RNA–Protein interactions for RNA: ENST00000496202.5

PRPF3-207, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 1 (best)

Gene PRPF3, Length 1,082 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-207ENST00000496202 ZNF713Q8N859 430 aaPredicted RBP11.15□□□□□ -0.62
PRPF3-207ENST00000496202 NECAB1Q8N987 351 aa11.15□□□□□ -0.62
PRPF3-207ENST00000496202 CLEC4DQ8WXI8 215 aa11.15□□□□□ -0.62
PRPF3-207ENST00000496202 GPKOWQ92917 476 aaPredicted RBP eCLIP11.15□□□□□ -0.62
PRPF3-207ENST00000496202 CUL5Q93034 780 aa11.15□□□□□ -0.62
PRPF3-207ENST00000496202 GTF3C6Q969F1 213 aa11.15□□□□□ -0.62
PRPF3-207ENST00000496202 RNF26Q9BY78 433 aaPredicted RBP11.15□□□□□ -0.62
PRPF3-207ENST00000496202 MCOLN1Q9GZU1 580 aa11.15□□□□□ -0.62
PRPF3-207ENST00000496202 CYP39A1Q9NYL5 469 aa11.15□□□□□ -0.62
PRPF3-207ENST00000496202 CIZ1Q9ULV3 898 aaPredicted RBP11.15□□□□□ -0.62
PRPF3-207ENST00000496202 MCM3APO60318 1980 aa11.15□□□□□ -0.62
PRPF3-207ENST00000496202 KIAA0100Q14667 2235 aaKnown RBP11.15□□□□□ -0.63
PRPF3-207ENST00000496202 PRPF3O43395 683 aaKnown RBP11.14□□□□□ -0.63
PRPF3-207ENST00000496202 HMGCRP04035 888 aa11.14□□□□□ -0.63
PRPF3-207ENST00000496202 HOXC6P09630 235 aa11.14□□□□□ -0.63
PRPF3-207ENST00000496202 SCG2P13521 617 aa11.14□□□□□ -0.63
PRPF3-207ENST00000496202 ELNP15502 786 aa11.14□□□□□ -0.63
PRPF3-207ENST00000496202 CALML3P27482 149 aa11.14□□□□□ -0.63
PRPF3-207ENST00000496202 BAATQ14032 418 aaPredicted RBP11.14□□□□□ -0.63
PRPF3-207ENST00000496202 PFKFB3Q16875 520 aaPredicted RBP11.14□□□□□ -0.63
PRPF3-207ENST00000496202 MFSD14CQ5VZR4 134 aa11.14□□□□□ -0.63
PRPF3-207ENST00000496202 WWC2Q6AWC2 1192 aa11.14□□□□□ -0.63
PRPF3-207ENST00000496202 PPP1R18Q6NYC8 613 aa11.14□□□□□ -0.63
PRPF3-207ENST00000496202 SLC30A10Q6XR72 485 aa11.14□□□□□ -0.63
PRPF3-207ENST00000496202 CCDC83Q8IWF9 413 aa11.14□□□□□ -0.63
PRPF3-207ENST00000496202 CCDC12Q8WUD4 166 aaPredicted RBP11.14□□□□□ -0.63
PRPF3-207ENST00000496202 USP6NLQ92738 828 aa11.14□□□□□ -0.63
PRPF3-207ENST00000496202 MAF1Q9H063 256 aa11.14□□□□□ -0.63
PRPF3-207ENST00000496202 ADD3Q9UEY8 706 aaKnown RBP11.14□□□□□ -0.63
PRPF3-207ENST00000496202 STK36Q9NRP7 1315 aa11.13□□□□□ -0.63
PRPF3-207ENST00000496202 DNAJC25-GNG10A0A024R161 153 aa11.13□□□□□ -0.63
PRPF3-207ENST00000496202 B4DLN1 442 aa11.13□□□□□ -0.63
PRPF3-207ENST00000496202 GCOM1H8Y6P7 765 aaPredicted RBP11.13□□□□□ -0.63
PRPF3-207ENST00000496202 COBLO75128 1261 aa11.13□□□□□ -0.63
PRPF3-207ENST00000496202 DEXIO95424 95 aa11.13□□□□□ -0.63
PRPF3-207ENST00000496202 POLR2MP0CAP2 368 aa11.13□□□□□ -0.63
PRPF3-207ENST00000496202 ADCY7P51828 1080 aa11.13□□□□□ -0.63
PRPF3-207ENST00000496202 MRPL12P52815 198 aaKnown RBP11.13□□□□□ -0.63
PRPF3-207ENST00000496202 RPS6P62753 249 aaKnown RBP11.13□□□□□ -0.63
PRPF3-207ENST00000496202 UBXN2AP68543 259 aa11.13□□□□□ -0.63
PRPF3-207ENST00000496202 NTRK3Q16288 839 aa11.13□□□□□ -0.63
PRPF3-207ENST00000496202 COL13A1Q5TAT6 717 aaPredicted RBP11.13□□□□□ -0.63
PRPF3-207ENST00000496202 SAMD3Q8N6K7 520 aa11.13□□□□□ -0.63
PRPF3-207ENST00000496202 RGS22Q8NE09 1264 aa11.13□□□□□ -0.63
PRPF3-207ENST00000496202 CCDC148Q8NFR7 591 aa11.13□□□□□ -0.63
PRPF3-207ENST00000496202 PXYLP1Q8TE99 480 aa11.13□□□□□ -0.63
PRPF3-207ENST00000496202 WASF1Q92558 559 aa11.13□□□□□ -0.63
PRPF3-207ENST00000496202 MPHOSPH6Q99547 160 aaKnown RBP11.13□□□□□ -0.63
PRPF3-207ENST00000496202 ORC3Q9UBD5 711 aaPredicted RBP11.13□□□□□ -0.63
PRPF3-207ENST00000496202 DIS3Q9Y2L1 958 aaKnown RBP11.13□□□□□ -0.63
PRPF3-207ENST00000496202 LCTP09848 1927 aa11.13□□□□□ -0.63
PRPF3-207ENST00000496202 STXBP3O00186 592 aa11.12□□□□□ -0.63
PRPF3-207ENST00000496202 XBP1P17861 261 aa11.12□□□□□ -0.63
PRPF3-207ENST00000496202 CNTN2Q02246 1040 aa11.12□□□□□ -0.63
PRPF3-207ENST00000496202 CCL14Q16627 93 aa11.12□□□□□ -0.63
PRPF3-207ENST00000496202 ZNF792Q3KQV3 632 aa11.12□□□□□ -0.63
PRPF3-207ENST00000496202 OLFML2BQ68BL8 750 aa11.12□□□□□ -0.63
PRPF3-207ENST00000496202 TNS4Q8IZW8 715 aa11.12□□□□□ -0.63
PRPF3-207ENST00000496202 FAM133AQ8N9E0 248 aa11.12□□□□□ -0.63
PRPF3-207ENST00000496202 SMARCC2Q8TAQ2 1214 aa11.12□□□□□ -0.63
PRPF3-207ENST00000496202 NPLOC4Q8TAT6 608 aa11.12□□□□□ -0.63
PRPF3-207ENST00000496202 SH3TC2Q8TF17 1288 aa11.12□□□□□ -0.63
PRPF3-207ENST00000496202 TRIB2Q92519 343 aa11.12□□□□□ -0.63
PRPF3-207ENST00000496202 MAML3Q96JK9 1138 aa11.12□□□□□ -0.63
PRPF3-207ENST00000496202 GLT8D2Q9H1C3 349 aa11.12□□□□□ -0.63
PRPF3-207ENST00000496202 PSTPIP2Q9H939 334 aa11.12□□□□□ -0.63
PRPF3-207ENST00000496202 BARHL2Q9NY43 387 aa11.12□□□□□ -0.63
PRPF3-207ENST00000496202 MAP3K20Q9NYL2 800 aaKnown RBP11.12□□□□□ -0.63
PRPF3-207ENST00000496202 ASB14A6NK59 587 aa11.11□□□□□ -0.63
PRPF3-207ENST00000496202 OPLAHO14841 1288 aa11.11□□□□□ -0.63
PRPF3-207ENST00000496202 CD2BP2O95400 341 aaKnown RBP11.11□□□□□ -0.63
PRPF3-207ENST00000496202 INHAP05111 366 aa11.11□□□□□ -0.63
PRPF3-207ENST00000496202 HOXA13P31271 388 aaPredicted RBP11.11□□□□□ -0.63
PRPF3-207ENST00000496202 HSD17B4P51659 736 aa11.11□□□□□ -0.63
PRPF3-207ENST00000496202 PKN1Q16512 942 aa11.11□□□□□ -0.63
PRPF3-207ENST00000496202 ZNF467Q7Z7K2 595 aaPredicted RBP11.11□□□□□ -0.63
PRPF3-207ENST00000496202 FCHSD1Q86WN1 690 aa11.11□□□□□ -0.63
PRPF3-207ENST00000496202 HSCBQ8IWL3 235 aa11.11□□□□□ -0.63
PRPF3-207ENST00000496202 MSL3Q8N5Y2 521 aaKnown RBP11.11□□□□□ -0.63
PRPF3-207ENST00000496202 NSUN7Q8NE18 718 aaKnown RBP11.11□□□□□ -0.63
PRPF3-207ENST00000496202 DNERQ8NFT8 737 aa11.11□□□□□ -0.63
PRPF3-207ENST00000496202 SYTL5Q8TDW5 730 aaPredicted RBP11.11□□□□□ -0.63
PRPF3-207ENST00000496202 TMX3Q96JJ7 454 aa11.11□□□□□ -0.63
PRPF3-207ENST00000496202 LLPHQ9BRT6 129 aaKnown RBP11.11□□□□□ -0.63
PRPF3-207ENST00000496202 EHMT1Q9H9B1 1298 aa11.11□□□□□ -0.63
PRPF3-207ENST00000496202 C6orf50Q9HD87 102 aa11.11□□□□□ -0.63
PRPF3-207ENST00000496202 CNPY2Q9Y2B0 182 aa11.11□□□□□ -0.63
PRPF3-207ENST00000496202 KIF3AQ9Y496 699 aa11.11□□□□□ -0.63
PRPF3-207ENST00000496202 LOC102724159A0A0B4J2E5 919 aa11.1□□□□□ -0.63
PRPF3-207ENST00000496202 SOWAHBA6NEL2 793 aa11.1□□□□□ -0.63
PRPF3-207ENST00000496202 SMCO2A6NFE2 343 aa11.1□□□□□ -0.63
PRPF3-207ENST00000496202 CTDNEP1O95476 244 aa11.1□□□□□ -0.63
PRPF3-207ENST00000496202 MYCP01106 439 aaPredicted RBP11.1□□□□□ -0.63
PRPF3-207ENST00000496202 PRKAR2AP13861 404 aaKnown RBP11.1□□□□□ -0.63
PRPF3-207ENST00000496202 GNA11P29992 359 aa11.1□□□□□ -0.63
PRPF3-207ENST00000496202 CYP2C19P33261 490 aa11.1□□□□□ -0.63
PRPF3-207ENST00000496202 ALDH5A1P51649 535 aaPredicted RBP11.1□□□□□ -0.63
PRPF3-207ENST00000496202 NLRP5P59047 1200 aa11.1□□□□□ -0.63
PRPF3-207ENST00000496202 HMGN5P82970 282 aaKnown RBP11.1□□□□□ -0.63
PRPF3-207ENST00000496202 GHRHRQ02643 423 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms