RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 BAZ1AQ9NRL2 1556 aaPredicted RBP3.6□□□□□ -1.83
SNRNP48-202ENST00000496946 CBX7O95931 251 aa3.6□□□□□ -1.83
SNRNP48-202ENST00000496946 EOMESO95936 686 aa3.6□□□□□ -1.83
SNRNP48-202ENST00000496946 MSL3P1P0C860 447 aa3.6□□□□□ -1.83
SNRNP48-202ENST00000496946 PLCG1P19174 1290 aa3.6□□□□□ -1.83
SNRNP48-202ENST00000496946 GARTP22102 1010 aa3.6□□□□□ -1.83
SNRNP48-202ENST00000496946 SH3BGRP55822 239 aaPredicted RBP3.6□□□□□ -1.83
SNRNP48-202ENST00000496946 GSCP56915 257 aaPredicted RBP3.6□□□□□ -1.83
SNRNP48-202ENST00000496946 PRPF4BQ13523 1007 aaKnown RBP3.6□□□□□ -1.83
SNRNP48-202ENST00000496946 INF2Q27J81 1249 aa3.6□□□□□ -1.83
SNRNP48-202ENST00000496946 ARTNQ5T4W7 220 aa3.6□□□□□ -1.83
SNRNP48-202ENST00000496946 AP1ARQ63HQ0 302 aa3.6□□□□□ -1.83
SNRNP48-202ENST00000496946 CYFIP1Q7L576 1253 aa3.6□□□□□ -1.83
SNRNP48-202ENST00000496946 REC114Q7Z4M0 266 aa3.6□□□□□ -1.83
SNRNP48-202ENST00000496946 FERMT3Q86UX7 667 aa3.6□□□□□ -1.83
SNRNP48-202ENST00000496946 ABI1Q8IZP0 508 aa3.6□□□□□ -1.83
SNRNP48-202ENST00000496946 MYOCDQ8IZQ8 938 aa3.6□□□□□ -1.83
SNRNP48-202ENST00000496946 MIGA1Q8NAN2 632 aa3.6□□□□□ -1.83
SNRNP48-202ENST00000496946 UHMK1Q8TAS1 419 aaKnown RBP3.6□□□□□ -1.83
SNRNP48-202ENST00000496946 DHX36Q9H2U1 1008 aaKnown RBP3.6□□□□□ -1.83
SNRNP48-202ENST00000496946 ACBD3Q9H3P7 528 aa3.6□□□□□ -1.83
SNRNP48-202ENST00000496946 CD248Q9HCU0 757 aa3.6□□□□□ -1.83
SNRNP48-202ENST00000496946 CASS4Q9NQ75 786 aa3.6□□□□□ -1.83
SNRNP48-202ENST00000496946 KRT82Q9NSB4 513 aa3.6□□□□□ -1.83
SNRNP48-202ENST00000496946 COMMD8Q9NX08 183 aa3.6□□□□□ -1.83
SNRNP48-202ENST00000496946 TRMT1Q9NXH9 659 aaKnown RBP3.6□□□□□ -1.83
SNRNP48-202ENST00000496946 HOXC10Q9NYD6 342 aa3.6□□□□□ -1.83
SNRNP48-202ENST00000496946 REV1Q9UBZ9 1251 aa3.6□□□□□ -1.83
SNRNP48-202ENST00000496946 IP6K2Q9UHH9 426 aa3.6□□□□□ -1.83
SNRNP48-202ENST00000496946 RSPH14Q9UHP6 348 aa3.6□□□□□ -1.83
SNRNP48-202ENST00000496946 BLOC1S6Q9UL45 172 aa3.6□□□□□ -1.83
SNRNP48-202ENST00000496946 INTUQ9ULD6 942 aa3.6□□□□□ -1.83
SNRNP48-202ENST00000496946 RNF112Q9ULX5 631 aa3.6□□□□□ -1.83
SNRNP48-202ENST00000496946 SLC45A1Q9Y2W3 748 aa3.6□□□□□ -1.83
SNRNP48-202ENST00000496946 TMEM110-MUSTN1A8MSY1 372 aa3.59□□□□□ -1.83
SNRNP48-202ENST00000496946 CDKL5O76039 1030 aa3.59□□□□□ -1.83
SNRNP48-202ENST00000496946 FGAP02671 866 aa3.59□□□□□ -1.83
SNRNP48-202ENST00000496946 RBP3P10745 1247 aa3.59□□□□□ -1.83
SNRNP48-202ENST00000496946 COL6A1P12109 1028 aa3.59□□□□□ -1.83
SNRNP48-202ENST00000496946 IMPDH2P12268 514 aa3.59□□□□□ -1.83
SNRNP48-202ENST00000496946 AMPD3Q01432 767 aa3.59□□□□□ -1.83
SNRNP48-202ENST00000496946 ADCY2Q08462 1091 aa3.59□□□□□ -1.83
SNRNP48-202ENST00000496946 SEPT2Q15019 361 aa3.59□□□□□ -1.83
SNRNP48-202ENST00000496946 ZYXQ15942 572 aaKnown RBP3.59□□□□□ -1.83
SNRNP48-202ENST00000496946 NFE2L2Q16236 605 aa3.59□□□□□ -1.83
SNRNP48-202ENST00000496946 NKPD1Q17RQ9 610 aa3.59□□□□□ -1.83
SNRNP48-202ENST00000496946 FBXW10Q5XX13 1052 aa3.59□□□□□ -1.83
SNRNP48-202ENST00000496946 SYNE3Q6ZMZ3 975 aa3.59□□□□□ -1.83
SNRNP48-202ENST00000496946 ERMP1Q7Z2K6 904 aa3.59□□□□□ -1.83
SNRNP48-202ENST00000496946 TP53INP2Q8IXH6 220 aa3.59□□□□□ -1.83
SNRNP48-202ENST00000496946 RAVER1Q8IY67 606 aaKnown RBP3.59□□□□□ -1.83
SNRNP48-202ENST00000496946 STK11IPQ8N1F8 1099 aa3.59□□□□□ -1.83
SNRNP48-202ENST00000496946 CCDC89Q8N998 374 aa3.59□□□□□ -1.83
SNRNP48-202ENST00000496946 GIMAP1Q8WWP7 306 aa3.59□□□□□ -1.83
SNRNP48-202ENST00000496946 ATRIPQ8WXE1 791 aa3.59□□□□□ -1.83
SNRNP48-202ENST00000496946 GATAD2BQ8WXI9 593 aa3.59□□□□□ -1.83
SNRNP48-202ENST00000496946 EAF1Q96JC9 268 aaPredicted RBP3.59□□□□□ -1.83
SNRNP48-202ENST00000496946 UNC45AQ9H3U1 944 aa3.59□□□□□ -1.83
SNRNP48-202ENST00000496946 PPCSQ9HAB8 311 aa3.59□□□□□ -1.83
SNRNP48-202ENST00000496946 IQSEC2Q5JU85 1478 aa3.59□□□□□ -1.83
SNRNP48-202ENST00000496946 HECW2Q9P2P5 1572 aa3.59□□□□□ -1.83
SNRNP48-202ENST00000496946 SHISA3A0PJX4 238 aa3.59□□□□□ -1.83
SNRNP48-202ENST00000496946 VAMP4O75379 141 aa3.59□□□□□ -1.83
SNRNP48-202ENST00000496946 KRT38O76015 456 aa3.59□□□□□ -1.83
SNRNP48-202ENST00000496946 HTR3BO95264 441 aa3.59□□□□□ -1.83
SNRNP48-202ENST00000496946 ALDH1B1P30837 517 aa3.59□□□□□ -1.83
SNRNP48-202ENST00000496946 SLC7A5Q01650 507 aa3.59□□□□□ -1.83
SNRNP48-202ENST00000496946 CLCQ05315 142 aa3.59□□□□□ -1.83
SNRNP48-202ENST00000496946 APOBRQ0VD83 1088 aa3.59□□□□□ -1.83
SNRNP48-202ENST00000496946 MAP7Q14244 749 aa3.59□□□□□ -1.83
SNRNP48-202ENST00000496946 PDCD2Q16342 344 aaPredicted RBP3.59□□□□□ -1.83
SNRNP48-202ENST00000496946 MCTP2Q6DN12 878 aa3.59□□□□□ -1.83
SNRNP48-202ENST00000496946 LETMD1Q6P1Q0 360 aa3.59□□□□□ -1.83
SNRNP48-202ENST00000496946 OGFOD3Q6PK18 319 aa3.59□□□□□ -1.83
SNRNP48-202ENST00000496946 HS2ST1Q7LGA3 356 aa3.59□□□□□ -1.83
SNRNP48-202ENST00000496946 HDXQ7Z353 690 aa3.59□□□□□ -1.83
SNRNP48-202ENST00000496946 USP48Q86UV5 1035 aa3.59□□□□□ -1.83
SNRNP48-202ENST00000496946 RBM12BQ8IXT5 1001 aaKnown RBP3.59□□□□□ -1.83
SNRNP48-202ENST00000496946 SAMD14Q8IZD0 417 aaPredicted RBP3.59□□□□□ -1.83
SNRNP48-202ENST00000496946 TRIML1Q8N9V2 468 aa3.59□□□□□ -1.83
SNRNP48-202ENST00000496946 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.59□□□□□ -1.83
SNRNP48-202ENST00000496946 FRS2Q8WU20 508 aa3.59□□□□□ -1.83
SNRNP48-202ENST00000496946 LGR4Q9BXB1 951 aa3.59□□□□□ -1.83
SNRNP48-202ENST00000496946 KRTAP4-7Q9BYR0 210 aa3.59□□□□□ -1.83
SNRNP48-202ENST00000496946 ATP13A1Q9HD20 1204 aa3.59□□□□□ -1.83
SNRNP48-202ENST00000496946 GINM1Q9NU53 330 aa3.59□□□□□ -1.83
SNRNP48-202ENST00000496946 MKS1Q9NXB0 559 aa3.59□□□□□ -1.83
SNRNP48-202ENST00000496946 CPSF2Q9P2I0 782 aaKnown RBP3.59□□□□□ -1.83
SNRNP48-202ENST00000496946 HDAC9Q9UKV0 1011 aa3.59□□□□□ -1.83
SNRNP48-202ENST00000496946 PCDHB14Q9Y5E9 798 aa3.59□□□□□ -1.83
SNRNP48-202ENST00000496946 EID1Q9Y6B2 187 aa3.59□□□□□ -1.83
SNRNP48-202ENST00000496946 THOC2Q8NI27 1593 aaKnown RBP3.59□□□□□ -1.84
SNRNP48-202ENST00000496946 FSD2A1L4K1 749 aa3.58□□□□□ -1.84
SNRNP48-202ENST00000496946 BOLA2-SMG1P6H3BVE0 249 aa3.58□□□□□ -1.84
SNRNP48-202ENST00000496946 SLC27A2O14975 620 aa3.58□□□□□ -1.84
SNRNP48-202ENST00000496946 CILPO75339 1184 aa3.58□□□□□ -1.84
SNRNP48-202ENST00000496946 HOXD10P28358 340 aa3.58□□□□□ -1.84
SNRNP48-202ENST00000496946 ZNF76P36508 570 aa3.58□□□□□ -1.84
SNRNP48-202ENST00000496946 GNALP38405 381 aa3.58□□□□□ -1.84
SNRNP48-202ENST00000496946 PIK3CAP42336 1068 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms