RNA–Protein interactions for RNA: ENST00000499601.2

AC008393.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC008393.1, Length 1,454 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008393.1-201ENST00000499601 IGF2BP3O00425 579 aaKnown RBP eCLIP21.08■□□□□ 0.97
AC008393.1-201ENST00000499601 NCLP19338 710 aaKnown RBP21.08■□□□□ 0.97
AC008393.1-201ENST00000499601 EARS2Q5JPH6 523 aaKnown RBP21.08■□□□□ 0.97
AC008393.1-201ENST00000499601 IFNL1Q8IU54 200 aa21.08■□□□□ 0.97
AC008393.1-201ENST00000499601 REM2Q8IYK8 340 aaPredicted RBP21.08■□□□□ 0.97
AC008393.1-201ENST00000499601 TMEM260Q9NX78 707 aa21.08■□□□□ 0.97
AC008393.1-201ENST00000499601 RIPK3Q9Y572 518 aa21.08■□□□□ 0.97
AC008393.1-201ENST00000499601 SMCHD1A6NHR9 2005 aa21.08■□□□□ 0.96
AC008393.1-201ENST00000499601 SPDYE3A6NKU9 549 aa21.07■□□□□ 0.96
AC008393.1-201ENST00000499601 GOLGA6L22H0YM25 854 aa21.07■□□□□ 0.96
AC008393.1-201ENST00000499601 NFIBO00712 420 aa21.07■□□□□ 0.96
AC008393.1-201ENST00000499601 TM4SF4P48230 202 aa21.07■□□□□ 0.96
AC008393.1-201ENST00000499601 HSD17B4P51659 736 aa21.07■□□□□ 0.96
AC008393.1-201ENST00000499601 GRM1Q13255 1194 aa21.07■□□□□ 0.96
AC008393.1-201ENST00000499601 MUM1L1Q5H9M0 696 aa21.07■□□□□ 0.96
AC008393.1-201ENST00000499601 CAPNS2Q96L46 248 aa21.07■□□□□ 0.96
AC008393.1-201ENST00000499601 SCAND2PQ9GZW5 306 aaPredicted RBP21.07■□□□□ 0.96
AC008393.1-201ENST00000499601 FAM205CA6NFA0 338 aa21.07■□□□□ 0.96
AC008393.1-201ENST00000499601 CSPP1Q1MSJ5 1256 aa21.07■□□□□ 0.96
AC008393.1-201ENST00000499601 NOM1Q5C9Z4 860 aaKnown RBP21.07■□□□□ 0.96
AC008393.1-201ENST00000499601 PIAS4Q8N2W9 510 aaPredicted RBP21.07■□□□□ 0.96
AC008393.1-201ENST00000499601 USP28Q96RU2 1077 aa21.07■□□□□ 0.96
AC008393.1-201ENST00000499601 ANO3Q9BYT9 981 aa21.07■□□□□ 0.96
AC008393.1-201ENST00000499601 EHMT1Q9H9B1 1298 aa21.07■□□□□ 0.96
AC008393.1-201ENST00000499601 TXNRD2Q9NNW7 524 aa21.07■□□□□ 0.96
AC008393.1-201ENST00000499601 POLR3EQ9NVU0 708 aa21.07■□□□□ 0.96
AC008393.1-201ENST00000499601 CNPY2Q9Y2B0 182 aa21.07■□□□□ 0.96
AC008393.1-201ENST00000499601 HOXA13P31271 388 aaPredicted RBP21.06■□□□□ 0.96
AC008393.1-201ENST00000499601 ERVK-9P63128 1117 aa21.06■□□□□ 0.96
AC008393.1-201ENST00000499601 ERVK-24P63145 666 aa21.06■□□□□ 0.96
AC008393.1-201ENST00000499601 CCNA1P78396 465 aa21.06■□□□□ 0.96
AC008393.1-201ENST00000499601 TAF1CQ15572 869 aaPredicted RBP21.06■□□□□ 0.96
AC008393.1-201ENST00000499601 INF2Q27J81 1249 aa21.06■□□□□ 0.96
AC008393.1-201ENST00000499601 GPRC5AQ8NFJ5 357 aa21.06■□□□□ 0.96
AC008393.1-201ENST00000499601 TBCKQ8TEA7 893 aa21.06■□□□□ 0.96
AC008393.1-201ENST00000499601 CHAMP1Q96JM3 812 aa21.06■□□□□ 0.96
AC008393.1-201ENST00000499601 MOV10L1Q9BXT6 1211 aaKnown RBP21.06■□□□□ 0.96
AC008393.1-201ENST00000499601 RTEL1Q9NZ71 1219 aa21.06■□□□□ 0.96
AC008393.1-201ENST00000499601 TFIP11Q9UBB9 837 aaKnown RBP21.06■□□□□ 0.96
AC008393.1-201ENST00000499601 MORF4L1Q9UBU8 362 aa21.06■□□□□ 0.96
AC008393.1-201ENST00000499601 TOB1P50616 345 aaPredicted RBP21.05■□□□□ 0.96
AC008393.1-201ENST00000499601 ANO1Q5XXA6 986 aa21.05■□□□□ 0.96
AC008393.1-201ENST00000499601 NSMFQ6X4W1 530 aa21.05■□□□□ 0.96
AC008393.1-201ENST00000499601 RNF207Q6ZRF8 634 aa21.05■□□□□ 0.96
AC008393.1-201ENST00000499601 NEK8Q86SG6 692 aa21.05■□□□□ 0.96
AC008393.1-201ENST00000499601 SHCBP1Q8NEM2 672 aa21.05■□□□□ 0.96
AC008393.1-201ENST00000499601 TBC1D5Q92609 795 aa21.05■□□□□ 0.96
AC008393.1-201ENST00000499601 YEATS4O95619 227 aa21.04■□□□□ 0.96
AC008393.1-201ENST00000499601 ALDH1A1P00352 501 aa21.04■□□□□ 0.96
AC008393.1-201ENST00000499601 NASPP49321 788 aaPredicted RBP21.04■□□□□ 0.96
AC008393.1-201ENST00000499601 TTC38Q5R3I4 469 aa21.04■□□□□ 0.96
AC008393.1-201ENST00000499601 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.04■□□□□ 0.96
AC008393.1-201ENST00000499601 NCAPG2Q86XI2 1143 aa21.04■□□□□ 0.96
AC008393.1-201ENST00000499601 ANKRD13CQ8N6S4 541 aa21.04■□□□□ 0.96
AC008393.1-201ENST00000499601 PGBD1Q96JS3 809 aa21.04■□□□□ 0.96
AC008393.1-201ENST00000499601 SPATA32Q96LK8 384 aa21.04■□□□□ 0.96
AC008393.1-201ENST00000499601 NAP1L4Q99733 375 aaKnown RBP21.04■□□□□ 0.96
AC008393.1-201ENST00000499601 MROH8Q9H579 483 aa21.04■□□□□ 0.96
AC008393.1-201ENST00000499601 CEP131Q9UPN4 1083 aa21.04■□□□□ 0.96
AC008393.1-201ENST00000499601 FIBPO43427 364 aa21.03■□□□□ 0.96
AC008393.1-201ENST00000499601 PEX10O60683 326 aa21.03■□□□□ 0.96
AC008393.1-201ENST00000499601 BMP15O95972 392 aa21.03■□□□□ 0.96
AC008393.1-201ENST00000499601 ERCC3P19447 782 aa21.03■□□□□ 0.96
AC008393.1-201ENST00000499601 ATP2B1P20020 1258 aa21.03■□□□□ 0.96
AC008393.1-201ENST00000499601 RPS6P62753 249 aaKnown RBP21.03■□□□□ 0.96
AC008393.1-201ENST00000499601 FAM110CQ1W6H9 321 aa21.03■□□□□ 0.96
AC008393.1-201ENST00000499601 Q3C1V9 767 aa21.03■□□□□ 0.96
AC008393.1-201ENST00000499601 FCHSD1Q86WN1 690 aa21.03■□□□□ 0.96
AC008393.1-201ENST00000499601 ZFYVE28Q9HCC9 887 aa21.03■□□□□ 0.96
AC008393.1-201ENST00000499601 TCHHQ07283 1943 aa21.03■□□□□ 0.96
AC008393.1-201ENST00000499601 PFASO15067 1338 aa21.03■□□□□ 0.96
AC008393.1-201ENST00000499601 MCM4P33991 863 aa21.02■□□□□ 0.96
AC008393.1-201ENST00000499601 CEBPZQ03701 1054 aaKnown RBP21.02■□□□□ 0.96
AC008393.1-201ENST00000499601 ORC2Q13416 577 aaPredicted RBP21.02■□□□□ 0.96
AC008393.1-201ENST00000499601 STK38Q15208 465 aa21.02■□□□□ 0.96
AC008393.1-201ENST00000499601 SF3A1Q15459 793 aaKnown RBP21.02■□□□□ 0.96
AC008393.1-201ENST00000499601 ZIC5Q96T25 663 aa21.02■□□□□ 0.96
AC008393.1-201ENST00000499601 FTOQ9C0B1 505 aaKnown RBP eCLIP21.02■□□□□ 0.96
AC008393.1-201ENST00000499601 PCDHB6Q9Y5E3 794 aa21.02■□□□□ 0.96
AC008393.1-201ENST00000499601 CLIC4Q9Y696 253 aa21.02■□□□□ 0.96
AC008393.1-201ENST00000499601 ADGRA2Q96PE1 1338 aa21.02■□□□□ 0.96
AC008393.1-201ENST00000499601 DDX11L8A8MPP1 907 aa21.01■□□□□ 0.95
AC008393.1-201ENST00000499601 SREBF1P36956 1147 aa21.01■□□□□ 0.95
AC008393.1-201ENST00000499601 USP11P51784 963 aa21.01■□□□□ 0.95
AC008393.1-201ENST00000499601 BAATQ14032 418 aaPredicted RBP21.01■□□□□ 0.95
AC008393.1-201ENST00000499601 LETM2Q2VYF4 491 aa21.01■□□□□ 0.95
AC008393.1-201ENST00000499601 SLC30A10Q6XR72 485 aa21.01■□□□□ 0.95
AC008393.1-201ENST00000499601 ANKRD35Q8N283 1001 aa21.01■□□□□ 0.95
AC008393.1-201ENST00000499601 TMEM87AQ8NBN3 555 aa21.01■□□□□ 0.95
AC008393.1-201ENST00000499601 LINC00301Q8NCQ3 95 aa21.01■□□□□ 0.95
AC008393.1-201ENST00000499601 SYTL5Q8TDW5 730 aaPredicted RBP21.01■□□□□ 0.95
AC008393.1-201ENST00000499601 LEO1Q8WVC0 666 aaPredicted RBP21.01■□□□□ 0.95
AC008393.1-201ENST00000499601 A1CFQ9NQ94 594 aaKnown RBP21.01■□□□□ 0.95
AC008393.1-201ENST00000499601 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.01■□□□□ 0.95
AC008393.1-201ENST00000499601 CYP39A1Q9NYL5 469 aa21.01■□□□□ 0.95
AC008393.1-201ENST00000499601 RCOR1Q9UKL0 485 aa21.01■□□□□ 0.95
AC008393.1-201ENST00000499601 ELP1O95163 1332 aa21.01■□□□□ 0.95
AC008393.1-201ENST00000499601 TLR2O60603 784 aa21.01■□□□□ 0.95
AC008393.1-201ENST00000499601 AOC2O75106 756 aa21.01■□□□□ 0.95
AC008393.1-201ENST00000499601 PTMSP20962 102 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms