RNA–Protein interactions for RNA: ENST00000497015.5

SRSF4-205, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 2

Gene SRSF4, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-205ENST00000497015 ALDH8A1Q9H2A2 487 aaPredicted RBP11.71□□□□□ -0.53
SRSF4-205ENST00000497015 SPC25Q9HBM1 224 aa11.71□□□□□ -0.53
SRSF4-205ENST00000497015 RAVER2Q9HCJ3 691 aaKnown RBP11.71□□□□□ -0.53
SRSF4-205ENST00000497015 SMARCA5O60264 1052 aaPredicted RBP11.7□□□□□ -0.54
SRSF4-205ENST00000497015 CHGBP05060 677 aa11.7□□□□□ -0.54
SRSF4-205ENST00000497015 COPB2P35606 906 aa11.7□□□□□ -0.54
SRSF4-205ENST00000497015 FSCN1Q16658 493 aaKnown RBP11.7□□□□□ -0.54
SRSF4-205ENST00000497015 LEXMQ3ZCV2 418 aa11.7□□□□□ -0.54
SRSF4-205ENST00000497015 C12orf60Q5U649 245 aa11.7□□□□□ -0.54
SRSF4-205ENST00000497015 TAPT1Q6NXT6 567 aa11.7□□□□□ -0.54
SRSF4-205ENST00000497015 EFCAB3Q8N7B9 438 aa11.7□□□□□ -0.54
SRSF4-205ENST00000497015 PHOSPHO2Q8TCD6 241 aa11.7□□□□□ -0.54
SRSF4-205ENST00000497015 UBE2ZQ9H832 354 aaPredicted RBP11.7□□□□□ -0.54
SRSF4-205ENST00000497015 SUGCTQ9HAC7 445 aa11.7□□□□□ -0.54
SRSF4-205ENST00000497015 PAG1Q9NWQ8 432 aa11.7□□□□□ -0.54
SRSF4-205ENST00000497015 SWAP70Q9UH65 585 aa11.7□□□□□ -0.54
SRSF4-205ENST00000497015 NAV1Q8NEY1 1877 aa11.7□□□□□ -0.54
SRSF4-205ENST00000497015 USP34Q70CQ2 3546 aa11.69□□□□□ -0.54
SRSF4-205ENST00000497015 SALL3Q9BXA9 1300 aa11.69□□□□□ -0.54
SRSF4-205ENST00000497015 ZNF532Q9HCE3 1301 aa11.69□□□□□ -0.54
SRSF4-205ENST00000497015 MYH8P13535 1937 aa11.69□□□□□ -0.54
SRSF4-205ENST00000497015 GRXCR2A6NFK2 248 aa11.69□□□□□ -0.54
SRSF4-205ENST00000497015 CABYRO75952 493 aa11.69□□□□□ -0.54
SRSF4-205ENST00000497015 PDE6AP16499 860 aa11.69□□□□□ -0.54
SRSF4-205ENST00000497015 TCTN1Q2MV58 587 aa11.69□□□□□ -0.54
SRSF4-205ENST00000497015 LRRFIP1Q32MZ4 808 aaKnown RBP11.69□□□□□ -0.54
SRSF4-205ENST00000497015 SLC9C2Q5TAH2 1124 aa11.69□□□□□ -0.54
SRSF4-205ENST00000497015 ZSCAN25Q6NSZ9 544 aa11.69□□□□□ -0.54
SRSF4-205ENST00000497015 TLK2Q86UE8 772 aa11.69□□□□□ -0.54
SRSF4-205ENST00000497015 FAM133AQ8N9E0 248 aa11.69□□□□□ -0.54
SRSF4-205ENST00000497015 GDPD5Q8WTR4 605 aa11.69□□□□□ -0.54
SRSF4-205ENST00000497015 CCDC17Q96LX7 622 aa11.69□□□□□ -0.54
SRSF4-205ENST00000497015 SLF1Q9BQI6 1058 aa11.69□□□□□ -0.54
SRSF4-205ENST00000497015 CRNKL1Q9BZJ0 848 aaKnown RBP11.69□□□□□ -0.54
SRSF4-205ENST00000497015 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.69□□□□□ -0.54
SRSF4-205ENST00000497015 SH2D4AQ9H788 454 aa11.69□□□□□ -0.54
SRSF4-205ENST00000497015 ARMT1Q9H993 441 aa11.69□□□□□ -0.54
SRSF4-205ENST00000497015 KANSL2Q9H9L4 492 aa11.69□□□□□ -0.54
SRSF4-205ENST00000497015 SCN5AQ14524 2016 aa11.69□□□□□ -0.54
SRSF4-205ENST00000497015 MCM3APO60318 1980 aa11.68□□□□□ -0.54
SRSF4-205ENST00000497015 USP17L12C9JPN9 530 aa11.68□□□□□ -0.54
SRSF4-205ENST00000497015 USP17L21D6R901 530 aa11.68□□□□□ -0.54
SRSF4-205ENST00000497015 F5H6K3 240 aa11.68□□□□□ -0.54
SRSF4-205ENST00000497015 IQCF3P0C7M6 154 aa11.68□□□□□ -0.54
SRSF4-205ENST00000497015 MX1P20591 662 aa11.68□□□□□ -0.54
SRSF4-205ENST00000497015 KLRC3Q07444 240 aa11.68□□□□□ -0.54
SRSF4-205ENST00000497015 ANKRD45Q5TZF3 282 aa11.68□□□□□ -0.54
SRSF4-205ENST00000497015 HFE2Q6ZVN8 426 aa11.68□□□□□ -0.54
SRSF4-205ENST00000497015 C16orf86Q6ZW13 317 aa11.68□□□□□ -0.54
SRSF4-205ENST00000497015 ANKRD35Q8N283 1001 aa11.68□□□□□ -0.54
SRSF4-205ENST00000497015 PRPF38AQ8NAV1 312 aaKnown RBP11.68□□□□□ -0.54
SRSF4-205ENST00000497015 SLC9A7Q96T83 725 aa11.68□□□□□ -0.54
SRSF4-205ENST00000497015 DNAJC2Q99543 621 aaKnown RBP11.68□□□□□ -0.54
SRSF4-205ENST00000497015 BOLA2Q9H3K6 86 aa11.68□□□□□ -0.54
SRSF4-205ENST00000497015 LMCD1Q9NZU5 365 aa11.68□□□□□ -0.54
SRSF4-205ENST00000497015 GOLIM4O00461 696 aa11.67□□□□□ -0.54
SRSF4-205ENST00000497015 RAD21O60216 631 aa11.67□□□□□ -0.54
SRSF4-205ENST00000497015 PFKMP08237 780 aa11.67□□□□□ -0.54
SRSF4-205ENST00000497015 ALADP13716 330 aa11.67□□□□□ -0.54
SRSF4-205ENST00000497015 KCNA5P22460 613 aa11.67□□□□□ -0.54
SRSF4-205ENST00000497015 UBE3CQ15386 1083 aa11.67□□□□□ -0.54
SRSF4-205ENST00000497015 NOL8Q76FK4 1167 aaKnown RBP11.67□□□□□ -0.54
SRSF4-205ENST00000497015 PURBQ96QR8 312 aaKnown RBP11.67□□□□□ -0.54
SRSF4-205ENST00000497015 KCNH6Q9H252 994 aa11.67□□□□□ -0.54
SRSF4-205ENST00000497015 SLC38A10Q9HBR0 1119 aa11.67□□□□□ -0.54
SRSF4-205ENST00000497015 GOPCQ9HD26 462 aa11.67□□□□□ -0.54
SRSF4-205ENST00000497015 TNKSO95271 1327 aa11.66□□□□□ -0.54
SRSF4-205ENST00000497015 NDUFB10O96000 172 aa11.66□□□□□ -0.54
SRSF4-205ENST00000497015 IGHDP01880 384 aa11.66□□□□□ -0.54
SRSF4-205ENST00000497015 ZFYP08048 801 aaPredicted RBP11.66□□□□□ -0.54
SRSF4-205ENST00000497015 SSTR3P32745 418 aaPredicted RBP11.66□□□□□ -0.54
SRSF4-205ENST00000497015 NUCB1Q02818 461 aa11.66□□□□□ -0.54
SRSF4-205ENST00000497015 IER5LQ5T953 404 aa11.66□□□□□ -0.54
SRSF4-205ENST00000497015 PTCRAQ6ISU1 281 aaPredicted RBP11.66□□□□□ -0.54
SRSF4-205ENST00000497015 EEPD1Q7L9B9 569 aa11.66□□□□□ -0.54
SRSF4-205ENST00000497015 KBTBD3Q8NAB2 608 aa11.66□□□□□ -0.54
SRSF4-205ENST00000497015 PI4K2BQ8TCG2 481 aa11.66□□□□□ -0.54
SRSF4-205ENST00000497015 NEK9Q8TD19 979 aa11.66□□□□□ -0.54
SRSF4-205ENST00000497015 SEZ6LQ9BYH1 1024 aa11.66□□□□□ -0.54
SRSF4-205ENST00000497015 OSBPL3Q9H4L5 887 aa11.66□□□□□ -0.54
SRSF4-205ENST00000497015 Q9Y3F1 56 aa11.66□□□□□ -0.54
SRSF4-205ENST00000497015 TRIOO75962 3097 aa11.66□□□□□ -0.54
SRSF4-205ENST00000497015 ZNF536O15090 1300 aa11.65□□□□□ -0.54
SRSF4-205ENST00000497015 CFAP54Q96N23 3096 aa11.65□□□□□ -0.54
SRSF4-205ENST00000497015 PTPRSQ13332 1948 aa11.65□□□□□ -0.54
SRSF4-205ENST00000497015 BAZ2AQ9UIF9 1905 aaKnown RBP11.65□□□□□ -0.54
SRSF4-205ENST00000497015 C19orf67A6NJJ6 358 aa11.65□□□□□ -0.54
SRSF4-205ENST00000497015 DCXO43602 365 aa11.65□□□□□ -0.54
SRSF4-205ENST00000497015 ZBED4O75132 1171 aa11.65□□□□□ -0.54
SRSF4-205ENST00000497015 CENPBP07199 599 aaPredicted RBP11.65□□□□□ -0.54
SRSF4-205ENST00000497015 ADD2P35612 726 aa11.65□□□□□ -0.54
SRSF4-205ENST00000497015 MLLT3P42568 568 aaPredicted RBP11.65□□□□□ -0.54
SRSF4-205ENST00000497015 ERVK-21P61565 698 aa11.65□□□□□ -0.54
SRSF4-205ENST00000497015 DEFB103AP81534 67 aa11.65□□□□□ -0.54
SRSF4-205ENST00000497015 PURAQ00577 322 aaKnown RBP11.65□□□□□ -0.54
SRSF4-205ENST00000497015 IQSEC1Q6DN90 963 aa11.65□□□□□ -0.54
SRSF4-205ENST00000497015 CTR9Q6PD62 1173 aa11.65□□□□□ -0.54
SRSF4-205ENST00000497015 CHD1LQ86WJ1 897 aa11.65□□□□□ -0.54
SRSF4-205ENST00000497015 CHST13Q8NET6 341 aa11.65□□□□□ -0.54
SRSF4-205ENST00000497015 PRSS33Q8NF86 280 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms