RNA–Protein interactions for RNA: ENST00000497022.1

VPS26A-208, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-208ENST00000497022 CCDC9Q9Y3X0 531 aaKnown RBP5.53□□□□□ -1.52
VPS26A-208ENST00000497022 FHOD1Q9Y613 1164 aa5.53□□□□□ -1.52
VPS26A-208ENST00000497022 SLC12A7Q9Y666 1083 aa5.53□□□□□ -1.52
VPS26A-208ENST00000497022 H0Y8X5 98 aa5.52□□□□□ -1.53
VPS26A-208ENST00000497022 CBFA2T2O43439 604 aa5.52□□□□□ -1.53
VPS26A-208ENST00000497022 FBLN1P23142 703 aa5.52□□□□□ -1.53
VPS26A-208ENST00000497022 ZNF200P98182 395 aaPredicted RBP5.52□□□□□ -1.53
VPS26A-208ENST00000497022 TCEAL1Q15170 157 aa5.52□□□□□ -1.53
VPS26A-208ENST00000497022 GNPTABQ3T906 1256 aa5.52□□□□□ -1.53
VPS26A-208ENST00000497022 SAPCD2Q86UD0 394 aa5.52□□□□□ -1.53
VPS26A-208ENST00000497022 FERMT3Q86UX7 667 aa5.52□□□□□ -1.53
VPS26A-208ENST00000497022 FIBCD1Q8N539 461 aa5.52□□□□□ -1.53
VPS26A-208ENST00000497022 PHAXQ9H814 394 aaKnown RBP5.52□□□□□ -1.53
VPS26A-208ENST00000497022 SUSD2Q9UGT4 822 aa5.52□□□□□ -1.53
VPS26A-208ENST00000497022 A0A087WZG4 1122 aa5.51□□□□□ -1.53
VPS26A-208ENST00000497022 SRGAP3O43295 1099 aa5.51□□□□□ -1.53
VPS26A-208ENST00000497022 ITGB3P05106 788 aa5.51□□□□□ -1.53
VPS26A-208ENST00000497022 GSTM1P09488 218 aa5.51□□□□□ -1.53
VPS26A-208ENST00000497022 ITGA4P13612 1032 aa5.51□□□□□ -1.53
VPS26A-208ENST00000497022 NOP2P46087 812 aaKnown RBP5.51□□□□□ -1.53
VPS26A-208ENST00000497022 HTRA3P83110 453 aa5.51□□□□□ -1.53
VPS26A-208ENST00000497022 PPP2R5EQ16537 467 aa5.51□□□□□ -1.53
VPS26A-208ENST00000497022 TTC9BQ8N6N2 239 aa5.51□□□□□ -1.53
VPS26A-208ENST00000497022 CPLX3Q8WVH0 158 aa5.51□□□□□ -1.53
VPS26A-208ENST00000497022 HAUS7Q99871 368 aa5.51□□□□□ -1.53
VPS26A-208ENST00000497022 SPATA25Q9BR10 227 aa5.51□□□□□ -1.53
VPS26A-208ENST00000497022 C1QTNF3Q9BXJ4 246 aa5.51□□□□□ -1.53
VPS26A-208ENST00000497022 RNF38Q9H0F5 515 aa5.51□□□□□ -1.53
VPS26A-208ENST00000497022 CCSER2Q9H7U1 834 aa5.51□□□□□ -1.53
VPS26A-208ENST00000497022 IMPACTQ9P2X3 320 aa5.51□□□□□ -1.53
VPS26A-208ENST00000497022 PCDHB10Q9UN67 800 aa5.51□□□□□ -1.53
VPS26A-208ENST00000497022 PMF1-BGLAPU3KQ54 211 aa5.51□□□□□ -1.53
VPS26A-208ENST00000497022 PLA2G1BP04054 148 aaKnown RBP5.5□□□□□ -1.53
VPS26A-208ENST00000497022 CASP7P55210 303 aa5.5□□□□□ -1.53
VPS26A-208ENST00000497022 SLC7A5Q01650 507 aa5.5□□□□□ -1.53
VPS26A-208ENST00000497022 CPZQ66K79 652 aa5.5□□□□□ -1.53
VPS26A-208ENST00000497022 SLC16A11Q8NCK7 471 aa5.5□□□□□ -1.53
VPS26A-208ENST00000497022 FCRL3Q96P31 734 aaPredicted RBP5.5□□□□□ -1.53
VPS26A-208ENST00000497022 KLHL25Q9H0H3 589 aa5.5□□□□□ -1.53
VPS26A-208ENST00000497022 NOL6Q9H6R4 1146 aaKnown RBP5.5□□□□□ -1.53
VPS26A-208ENST00000497022 DIS3Q9Y2L1 958 aaKnown RBP5.5□□□□□ -1.53
VPS26A-208ENST00000497022 SF3B6Q9Y3B4 125 aaKnown RBP5.5□□□□□ -1.53
VPS26A-208ENST00000497022 NOBOXO60393 691 aa5.49□□□□□ -1.53
VPS26A-208ENST00000497022 CYBBP04839 570 aa5.49□□□□□ -1.53
VPS26A-208ENST00000497022 ATF4P18848 351 aaPredicted RBP5.49□□□□□ -1.53
VPS26A-208ENST00000497022 FOXO4P98177 505 aa5.49□□□□□ -1.53
VPS26A-208ENST00000497022 POU4F1Q01851 419 aa5.49□□□□□ -1.53
VPS26A-208ENST00000497022 HLA-DQA1Q5Y7H0 255 aa5.49□□□□□ -1.53
VPS26A-208ENST00000497022 HEATR6Q6AI08 1181 aaKnown RBP5.49□□□□□ -1.53
VPS26A-208ENST00000497022 PAQR3Q6TCH7 311 aa5.49□□□□□ -1.53
VPS26A-208ENST00000497022 FAM169BQ8N8A8 192 aa5.49□□□□□ -1.53
VPS26A-208ENST00000497022 KLHL6Q8WZ60 621 aa5.49□□□□□ -1.53
VPS26A-208ENST00000497022 SORCS2Q96PQ0 1159 aa5.49□□□□□ -1.53
VPS26A-208ENST00000497022 JMJD8Q96S16 334 aa5.49□□□□□ -1.53
VPS26A-208ENST00000497022 RBM15Q96T37 977 aaKnown RBP eCLIP5.49□□□□□ -1.53
VPS26A-208ENST00000497022 LNPKQ9C0E8 428 aa5.49□□□□□ -1.53
VPS26A-208ENST00000497022 WHRNQ9P202 907 aa5.49□□□□□ -1.53
VPS26A-208ENST00000497022 STRIP2Q9ULQ0 834 aa5.49□□□□□ -1.53
VPS26A-208ENST00000497022 FGF10O15520 208 aaPredicted RBP5.48□□□□□ -1.53
VPS26A-208ENST00000497022 EPHX1P07099 455 aa5.48□□□□□ -1.53
VPS26A-208ENST00000497022 ERCC5P28715 1186 aaPredicted RBP5.48□□□□□ -1.53
VPS26A-208ENST00000497022 CNR2P34972 360 aa5.48□□□□□ -1.53
VPS26A-208ENST00000497022 GJA9P57773 515 aa5.48□□□□□ -1.53
VPS26A-208ENST00000497022 PPP2R5DQ14738 602 aa5.48□□□□□ -1.53
VPS26A-208ENST00000497022 NAT16Q8N8M0 369 aa5.48□□□□□ -1.53
VPS26A-208ENST00000497022 ADCY4Q8NFM4 1077 aa5.48□□□□□ -1.53
VPS26A-208ENST00000497022 FGD4Q96M96 766 aa5.48□□□□□ -1.53
VPS26A-208ENST00000497022 ZDHHC15Q96MV8 337 aa5.48□□□□□ -1.53
VPS26A-208ENST00000497022 SAMD11Q96NU1 681 aa5.48□□□□□ -1.53
VPS26A-208ENST00000497022 KRTAP3-1Q9BYR8 98 aa5.48□□□□□ -1.53
VPS26A-208ENST00000497022 GBP3Q9H0R5 595 aa5.48□□□□□ -1.53
VPS26A-208ENST00000497022 FAN1Q9Y2M0 1017 aa5.48□□□□□ -1.53
VPS26A-208ENST00000497022 A0A1B0GTL3 188 aa5.47□□□□□ -1.53
VPS26A-208ENST00000497022 A0A1W2PQ27 194 aa5.47□□□□□ -1.53
VPS26A-208ENST00000497022 A0A1W2PQ64 194 aa5.47□□□□□ -1.53
VPS26A-208ENST00000497022 A0A1W2PQC6 194 aa5.47□□□□□ -1.53
VPS26A-208ENST00000497022 A0A1W2PQD8 194 aa5.47□□□□□ -1.53
VPS26A-208ENST00000497022 PPM1BO75688 479 aa5.47□□□□□ -1.53
VPS26A-208ENST00000497022 CD3EP07766 207 aa5.47□□□□□ -1.53
VPS26A-208ENST00000497022 DBHP09172 617 aa5.47□□□□□ -1.53
VPS26A-208ENST00000497022 IFNGR1P15260 489 aa5.47□□□□□ -1.53
VPS26A-208ENST00000497022 MVKQ03426 396 aa5.47□□□□□ -1.53
VPS26A-208ENST00000497022 DLX2Q07687 328 aaPredicted RBP5.47□□□□□ -1.53
VPS26A-208ENST00000497022 CYP2R1Q6VVX0 501 aa5.47□□□□□ -1.53
VPS26A-208ENST00000497022 ADAT2Q7Z6V5 191 aaKnown RBP5.47□□□□□ -1.53
VPS26A-208ENST00000497022 ADGRG2Q8IZP9 1017 aa5.47□□□□□ -1.53
VPS26A-208ENST00000497022 CARFQ8N187 725 aa5.47□□□□□ -1.53
VPS26A-208ENST00000497022 ZNF428Q96B54 188 aa5.47□□□□□ -1.53
VPS26A-208ENST00000497022 ANAPC16Q96DE5 110 aa5.47□□□□□ -1.53
VPS26A-208ENST00000497022 DUSP10Q9Y6W6 482 aa5.47□□□□□ -1.53
VPS26A-208ENST00000497022 OVOL3O00110 214 aa5.46□□□□□ -1.54
VPS26A-208ENST00000497022 VAMP4O75379 141 aa5.46□□□□□ -1.54
VPS26A-208ENST00000497022 FSHBP01225 129 aa5.46□□□□□ -1.54
VPS26A-208ENST00000497022 ATF2P15336 505 aa5.46□□□□□ -1.54
VPS26A-208ENST00000497022 TCF3P15923 654 aa5.46□□□□□ -1.54
VPS26A-208ENST00000497022 ZNF20P17024 532 aa5.46□□□□□ -1.54
VPS26A-208ENST00000497022 KRTAP1-1Q07627 177 aa5.46□□□□□ -1.54
VPS26A-208ENST00000497022 KIAA1211LQ6NV74 962 aa5.46□□□□□ -1.54
VPS26A-208ENST00000497022 VHLLQ6RSH7 139 aa5.46□□□□□ -1.54
VPS26A-208ENST00000497022 JAMLQ86YT9 394 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms