RNA–Protein interactions for RNA: ENST00000496340.1

NEPRO-224, Transcript of nucleolus and neural progenitor protein, humanhuman

TSL 4

Gene NEPRO, Length 520 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEPRO-224ENST00000496340 PLEKHA8P1O95397 391 aa12.69□□□□□ -0.38
NEPRO-224ENST00000496340 EDNRBP24530 442 aa12.69□□□□□ -0.38
NEPRO-224ENST00000496340 RTP1P59025 263 aa12.69□□□□□ -0.38
NEPRO-224ENST00000496340 BEX3Q00994 111 aa12.69□□□□□ -0.38
NEPRO-224ENST00000496340 SNX17Q15036 470 aa12.69□□□□□ -0.38
NEPRO-224ENST00000496340 KCNA10Q16322 511 aa12.69□□□□□ -0.38
NEPRO-224ENST00000496340 TRIM60Q495X7 471 aa12.69□□□□□ -0.38
NEPRO-224ENST00000496340 ZNF654Q8IZM8 581 aa12.69□□□□□ -0.38
NEPRO-224ENST00000496340 SRBD1Q8N5C6 995 aaKnown RBP12.69□□□□□ -0.38
NEPRO-224ENST00000496340 ARRDC4Q8NCT1 418 aa12.69□□□□□ -0.38
NEPRO-224ENST00000496340 SYTL5Q8TDW5 730 aaPredicted RBP12.69□□□□□ -0.38
NEPRO-224ENST00000496340 PIBF1Q8WXW3 757 aa12.69□□□□□ -0.38
NEPRO-224ENST00000496340 UPF3AQ9H1J1 476 aaKnown RBP12.69□□□□□ -0.38
NEPRO-224ENST00000496340 BRPF3Q9ULD4 1205 aa12.69□□□□□ -0.38
NEPRO-224ENST00000496340 A0A1W2PQ45 241 aaPredicted RBP12.68□□□□□ -0.38
NEPRO-224ENST00000496340 A0A1W2PQY0 241 aa12.68□□□□□ -0.38
NEPRO-224ENST00000496340 ASB14A6NK59 587 aa12.68□□□□□ -0.38
NEPRO-224ENST00000496340 ITGB8P26012 769 aa12.68□□□□□ -0.38
NEPRO-224ENST00000496340 MCM5P33992 734 aa12.68□□□□□ -0.38
NEPRO-224ENST00000496340 ACLYP53396 1101 aa12.68□□□□□ -0.38
NEPRO-224ENST00000496340 GJA9P57773 515 aa12.68□□□□□ -0.38
NEPRO-224ENST00000496340 TSGA10IPQ3SY00 556 aa12.68□□□□□ -0.38
NEPRO-224ENST00000496340 FBXO11Q86XK2 927 aa12.68□□□□□ -0.38
NEPRO-224ENST00000496340 HOMER1Q86YM7 354 aa12.68□□□□□ -0.38
NEPRO-224ENST00000496340 RGS22Q8NE09 1264 aa12.68□□□□□ -0.38
NEPRO-224ENST00000496340 NUP133Q8WUM0 1156 aa12.68□□□□□ -0.38
NEPRO-224ENST00000496340 COPS5Q92905 334 aa12.68□□□□□ -0.38
NEPRO-224ENST00000496340 GDF15Q99988 308 aa12.68□□□□□ -0.38
NEPRO-224ENST00000496340 PPP4R2Q9NY27 417 aa12.68□□□□□ -0.38
NEPRO-224ENST00000496340 NR2E3Q9Y5X4 410 aa12.68□□□□□ -0.38
NEPRO-224ENST00000496340 hCG_1642624A0A1W2PR95 340 aa12.67□□□□□ -0.38
NEPRO-224ENST00000496340 TRIM43BA6NCK2 446 aa12.67□□□□□ -0.38
NEPRO-224ENST00000496340 ZBTB5O15062 677 aa12.67□□□□□ -0.38
NEPRO-224ENST00000496340 DHX16O60231 1041 aaKnown RBP12.67□□□□□ -0.38
NEPRO-224ENST00000496340 ARIH2O95376 493 aa12.67□□□□□ -0.38
NEPRO-224ENST00000496340 HOXA13P31271 388 aaPredicted RBP12.67□□□□□ -0.38
NEPRO-224ENST00000496340 MAGEA10P43363 369 aaPredicted RBP12.67□□□□□ -0.38
NEPRO-224ENST00000496340 NKX3-2P78367 333 aa12.67□□□□□ -0.38
NEPRO-224ENST00000496340 TNFAIP2Q03169 654 aa12.67□□□□□ -0.38
NEPRO-224ENST00000496340 TRIM43Q96BQ3 446 aaPredicted RBP12.67□□□□□ -0.38
NEPRO-224ENST00000496340 ZFP91Q96JP5 570 aaPredicted RBP12.67□□□□□ -0.38
NEPRO-224ENST00000496340 SNX14Q9Y5W7 946 aa12.67□□□□□ -0.38
NEPRO-224ENST00000496340 GRIN2DO15399 1336 aa12.66□□□□□ -0.38
NEPRO-224ENST00000496340 ABCB11O95342 1321 aa12.66□□□□□ -0.38
NEPRO-224ENST00000496340 RBM47A0AV96 593 aaKnown RBP12.66□□□□□ -0.38
NEPRO-224ENST00000496340 KBTBD13C9JR72 458 aa12.66□□□□□ -0.38
NEPRO-224ENST00000496340 SOX1O00570 391 aaPredicted RBP12.66□□□□□ -0.38
NEPRO-224ENST00000496340 DYNC1LI2O43237 492 aaPredicted RBP12.66□□□□□ -0.38
NEPRO-224ENST00000496340 RGS20O76081 388 aa12.66□□□□□ -0.38
NEPRO-224ENST00000496340 ASGR1P07306 291 aa12.66□□□□□ -0.38
NEPRO-224ENST00000496340 C6orf222P0C671 652 aaPredicted RBP12.66□□□□□ -0.38
NEPRO-224ENST00000496340 CST5P28325 142 aaPredicted RBP12.66□□□□□ -0.38
NEPRO-224ENST00000496340 HSPA4P34932 840 aa12.66□□□□□ -0.38
NEPRO-224ENST00000496340 FXR1P51114 621 aaKnown RBP eCLIP12.66□□□□□ -0.38
NEPRO-224ENST00000496340 HSD17B4P51659 736 aa12.66□□□□□ -0.38
NEPRO-224ENST00000496340 GHRHRQ02643 423 aa12.66□□□□□ -0.38
NEPRO-224ENST00000496340 TLE2Q04725 743 aa12.66□□□□□ -0.38
NEPRO-224ENST00000496340 CATIPQ7Z7H3 387 aa12.66□□□□□ -0.38
NEPRO-224ENST00000496340 IL31RAQ8NI17 732 aa12.66□□□□□ -0.38
NEPRO-224ENST00000496340 PPP1R13LQ8WUF5 828 aa12.66□□□□□ -0.38
NEPRO-224ENST00000496340 NEK1Q96PY6 1258 aa12.66□□□□□ -0.38
NEPRO-224ENST00000496340 AMNQ9BXJ7 453 aa12.66□□□□□ -0.38
NEPRO-224ENST00000496340 FAM217BQ9NTX9 383 aaPredicted RBP12.66□□□□□ -0.38
NEPRO-224ENST00000496340 ATP11BQ9Y2G3 1177 aa12.66□□□□□ -0.38
NEPRO-224ENST00000496340 PCDHA1Q9Y5I3 950 aa12.66□□□□□ -0.38
NEPRO-224ENST00000496340 ERICH2A1L162 156 aa12.65□□□□□ -0.38
NEPRO-224ENST00000496340 CFBP00751 764 aa12.65□□□□□ -0.38
NEPRO-224ENST00000496340 NEFLP07196 543 aa12.65□□□□□ -0.38
NEPRO-224ENST00000496340 LIFRP42702 1097 aa12.65□□□□□ -0.38
NEPRO-224ENST00000496340 MDM2Q00987 491 aaPredicted RBP12.65□□□□□ -0.38
NEPRO-224ENST00000496340 FUT2Q10981 343 aa12.65□□□□□ -0.38
NEPRO-224ENST00000496340 GNASQ5JWF2 1037 aa12.65□□□□□ -0.38
NEPRO-224ENST00000496340 CASC1Q6TDU7 716 aa12.65□□□□□ -0.38
NEPRO-224ENST00000496340 RNF180Q86T96 592 aa12.65□□□□□ -0.38
NEPRO-224ENST00000496340 TLK2Q86UE8 772 aa12.65□□□□□ -0.38
NEPRO-224ENST00000496340 SGMS1Q86VZ5 419 aa12.65□□□□□ -0.38
NEPRO-224ENST00000496340 CCDC82Q8N4S0 544 aa12.65□□□□□ -0.38
NEPRO-224ENST00000496340 TMEM87BQ96K49 555 aa12.65□□□□□ -0.38
NEPRO-224ENST00000496340 MTA3Q9BTC8 594 aa12.65□□□□□ -0.38
NEPRO-224ENST00000496340 WDR11Q9BZH6 1224 aa12.65□□□□□ -0.38
NEPRO-224ENST00000496340 BCAS3Q9H6U6 928 aa12.65□□□□□ -0.38
NEPRO-224ENST00000496340 VTA1Q9NP79 307 aa12.65□□□□□ -0.38
NEPRO-224ENST00000496340 LTBP2Q14767 1821 aa12.65□□□□□ -0.39
NEPRO-224ENST00000496340 PNMA6FA0A0J9YX94 578 aa12.64□□□□□ -0.39
NEPRO-224ENST00000496340 DDAH1O94760 285 aa12.64□□□□□ -0.39
NEPRO-224ENST00000496340 EIF2AK2P19525 551 aaKnown RBP12.64□□□□□ -0.39
NEPRO-224ENST00000496340 CDK7P50613 346 aa12.64□□□□□ -0.39
NEPRO-224ENST00000496340 SART3Q15020 963 aaKnown RBP12.64□□□□□ -0.39
NEPRO-224ENST00000496340 DUSP28Q4G0W2 176 aa12.64□□□□□ -0.39
NEPRO-224ENST00000496340 C1orf53Q5VUE5 145 aa12.64□□□□□ -0.39
NEPRO-224ENST00000496340 IQSEC1Q6DN90 963 aa12.64□□□□□ -0.39
NEPRO-224ENST00000496340 CCDC62Q6P9F0 684 aa12.64□□□□□ -0.39
NEPRO-224ENST00000496340 CXCL17Q6UXB2 119 aa12.64□□□□□ -0.39
NEPRO-224ENST00000496340 DHX32Q7L7V1 743 aaKnown RBP12.64□□□□□ -0.39
NEPRO-224ENST00000496340 FANCBQ8NB91 859 aa12.64□□□□□ -0.39
NEPRO-224ENST00000496340 DNERQ8NFT8 737 aa12.64□□□□□ -0.39
NEPRO-224ENST00000496340 GPKOWQ92917 476 aaPredicted RBP eCLIP12.64□□□□□ -0.39
NEPRO-224ENST00000496340 MAP3K14Q99558 947 aa12.64□□□□□ -0.39
NEPRO-224ENST00000496340 TSEN34Q9BSV6 310 aaKnown RBP12.64□□□□□ -0.39
NEPRO-224ENST00000496340 SPZ1Q9BXG8 430 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms