RNA–Protein interactions for RNA: ENST00000495756.5

ATG3-208, Transcript of autophagy related 3, humanhuman

TSL 1 (best)

Gene ATG3, Length 1,455 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-208ENST00000495756 HOXA13P31271 388 aaPredicted RBP22.34■■□□□ 1.17
ATG3-208ENST00000495756 KRT2P35908 639 aa22.34■■□□□ 1.17
ATG3-208ENST00000495756 RPS6P62753 249 aaKnown RBP22.34■■□□□ 1.17
ATG3-208ENST00000495756 UBE2SQ16763 222 aa22.34■■□□□ 1.17
ATG3-208ENST00000495756 DIS3L2Q8IYB7 885 aaKnown RBP22.34■■□□□ 1.17
ATG3-208ENST00000495756 REXO1Q8N1G1 1221 aaKnown RBP22.34■■□□□ 1.17
ATG3-208ENST00000495756 ANKRD35Q8N283 1001 aa22.34■■□□□ 1.17
ATG3-208ENST00000495756 SAMD3Q8N6K7 520 aa22.34■■□□□ 1.17
ATG3-208ENST00000495756 OXER1Q8TDS5 423 aa22.34■■□□□ 1.17
ATG3-208ENST00000495756 BRMS1Q9HCU9 246 aa22.34■■□□□ 1.17
ATG3-208ENST00000495756 MAP3K20Q9NYL2 800 aaKnown RBP22.34■■□□□ 1.17
ATG3-208ENST00000495756 BTBD18B2RXH4 712 aa22.33■■□□□ 1.16
ATG3-208ENST00000495756 FCER1AP12319 257 aa22.33■■□□□ 1.16
ATG3-208ENST00000495756 CLK2P49760 499 aaKnown RBP22.33■■□□□ 1.16
ATG3-208ENST00000495756 PKP1Q13835 747 aa22.33■■□□□ 1.16
ATG3-208ENST00000495756 BAATQ14032 418 aaPredicted RBP22.33■■□□□ 1.16
ATG3-208ENST00000495756 SLC30A10Q6XR72 485 aa22.33■■□□□ 1.16
ATG3-208ENST00000495756 GPR142Q7Z601 462 aa22.33■■□□□ 1.16
ATG3-208ENST00000495756 CYP39A1Q9NYL5 469 aa22.33■■□□□ 1.16
ATG3-208ENST00000495756 BIN2Q9UBW5 565 aaPredicted RBP22.33■■□□□ 1.16
ATG3-208ENST00000495756 PFASO15067 1338 aa22.33■■□□□ 1.16
ATG3-208ENST00000495756 M0R2N6 131 aa22.32■■□□□ 1.16
ATG3-208ENST00000495756 STRNO43815 780 aa22.32■■□□□ 1.16
ATG3-208ENST00000495756 LACTBP83111 547 aaPredicted RBP22.32■■□□□ 1.16
ATG3-208ENST00000495756 SP3Q02447 781 aa22.32■■□□□ 1.16
ATG3-208ENST00000495756 KCTD2Q14681 263 aa22.32■■□□□ 1.16
ATG3-208ENST00000495756 PLEKHH3Q7Z736 793 aa22.32■■□□□ 1.16
ATG3-208ENST00000495756 RASGRP4Q8TDF6 673 aa22.32■■□□□ 1.16
ATG3-208ENST00000495756 MMP19Q99542 508 aa22.32■■□□□ 1.16
ATG3-208ENST00000495756 IVNS1ABPQ9Y6Y0 642 aa22.32■■□□□ 1.16
ATG3-208ENST00000495756 GPR25O00155 361 aa22.31■■□□□ 1.16
ATG3-208ENST00000495756 NR5A1Q13285 461 aa22.31■■□□□ 1.16
ATG3-208ENST00000495756 NOM1Q5C9Z4 860 aaKnown RBP22.31■■□□□ 1.16
ATG3-208ENST00000495756 MCTP1Q6DN14 999 aa22.31■■□□□ 1.16
ATG3-208ENST00000495756 ABRAQ8N0Z2 381 aa22.31■■□□□ 1.16
ATG3-208ENST00000495756 SYTL5Q8TDW5 730 aaPredicted RBP22.31■■□□□ 1.16
ATG3-208ENST00000495756 FOXP1Q9H334 677 aaPredicted RBP22.31■■□□□ 1.16
ATG3-208ENST00000495756 TMEM260Q9NX78 707 aa22.31■■□□□ 1.16
ATG3-208ENST00000495756 PCDHA6Q9UN73 950 aa22.31■■□□□ 1.16
ATG3-208ENST00000495756 PCDHA8Q9Y5H6 950 aa22.31■■□□□ 1.16
ATG3-208ENST00000495756 PLXNB2O15031 1838 aa22.31■■□□□ 1.16
ATG3-208ENST00000495756 ECM2O94769 699 aaPredicted RBP22.3■■□□□ 1.16
ATG3-208ENST00000495756 PTPREP23469 700 aa22.3■■□□□ 1.16
ATG3-208ENST00000495756 JAKMIP3Q5VZ66 844 aa22.3■■□□□ 1.16
ATG3-208ENST00000495756 JMYQ8N9B5 988 aa22.3■■□□□ 1.16
ATG3-208ENST00000495756 TNFRSF25Q93038 417 aa22.3■■□□□ 1.16
ATG3-208ENST00000495756 COL20A1Q9P218 1284 aa22.3■■□□□ 1.16
ATG3-208ENST00000495756 KIF28PB7ZC32 967 aa22.29■■□□□ 1.16
ATG3-208ENST00000495756 U2AF2P26368 475 aaKnown RBP eCLIP22.29■■□□□ 1.16
ATG3-208ENST00000495756 CTGFP29279 349 aa22.29■■□□□ 1.16
ATG3-208ENST00000495756 AP3B2Q13367 1082 aa22.29■■□□□ 1.16
ATG3-208ENST00000495756 GNL2Q13823 731 aaKnown RBP22.29■■□□□ 1.16
ATG3-208ENST00000495756 MCTP2Q6DN12 878 aa22.29■■□□□ 1.16
ATG3-208ENST00000495756 FCHSD1Q86WN1 690 aa22.29■■□□□ 1.16
ATG3-208ENST00000495756 CIZ1Q9ULV3 898 aaPredicted RBP22.29■■□□□ 1.16
ATG3-208ENST00000495756 MGAMO43451 1857 aa22.29■■□□□ 1.16
ATG3-208ENST00000495756 SPDYE3A6NKU9 549 aa22.28■■□□□ 1.16
ATG3-208ENST00000495756 TNPO2O14787 897 aaKnown RBP22.28■■□□□ 1.16
ATG3-208ENST00000495756 FOSP01100 380 aaPredicted RBP22.28■■□□□ 1.16
ATG3-208ENST00000495756 ZSCAN22P10073 491 aaPredicted RBP22.28■■□□□ 1.16
ATG3-208ENST00000495756 PSMC4P43686 418 aa22.28■■□□□ 1.16
ATG3-208ENST00000495756 FCGRTP55899 365 aa22.28■■□□□ 1.16
ATG3-208ENST00000495756 GRB14Q14449 540 aa22.28■■□□□ 1.16
ATG3-208ENST00000495756 FERMT3Q86UX7 667 aa22.28■■□□□ 1.16
ATG3-208ENST00000495756 NOSTRINQ8IVI9 506 aa22.28■■□□□ 1.16
ATG3-208ENST00000495756 ARHGAP39Q9C0H5 1083 aa22.28■■□□□ 1.16
ATG3-208ENST00000495756 TSKSQ9UJT2 592 aa22.28■■□□□ 1.16
ATG3-208ENST00000495756 ZNFX1Q9P2E3 1918 aaKnown RBP22.28■■□□□ 1.16
ATG3-208ENST00000495756 DNAJC25-GNG10A0A024R161 153 aa22.28■■□□□ 1.16
ATG3-208ENST00000495756 SLC15A5A6NIM6 579 aa22.28■■□□□ 1.16
ATG3-208ENST00000495756 POTEB2H3BUK9 544 aa22.28■■□□□ 1.16
ATG3-208ENST00000495756 BRD1O95696 1058 aa22.28■■□□□ 1.16
ATG3-208ENST00000495756 PGK2P07205 417 aa22.28■■□□□ 1.16
ATG3-208ENST00000495756 ADORA2AP29274 412 aa22.28■■□□□ 1.16
ATG3-208ENST00000495756 NUCB2P80303 420 aa22.28■■□□□ 1.16
ATG3-208ENST00000495756 KIF22Q14807 665 aa22.28■■□□□ 1.16
ATG3-208ENST00000495756 KRT25Q7Z3Z0 450 aa22.28■■□□□ 1.16
ATG3-208ENST00000495756 TRIM47Q96LD4 638 aa22.28■■□□□ 1.16
ATG3-208ENST00000495756 PURBQ96QR8 312 aaKnown RBP22.28■■□□□ 1.16
ATG3-208ENST00000495756 ZDHHC9Q9Y397 364 aa22.28■■□□□ 1.16
ATG3-208ENST00000495756 ZNF236Q9UL36 1845 aa22.27■■□□□ 1.16
ATG3-208ENST00000495756 FKTNO75072 461 aa22.27■■□□□ 1.16
ATG3-208ENST00000495756 CNTN2Q02246 1040 aa22.27■■□□□ 1.16
ATG3-208ENST00000495756 MORN1Q5T089 497 aa22.27■■□□□ 1.16
ATG3-208ENST00000495756 FAM133AQ8N9E0 248 aa22.27■■□□□ 1.16
ATG3-208ENST00000495756 ZNF296Q8WUU4 475 aaPredicted RBP22.27■■□□□ 1.16
ATG3-208ENST00000495756 PGBD1Q96JS3 809 aa22.27■■□□□ 1.16
ATG3-208ENST00000495756 TAAR1Q96RJ0 339 aa22.27■■□□□ 1.16
ATG3-208ENST00000495756 ANO3Q9BYT9 981 aa22.27■■□□□ 1.16
ATG3-208ENST00000495756 ZSWIM8A7E2V4 1837 aa22.27■■□□□ 1.15
ATG3-208ENST00000495756 LCTP09848 1927 aa22.27■■□□□ 1.15
ATG3-208ENST00000495756 DOCK3Q8IZD9 2030 aa22.27■■□□□ 1.15
ATG3-208ENST00000495756 CCDC194A0A1B0GVG4 234 aa22.26■■□□□ 1.15
ATG3-208ENST00000495756 RESTQ13127 1097 aa22.26■■□□□ 1.15
ATG3-208ENST00000495756 EARS2Q5JPH6 523 aaKnown RBP22.26■■□□□ 1.15
ATG3-208ENST00000495756 FOXD4L5Q5VV16 416 aaPredicted RBP22.26■■□□□ 1.15
ATG3-208ENST00000495756 PIK3AP1Q6ZUJ8 805 aa22.26■■□□□ 1.15
ATG3-208ENST00000495756 FOXD4L4Q8WXT5 416 aaPredicted RBP22.26■■□□□ 1.15
ATG3-208ENST00000495756 RMDN3Q96TC7 470 aa22.26■■□□□ 1.15
ATG3-208ENST00000495756 FAM205CA6NFA0 338 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms