aa12.41□□□□□ -0.42
UBE2D3-212ENST00000502563 MPHOSPH6Q99547 160 aaKnown RBP12.41□□□□□ -0.42
UBE2D3-212ENST00000502563 RNF26Q9BY78 433 aaPredicted RBP12.41□□□□□ -0.42
UBE2D3-212ENST00000502563 C22orf23Q9BZE7 217 aa12.41□□□□□ -0.42
UBE2D3-212ENST00000502563 UPF3BQ9BZI7 483 aaKnown RBP12.41□□□□□ -0.42
UBE2D3-212ENST00000502563 GLT8D2Q9H1C3 349 aa12.41□□□□□ -0.42
UBE2D3-212ENST00000502563 ABHD16BQ9H3Z7 469 aa12.41□□□□□ -0.42
UBE2D3-212ENST00000502563 HOMER2Q9NSB8 354 aa12.41□□□□□ -0.42
UBE2D3-212ENST00000502563 KIAA0100Q14667 2235 aaKnown RBP12.41□□□□□ -0.42
UBE2D3-212ENST00000502563 SEPT4O43236 478 aa12.4□□□□□ -0.42
UBE2D3-212ENST00000502563 PLEKHA8P1O95397 391 aa12.4□□□□□ -0.42
UBE2D3-212ENST00000502563 PGK2P07205 417 aa12.4□□□□□ -0.42
UBE2D3-212ENST00000502563 CDC27P30260 824 aa12.4□□□□□ -0.42
UBE2D3-212ENST00000502563 IFFO2Q5TF58 517 aa12.4□□□□□ -0.42
UBE2D3-212ENST00000502563 IWS1Q96ST2 819 aa12.4□□□□□ -0.42
UBE2D3-212ENST00000502563 KIF2CQ99661 725 aa12.4□□□□□ -0.42
UBE2D3-212ENST00000502563 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.4□□□□□ -0.42
UBE2D3-212ENST00000502563 RNF208Q9H0X6 261 aa12.4□□□□□ -0.42
UBE2D3-212ENST00000502563 LCTP09848 1927 aa12.4□□□□□ -0.42
UBE2D3-212ENST00000502563 FRMPD4Q14CM0 1322 aa12.39□□□□□ -0.43
UBE2D3-212ENST00000502563 ESYT2A0FGR8 921 aa12.39□□□□□ -0.43
UBE2D3-212ENST00000502563 SOWAHBA6NEL2 793 aa12.39□□□□□ -0.43
UBE2D3-212ENST00000502563 PRPF3O43395 683 aaKnown RBP12.39□□□□□ -0.43
UBE2D3-212ENST00000502563 SGPL1O95470 568 aa12.39□□□□□ -0.43
UBE2D3-212ENST00000502563 RXRAP19793 462 aa12.39□□□□□ -0.43
UBE2D3-212ENST00000502563 SNAP25P60880 206 aa12.39□□□□□ -0.43
UBE2D3-212ENST00000502563 NKX3-2P78367 333 aa12.39□□□□□ -0.43
UBE2D3-212ENST00000502563 BAATQ14032 418 aaPredicted RBP12.39□□□□□ -0.43
UBE2D3-212ENST00000502563 MTFR1Q15390 333 aa12.39□□□□□ -0.43
UBE2D3-212ENST00000502563 USH1GQ495M9 461 aa12.39□□□□□ -0.43
UBE2D3-212ENST00000502563 CPLX2Q6PUV4 134 aaKnown RBP12.39□□□□□ -0.43
UBE2D3-212ENST00000502563 NSMFQ6X4W1 530 aa12.39□□□□□ -0.43
UBE2D3-212ENST00000502563 HOMER1Q86YM7 354 aa12.39□□□□□ -0.43
UBE2D3-212ENST00000502563 TBC1D32Q96NH3 1257 aa12.39□□□□□ -0.43
UBE2D3-212ENST00000502563 BACH2Q9BYV9 841 aa12.39□□□□□ -0.43
UBE2D3-212ENST00000502563 KATNBL1Q9H079 304 aa12.39□□□□□ -0.43
UBE2D3-212ENST00000502563 UNC93B1Q9H1C4 597 aa12.39□□□□□ -0.43
UBE2D3-212ENST00000502563 VAT1LQ9HCJ6 419 aa12.39□□□□□ -0.43
UBE2D3-212ENST00000502563 BIN2Q9UBW5 565 aaPredicted RBP12.39□□□□□ -0.43
UBE2D3-212ENST00000502563 OGDHLQ9ULD0 1010 aa12.39□□□□□ -0.43
UBE2D3-212ENST00000502563 CNPY2Q9Y2B0 182 aa12.39□□□□□ -0.43
UBE2D3-212ENST00000502563 BAZ2BQ9UIF8 2168 aaKnown RBP12.39□□□□□ -0.43
UBE2D3-212ENST00000502563 ASTN1O14525 1302 aa12.38□□□□□ -0.43
UBE2D3-212ENST00000502563 LRRC37A2A6NM11 1700 aa12.38□□□□□ -0.43
UBE2D3-212ENST00000502563 PTPDC1A2A3K4 754 aa12.38□□□□□ -0.43
UBE2D3-212ENST00000502563 PFKFB2O60825 505 aa12.38□□□□□ -0.43
UBE2D3-212ENST00000502563 CDKL5O76039 1030 aa12.38□□□□□ -0.43
UBE2D3-212ENST00000502563 ECM2O94769 699 aaPredicted RBP12.38□□□□□ -0.43
UBE2D3-212ENST00000502563 SNAI1O95863 264 aaPredicted RBP12.38□□□□□ -0.43
UBE2D3-212ENST00000502563 ZNF865P0CJ78 1059 aaPredicted RBP12.38□□□□□ -0.43
UBE2D3-212ENST00000502563 CYP2C19P33261 490 aa12.38□□□□□ -0.43
UBE2D3-212ENST00000502563 ADD1P35611 737 aaKnown RBP12.38□□□□□ -0.43
UBE2D3-212ENST00000502563 ALDH5A1P51649 535 aaPredicted RBP12.38□□□□□ -0.43
UBE2D3-212ENST00000502563 RABEP1Q15276 862 aa12.38□□□□□ -0.43
UBE2D3-212ENST00000502563 PFKFB3Q16875 520 aaPredicted RBP12.38□□□□□ -0.43
UBE2D3-212ENST00000502563 MCTP2Q6DN12 878 aa12.38□□□□□ -0.43
UBE2D3-212ENST00000502563 ARMCX2Q7L311 632 aa12.38□□□□□ -0.43
UBE2D3-212ENST00000502563 UBE2Q1Q7Z7E8 422 aa12.38□□□□□ -0.43
UBE2D3-212ENST00000502563 CCDC144CPQ8IYA2 1237 aa12.38□□□□□ -0.43
UBE2D3-212ENST00000502563 SYTL5Q8TDW5 730 aaPredicted RBP12.38□□□□□ -0.43
UBE2D3-212ENST00000502563 NSUN6Q8TEA1 469 aaKnown RBP12.38□□□□□ -0.43
UBE2D3-212ENST00000502563 U2AF1L4Q8WU68 220 aaKnown RBP12.38□□□□□ -0.43
UBE2D3-212ENST00000502563 VTA1Q9NP79 307 aa12.38□□□□□ -0.43
UBE2D3-212ENST00000502563 SH3GLB2Q9NR46 395 aa12.38□□□□□ -0.43
UBE2D3-212ENST00000502563 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.38□□□□□ -0.43
UBE2D3-212ENST00000502563 BARHL2Q9NY43 387 aa12.38□□□□□ -0.43
UBE2D3-212ENST00000502563 DDX20Q9UHI6 824 aaKnown RBP12.38□□□□□ -0.43
UBE2D3-212ENST00000502563 Q9Y3F1 56 aa12.38□□□□□ -0.43
UBE2D3-212ENST00000502563 STK36Q9NRP7 1315 aa12.37□□□□□ -0.43
UBE2D3-212ENST00000502563 RBM47A0AV96 593 aaKnown RBP12.37□□□□□ -0.43
UBE2D3-212ENST00000502563 CCDC85CA6NKD9 419 aa12.37□□□□□ -0.43
UBE2D3-212ENST00000502563 STAM2O75886 525 aa12.37□□□□□ -0.43
UBE2D3-212ENST00000502563 AKR1A1P14550 325 aa12.37□□□□□ -0.43
UBE2D3-212ENST00000502563 NEK4P51957 841 aa12.37□□□□□ -0.43
UBE2D3-212ENST00000502563 AK2P54819 239 aa12.37□□□□□ -0.43
UBE2D3-212ENST00000502563 CNTN2Q02246 1040 aa12.37□□□□□ -0.43
UBE2D3-212ENST00000502563 TRIM32Q13049 653 aa12.37□□□□□ -0.43
UBE2D3-212ENST00000502563 XRRA1Q6P2D8 792 aa12.37□□□□□ -0.43
UBE2D3-212ENST00000502563 SLC30A10Q6XR72 485 aa12.37□□□□□ -0.43
UBE2D3-212ENST00000502563 CCDC12Q8WUD4 166 aaPredicted RBP12.37□□□□□ -0.43
UBE2D3-212ENST00000502563 GCOM1H8Y6P7 765 aaPredicted RBP12.36□□□□□ -0.43
UBE2D3-212ENST00000502563 MEIS2O14770 477 aa12.36□□□□□ -0.43
UBE2D3-212ENST00000502563 POLR2MP0CAP2 368 aa12.36□□□□□ -0.43
UBE2D3-212ENST00000502563 SCG2P13521 617 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms