RNA–Protein interactions for RNA: ENST00000497565.1

BRPF1-208, Transcript of bromodomain and PHD finger containing 1, humanhuman

TSL 3

Gene BRPF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF1-208ENST00000497565 TRIM43Q96BQ3 446 aaPredicted RBP15.18■□□□□ 0.02
BRPF1-208ENST00000497565 MTA3Q9BTC8 594 aa15.18■□□□□ 0.02
BRPF1-208ENST00000497565 UBA5Q9GZZ9 404 aa15.18■□□□□ 0.02
BRPF1-208ENST00000497565 MAP3K20Q9NYL2 800 aaKnown RBP15.18■□□□□ 0.02
BRPF1-208ENST00000497565 MRPL11Q9Y3B7 192 aaKnown RBP15.18■□□□□ 0.02
BRPF1-208ENST00000497565 ASTN1O14525 1302 aa15.17■□□□□ 0.02
BRPF1-208ENST00000497565 LAMA3Q16787 3333 aa15.17■□□□□ 0.02
BRPF1-208ENST00000497565 DYNC1LI2O43237 492 aaPredicted RBP15.17■□□□□ 0.02
BRPF1-208ENST00000497565 ADCY6O43306 1168 aa15.17■□□□□ 0.02
BRPF1-208ENST00000497565 CYP21A2P08686 494 aa15.17■□□□□ 0.02
BRPF1-208ENST00000497565 SMPD1P17405 629 aa15.17■□□□□ 0.02
BRPF1-208ENST00000497565 CALML3P27482 149 aa15.17■□□□□ 0.02
BRPF1-208ENST00000497565 PDE4DQ08499 809 aa15.17■□□□□ 0.02
BRPF1-208ENST00000497565 SEC23AQ15436 765 aa15.17■□□□□ 0.02
BRPF1-208ENST00000497565 CDC37Q16543 378 aaPredicted RBP15.17■□□□□ 0.02
BRPF1-208ENST00000497565 FAM109BQ6ICB4 259 aaPredicted RBP15.17■□□□□ 0.02
BRPF1-208ENST00000497565 FBXO11Q86XK2 927 aa15.17■□□□□ 0.02
BRPF1-208ENST00000497565 MAP4K1Q92918 833 aa15.17■□□□□ 0.02
BRPF1-208ENST00000497565 LRCH3Q96II8 777 aa15.17■□□□□ 0.02
BRPF1-208ENST00000497565 SZT2Q5T011 3432 aa15.16■□□□□ 0.02
BRPF1-208ENST00000497565 MYADML2A6NDP7 307 aa15.16■□□□□ 0.02
BRPF1-208ENST00000497565 CTAGE5O15320 804 aa15.16■□□□□ 0.02
BRPF1-208ENST00000497565 DHX16O60231 1041 aaKnown RBP15.16■□□□□ 0.02
BRPF1-208ENST00000497565 KPNA6O60684 536 aa15.16■□□□□ 0.02
BRPF1-208ENST00000497565 TIMP1P01033 207 aa15.16■□□□□ 0.02
BRPF1-208ENST00000497565 EDNRBP24530 442 aa15.16■□□□□ 0.02
BRPF1-208ENST00000497565 CPT1AP50416 773 aa15.16■□□□□ 0.02
BRPF1-208ENST00000497565 FAAP100Q0VG06 881 aa15.16■□□□□ 0.02
BRPF1-208ENST00000497565 EEPD1Q7L9B9 569 aa15.16■□□□□ 0.02
BRPF1-208ENST00000497565 SH3RF1Q7Z6J0 888 aa15.16■□□□□ 0.02
BRPF1-208ENST00000497565 FBXO16Q8IX29 292 aaPredicted RBP15.16■□□□□ 0.02
BRPF1-208ENST00000497565 NSUN6Q8TEA1 469 aaKnown RBP15.16■□□□□ 0.02
BRPF1-208ENST00000497565 SCFD2Q8WU76 684 aa15.16■□□□□ 0.02
BRPF1-208ENST00000497565 IWS1Q96ST2 819 aa15.16■□□□□ 0.02
BRPF1-208ENST00000497565 AMNQ9BXJ7 453 aa15.16■□□□□ 0.02
BRPF1-208ENST00000497565 WDR11Q9BZH6 1224 aa15.16■□□□□ 0.02
BRPF1-208ENST00000497565 IL25Q9H293 177 aa15.16■□□□□ 0.02
BRPF1-208ENST00000497565 POLR3EQ9NVU0 708 aa15.16■□□□□ 0.02
BRPF1-208ENST00000497565 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.15■□□□□ 0.02
BRPF1-208ENST00000497565 PALM3A6NDB9 673 aaPredicted RBP15.15■□□□□ 0.02
BRPF1-208ENST00000497565 KLRF2D3W0D1 207 aa15.15■□□□□ 0.02
BRPF1-208ENST00000497565 IFIT3O14879 490 aaKnown RBP15.15■□□□□ 0.02
BRPF1-208ENST00000497565 PTH1RQ03431 593 aa15.15■□□□□ 0.02
BRPF1-208ENST00000497565 FPGSQ05932 587 aa15.15■□□□□ 0.02
BRPF1-208ENST00000497565 QRICH1Q2TAL8 776 aa15.15■□□□□ 0.02
BRPF1-208ENST00000497565 USH1GQ495M9 461 aa15.15■□□□□ 0.02
BRPF1-208ENST00000497565 SLC30A10Q6XR72 485 aa15.15■□□□□ 0.02
BRPF1-208ENST00000497565 TMTC2Q8N394 836 aa15.15■□□□□ 0.02
BRPF1-208ENST00000497565 SLC43A3Q8NBI5 491 aa15.15■□□□□ 0.02
BRPF1-208ENST00000497565 JMJD4Q9H9V9 463 aa15.15■□□□□ 0.02
BRPF1-208ENST00000497565 PDGFCQ9NRA1 345 aa15.15■□□□□ 0.02
BRPF1-208ENST00000497565 TBX21Q9UL17 535 aa15.15■□□□□ 0.02
BRPF1-208ENST00000497565 E7EWF7 191 aa15.14■□□□□ 0.01
BRPF1-208ENST00000497565 TTLL4Q14679 1199 aa15.14■□□□□ 0.01
BRPF1-208ENST00000497565 WTAPQ15007 396 aa15.14■□□□□ 0.01
BRPF1-208ENST00000497565 PPP2R5BQ15173 497 aa15.14■□□□□ 0.01
BRPF1-208ENST00000497565 MFSD5Q6N075 450 aa15.14■□□□□ 0.01
BRPF1-208ENST00000497565 CYB5R4Q7L1T6 521 aa15.14■□□□□ 0.01
BRPF1-208ENST00000497565 CENPQQ7L2Z9 268 aaPredicted RBP15.14■□□□□ 0.01
BRPF1-208ENST00000497565 CATIPQ7Z7H3 387 aa15.14■□□□□ 0.01
BRPF1-208ENST00000497565 FAM126BQ8IXS8 530 aa15.14■□□□□ 0.01
BRPF1-208ENST00000497565 DEFB123Q8N688 67 aa15.14■□□□□ 0.01
BRPF1-208ENST00000497565 MTMR8Q96EF0 704 aa15.14■□□□□ 0.01
BRPF1-208ENST00000497565 MAP3K14Q99558 947 aa15.14■□□□□ 0.01
BRPF1-208ENST00000497565 GPHNQ9NQX3 736 aaPredicted RBP15.14■□□□□ 0.01
BRPF1-208ENST00000497565 LTBP2Q14767 1821 aa15.13■□□□□ 0.01
BRPF1-208ENST00000497565 ZBTB5O15062 677 aa15.13■□□□□ 0.01
BRPF1-208ENST00000497565 SMAD3P84022 425 aaKnown RBP15.13■□□□□ 0.01
BRPF1-208ENST00000497565 BEX3Q00994 111 aa15.13■□□□□ 0.01
BRPF1-208ENST00000497565 GHRHRQ02643 423 aa15.13■□□□□ 0.01
BRPF1-208ENST00000497565 PPIGQ13427 754 aaKnown RBP eCLIP15.13■□□□□ 0.01
BRPF1-208ENST00000497565 ITGA7Q13683 1181 aa15.13■□□□□ 0.01
BRPF1-208ENST00000497565 SHHQ15465 462 aa15.13■□□□□ 0.01
BRPF1-208ENST00000497565 CXCL17Q6UXB2 119 aa15.13■□□□□ 0.01
BRPF1-208ENST00000497565 TMEM199Q8N511 208 aa15.13■□□□□ 0.01
BRPF1-208ENST00000497565 PURBQ96QR8 312 aaKnown RBP15.13■□□□□ 0.01
BRPF1-208ENST00000497565 VAT1LQ9HCJ6 419 aa15.13■□□□□ 0.01
BRPF1-208ENST00000497565 MAD2L2Q9UI95 211 aa15.13■□□□□ 0.01
BRPF1-208ENST00000497565 CD4P01730 458 aa15.12■□□□□ 0.01
BRPF1-208ENST00000497565 SUPT20HL2P0C7V6 817 aa15.12■□□□□ 0.01
BRPF1-208ENST00000497565 SMARCA1P28370 1054 aa15.12■□□□□ 0.01
BRPF1-208ENST00000497565 GRM4Q14833 912 aa15.12■□□□□ 0.01
BRPF1-208ENST00000497565 STXBP2Q15833 593 aa15.12■□□□□ 0.01
BRPF1-208ENST00000497565 OR6J1Q8NGC5 347 aa15.12■□□□□ 0.01
BRPF1-208ENST00000497565 SYTL5Q8TDW5 730 aaPredicted RBP15.12■□□□□ 0.01
BRPF1-208ENST00000497565 RMDN3Q96TC7 470 aa15.12■□□□□ 0.01
BRPF1-208ENST00000497565 CPVLQ9H3G5 476 aa15.12■□□□□ 0.01
BRPF1-208ENST00000497565 RIOX1Q9H6W3 641 aa15.12■□□□□ 0.01
BRPF1-208ENST00000497565 RBM8AQ9Y5S9 174 aaKnown RBP15.12■□□□□ 0.01
BRPF1-208ENST00000497565 A6NJR5 290 aa15.11■□□□□ 0.01
BRPF1-208ENST00000497565 EIF3JO75822 258 aaKnown RBP15.11■□□□□ 0.01
BRPF1-208ENST00000497565 TXNP10599 105 aaKnown RBP15.11■□□□□ 0.01
BRPF1-208ENST00000497565 ITGB8P26012 769 aa15.11■□□□□ 0.01
BRPF1-208ENST00000497565 KIF5BP33176 963 aa15.11■□□□□ 0.01
BRPF1-208ENST00000497565 IRX5P78411 483 aaPredicted RBP15.11■□□□□ 0.01
BRPF1-208ENST00000497565 TROAPQ12815 778 aa15.11■□□□□ 0.01
BRPF1-208ENST00000497565 BMP2KLQ5H9B9 411 aa15.11■□□□□ 0.01
BRPF1-208ENST00000497565 TMEM67Q5HYA8 995 aa15.11■□□□□ 0.01
BRPF1-208ENST00000497565 ARHGEF16Q5VV41 709 aa15.11■□□□□ 0.01
BRPF1-208ENST00000497565 KCNV1Q6PIU1 500 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms