RNA–Protein interactions for RNA: ENST00000502342.1

SMAD1-203, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-203ENST00000502342 RCSD1Q6JBY9 416 aa3.93□□□□□ -1.78
SMAD1-203ENST00000502342 EEPD1Q7L9B9 569 aa3.93□□□□□ -1.78
SMAD1-203ENST00000502342 TMC6Q7Z403 805 aa3.93□□□□□ -1.78
SMAD1-203ENST00000502342 TRIM55Q9BYV6 548 aa3.93□□□□□ -1.78
SMAD1-203ENST00000502342 TANGO6Q9C0B7 1094 aa3.93□□□□□ -1.78
SMAD1-203ENST00000502342 IRF2BPLQ9H1B7 796 aa3.93□□□□□ -1.78
SMAD1-203ENST00000502342 CNTD2Q9H8S5 307 aa3.93□□□□□ -1.78
SMAD1-203ENST00000502342 PDLIM7Q9NR12 457 aa3.93□□□□□ -1.78
SMAD1-203ENST00000502342 CYP26B1Q9NR63 512 aa3.93□□□□□ -1.78
SMAD1-203ENST00000502342 TMEFF2Q9UIK5 374 aaPredicted RBP3.93□□□□□ -1.78
SMAD1-203ENST00000502342 DBR1Q9UK59 544 aaKnown RBP3.93□□□□□ -1.78
SMAD1-203ENST00000502342 CCDC85CA6NKD9 419 aa3.92□□□□□ -1.78
SMAD1-203ENST00000502342 AGRPO00253 132 aa3.92□□□□□ -1.78
SMAD1-203ENST00000502342 ABLIM1O14639 778 aa3.92□□□□□ -1.78
SMAD1-203ENST00000502342 NPHS1O60500 1241 aa3.92□□□□□ -1.78
SMAD1-203ENST00000502342 ATP2B1P20020 1258 aa3.92□□□□□ -1.78
SMAD1-203ENST00000502342 GRIA2P42262 883 aa3.92□□□□□ -1.78
SMAD1-203ENST00000502342 YBX1P67809 324 aaKnown RBP3.92□□□□□ -1.78
SMAD1-203ENST00000502342 CYP4F3Q08477 520 aa3.92□□□□□ -1.78
SMAD1-203ENST00000502342 KCNA10Q16322 511 aa3.92□□□□□ -1.78
SMAD1-203ENST00000502342 OLFML2BQ68BL8 750 aa3.92□□□□□ -1.78
SMAD1-203ENST00000502342 MBLAC2Q68D91 279 aa3.92□□□□□ -1.78
SMAD1-203ENST00000502342 RPTNQ6XPR3 784 aa3.92□□□□□ -1.78
SMAD1-203ENST00000502342 LDHDQ86WU2 507 aa3.92□□□□□ -1.78
SMAD1-203ENST00000502342 ZNF227Q86WZ6 799 aa3.92□□□□□ -1.78
SMAD1-203ENST00000502342 CKAP2LQ8IYA6 745 aa3.92□□□□□ -1.78
SMAD1-203ENST00000502342 LZTR1Q8N653 840 aa3.92□□□□□ -1.78
SMAD1-203ENST00000502342 BHLHE22Q8NFJ8 381 aaPredicted RBP3.92□□□□□ -1.78
SMAD1-203ENST00000502342 FRS2Q8WU20 508 aa3.92□□□□□ -1.78
SMAD1-203ENST00000502342 COPS5Q92905 334 aa3.92□□□□□ -1.78
SMAD1-203ENST00000502342 NKX2-4Q9H2Z4 354 aa3.92□□□□□ -1.78
SMAD1-203ENST00000502342 TNFRSF12AQ9NP84 129 aa3.92□□□□□ -1.78
SMAD1-203ENST00000502342 FBLN5Q9UBX5 448 aa3.92□□□□□ -1.78
SMAD1-203ENST00000502342 MBD1Q9UIS9 605 aaPredicted RBP3.92□□□□□ -1.78
SMAD1-203ENST00000502342 CNOT6Q9ULM6 557 aaKnown RBP3.92□□□□□ -1.78
SMAD1-203ENST00000502342 PLA2G2DQ9UNK4 145 aa3.92□□□□□ -1.78
SMAD1-203ENST00000502342 SIT1Q9Y3P8 196 aa3.92□□□□□ -1.78
SMAD1-203ENST00000502342 TRBV23OR9-2A0A075B6M9 112 aa3.91□□□□□ -1.78
SMAD1-203ENST00000502342 U2SURPO15042 1029 aaKnown RBP3.91□□□□□ -1.78
SMAD1-203ENST00000502342 TSPAN15O95858 294 aa3.91□□□□□ -1.78
SMAD1-203ENST00000502342 DBHP09172 617 aa3.91□□□□□ -1.78
SMAD1-203ENST00000502342 GLDCP23378 1020 aa3.91□□□□□ -1.78
SMAD1-203ENST00000502342 HOXC12P31275 282 aa3.91□□□□□ -1.78
SMAD1-203ENST00000502342 CDR1P51861 262 aa3.91□□□□□ -1.78
SMAD1-203ENST00000502342 JAG1P78504 1218 aa3.91□□□□□ -1.78
SMAD1-203ENST00000502342 PRR5P85299 388 aa3.91□□□□□ -1.78
SMAD1-203ENST00000502342 TMEM62Q0P6H9 643 aa3.91□□□□□ -1.78
SMAD1-203ENST00000502342 SSPNQ14714 243 aa3.91□□□□□ -1.78
SMAD1-203ENST00000502342 DDR2Q16832 855 aa3.91□□□□□ -1.78
SMAD1-203ENST00000502342 VMACQ2NL98 169 aa3.91□□□□□ -1.78
SMAD1-203ENST00000502342 PAQR3Q6TCH7 311 aa3.91□□□□□ -1.78
SMAD1-203ENST00000502342 TEX2Q8IWB9 1127 aa3.91□□□□□ -1.78
SMAD1-203ENST00000502342 LRRC56Q8IYG6 542 aaPredicted RBP3.91□□□□□ -1.78
SMAD1-203ENST00000502342 NLGN2Q8NFZ4 835 aa3.91□□□□□ -1.78
SMAD1-203ENST00000502342 DPF3Q92784 378 aa3.91□□□□□ -1.78
SMAD1-203ENST00000502342 CHAMP1Q96JM3 812 aa3.91□□□□□ -1.78
SMAD1-203ENST00000502342 TOX2Q96NM4 488 aa3.91□□□□□ -1.78
SMAD1-203ENST00000502342 MARCH2Q9P0N8 246 aa3.91□□□□□ -1.78
SMAD1-203ENST00000502342 KCTD3Q9Y597 815 aa3.91□□□□□ -1.78
SMAD1-203ENST00000502342 A0A1W2PQU0 124 aa3.9□□□□□ -1.79
SMAD1-203ENST00000502342 NUAK1O60285 661 aa3.9□□□□□ -1.79
SMAD1-203ENST00000502342 SEMA7AO75326 666 aa3.9□□□□□ -1.79
SMAD1-203ENST00000502342 NTRK1P04629 796 aa3.9□□□□□ -1.79
SMAD1-203ENST00000502342 MED14OSP0DP75 135 aa3.9□□□□□ -1.79
SMAD1-203ENST00000502342 LCP1P13796 627 aa3.9□□□□□ -1.79
SMAD1-203ENST00000502342 LINC00310P59036 64 aa3.9□□□□□ -1.79
SMAD1-203ENST00000502342 PPP2R2AP63151 447 aa3.9□□□□□ -1.79
SMAD1-203ENST00000502342 ZNF200P98182 395 aaPredicted RBP3.9□□□□□ -1.79
SMAD1-203ENST00000502342 RAB33AQ14088 237 aa3.9□□□□□ -1.79
SMAD1-203ENST00000502342 CBX2Q14781 532 aaPredicted RBP3.9□□□□□ -1.79
SMAD1-203ENST00000502342 NR1I3Q14994 352 aa3.9□□□□□ -1.79
SMAD1-203ENST00000502342 SLC10A6Q3KNW5 377 aa3.9□□□□□ -1.79
SMAD1-203ENST00000502342 DENND5AQ6IQ26 1287 aa3.9□□□□□ -1.79
SMAD1-203ENST00000502342 ZC3H14Q6PJT7 736 aaKnown RBP3.9□□□□□ -1.79
SMAD1-203ENST00000502342 CEP68Q76N32 757 aa3.9□□□□□ -1.79
SMAD1-203ENST00000502342 CABP7Q86V35 215 aa3.9□□□□□ -1.79
SMAD1-203ENST00000502342 CILP2Q8IUL8 1156 aa3.9□□□□□ -1.79
SMAD1-203ENST00000502342 KREMEN2Q8NCW0 462 aa3.9□□□□□ -1.79
SMAD1-203ENST00000502342 NPLOC4Q8TAT6 608 aa3.9□□□□□ -1.79
SMAD1-203ENST00000502342 ZSCAN18Q8TBC5 510 aaPredicted RBP3.9□□□□□ -1.79
SMAD1-203ENST00000502342 MZB1Q8WU39 189 aa3.9□□□□□ -1.79
SMAD1-203ENST00000502342 DIO2Q92813 273 aa3.9□□□□□ -1.79
SMAD1-203ENST00000502342 CCDC140Q96MF4 163 aa3.9□□□□□ -1.79
SMAD1-203ENST00000502342 MMP19Q99542 508 aa3.9□□□□□ -1.79
SMAD1-203ENST00000502342 MTA3Q9BTC8 594 aa3.9□□□□□ -1.79
SMAD1-203ENST00000502342 EPN3Q9H201 632 aa3.9□□□□□ -1.79
SMAD1-203ENST00000502342 CD320Q9NPF0 282 aa3.9□□□□□ -1.79
SMAD1-203ENST00000502342 IRAK3Q9Y616 596 aa3.9□□□□□ -1.79
SMAD1-203ENST00000502342 C22orf46C9J442 243 aa3.89□□□□□ -1.79
SMAD1-203ENST00000502342 N4BP3O15049 544 aa3.89□□□□□ -1.79
SMAD1-203ENST00000502342 MEFVO15553 781 aaPredicted RBP3.89□□□□□ -1.79
SMAD1-203ENST00000502342 BUB1BO60566 1050 aaPredicted RBP3.89□□□□□ -1.79
SMAD1-203ENST00000502342 CPP00450 1065 aa3.89□□□□□ -1.79
SMAD1-203ENST00000502342 CYBBP04839 570 aa3.89□□□□□ -1.79
SMAD1-203ENST00000502342 ZSCAN22P10073 491 aaPredicted RBP3.89□□□□□ -1.79
SMAD1-203ENST00000502342 PI3P19957 117 aa3.89□□□□□ -1.79
SMAD1-203ENST00000502342 BCL6P41182 706 aa3.89□□□□□ -1.79
SMAD1-203ENST00000502342 MAPKAPK2P49137 400 aa3.89□□□□□ -1.79
SMAD1-203ENST00000502342 CORO7P57737 925 aa3.89□□□□□ -1.79
SMAD1-203ENST00000502342 PLEKHN1Q494U1 663 aaPredicted RBP3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms