RNA–Protein interactions for RNA: ENST00000495755.1

VPS52-221, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-221ENST00000495755 TRDNQ13061 729 aa8.43□□□□□ -1.06
VPS52-221ENST00000495755 CDC37Q16543 378 aaPredicted RBP8.43□□□□□ -1.06
VPS52-221ENST00000495755 GPR153Q6NV75 609 aa8.43□□□□□ -1.06
VPS52-221ENST00000495755 STOX1Q6ZVD7 989 aa8.43□□□□□ -1.06
VPS52-221ENST00000495755 NOL8Q76FK4 1167 aaKnown RBP8.43□□□□□ -1.06
VPS52-221ENST00000495755 EEPD1Q7L9B9 569 aa8.43□□□□□ -1.06
VPS52-221ENST00000495755 FBXO16Q8IX29 292 aaPredicted RBP8.43□□□□□ -1.06
VPS52-221ENST00000495755 TBC1D5Q92609 795 aa8.43□□□□□ -1.06
VPS52-221ENST00000495755 GLT1D1Q96MS3 346 aa8.43□□□□□ -1.06
VPS52-221ENST00000495755 JMJD4Q9H9V9 463 aa8.43□□□□□ -1.06
VPS52-221ENST00000495755 PRDM5Q9NQX1 630 aaPredicted RBP8.43□□□□□ -1.06
VPS52-221ENST00000495755 Q9Y3F1 56 aa8.43□□□□□ -1.06
VPS52-221ENST00000495755 ABCB11O95342 1321 aa8.43□□□□□ -1.06
VPS52-221ENST00000495755 CHD9Q3L8U1 2897 aa8.43□□□□□ -1.06
VPS52-221ENST00000495755 LCTP09848 1927 aa8.42□□□□□ -1.06
VPS52-221ENST00000495755 PALM3A6NDB9 673 aaPredicted RBP8.42□□□□□ -1.06
VPS52-221ENST00000495755 DCDC2CA8MYV0 355 aa8.42□□□□□ -1.06
VPS52-221ENST00000495755 KLRF2D3W0D1 207 aa8.42□□□□□ -1.06
VPS52-221ENST00000495755 ARVCFO00192 962 aa8.42□□□□□ -1.06
VPS52-221ENST00000495755 BEX3Q00994 111 aa8.42□□□□□ -1.06
VPS52-221ENST00000495755 FSCN1Q16658 493 aaKnown RBP8.42□□□□□ -1.06
VPS52-221ENST00000495755 SLC35G1Q2M3R5 365 aa8.42□□□□□ -1.06
VPS52-221ENST00000495755 QRICH1Q2TAL8 776 aa8.42□□□□□ -1.06
VPS52-221ENST00000495755 USH1GQ495M9 461 aa8.42□□□□□ -1.06
VPS52-221ENST00000495755 DUSP28Q4G0W2 176 aa8.42□□□□□ -1.06
VPS52-221ENST00000495755 KIAA1211Q6ZU35 1233 aa8.42□□□□□ -1.06
VPS52-221ENST00000495755 TLK2Q86UE8 772 aa8.42□□□□□ -1.06
VPS52-221ENST00000495755 STAG2Q8N3U4 1231 aa8.42□□□□□ -1.06
VPS52-221ENST00000495755 SLC43A3Q8NBI5 491 aa8.42□□□□□ -1.06
VPS52-221ENST00000495755 DNERQ8NFT8 737 aa8.42□□□□□ -1.06
VPS52-221ENST00000495755 MTMR8Q96EF0 704 aa8.42□□□□□ -1.06
VPS52-221ENST00000495755 AP5M1Q9H0R1 490 aa8.42□□□□□ -1.06
VPS52-221ENST00000495755 SENP2Q9HC62 589 aa8.42□□□□□ -1.06
VPS52-221ENST00000495755 VAT1LQ9HCJ6 419 aa8.42□□□□□ -1.06
VPS52-221ENST00000495755 TMEM39AQ9NV64 488 aa8.42□□□□□ -1.06
VPS52-221ENST00000495755 MAD2L2Q9UI95 211 aa8.42□□□□□ -1.06
VPS52-221ENST00000495755 TBX21Q9UL17 535 aa8.42□□□□□ -1.06
VPS52-221ENST00000495755 RBM8AQ9Y5S9 174 aaKnown RBP8.42□□□□□ -1.06
VPS52-221ENST00000495755 LRRC37A2A6NM11 1700 aa8.42□□□□□ -1.06
VPS52-221ENST00000495755 LTBP2Q14767 1821 aa8.42□□□□□ -1.06
VPS52-221ENST00000495755 GRIN2DO15399 1336 aa8.41□□□□□ -1.06
VPS52-221ENST00000495755 A0A0U1RQG5 324 aaPredicted RBP8.41□□□□□ -1.06
VPS52-221ENST00000495755 IFIT3O14879 490 aaKnown RBP8.41□□□□□ -1.06
VPS52-221ENST00000495755 PPP1R11O60927 126 aaPredicted RBP8.41□□□□□ -1.06
VPS52-221ENST00000495755 CABYRO75952 493 aa8.41□□□□□ -1.06
VPS52-221ENST00000495755 EPHB4P54760 987 aa8.41□□□□□ -1.06
VPS52-221ENST00000495755 ANTXR2P58335 489 aa8.41□□□□□ -1.06
VPS52-221ENST00000495755 GHRHRQ02643 423 aa8.41□□□□□ -1.06
VPS52-221ENST00000495755 PDE4DQ08499 809 aa8.41□□□□□ -1.06
VPS52-221ENST00000495755 TROAPQ12815 778 aa8.41□□□□□ -1.06
VPS52-221ENST00000495755 GRM4Q14833 912 aa8.41□□□□□ -1.06
VPS52-221ENST00000495755 SHHQ15465 462 aa8.41□□□□□ -1.06
VPS52-221ENST00000495755 C9orf50Q5SZB4 431 aa8.41□□□□□ -1.06
VPS52-221ENST00000495755 CXCL17Q6UXB2 119 aa8.41□□□□□ -1.06
VPS52-221ENST00000495755 CENPQQ7L2Z9 268 aaPredicted RBP8.41□□□□□ -1.06
VPS52-221ENST00000495755 RALYLQ86SE5 291 aaKnown RBP8.41□□□□□ -1.06
VPS52-221ENST00000495755 FBXO11Q86XK2 927 aa8.41□□□□□ -1.06
VPS52-221ENST00000495755 MCF2L2Q86YR7 1114 aa8.41□□□□□ -1.06
VPS52-221ENST00000495755 FAM126BQ8IXS8 530 aa8.41□□□□□ -1.06
VPS52-221ENST00000495755 MB21D2Q8IYB1 491 aaPredicted RBP8.41□□□□□ -1.06
VPS52-221ENST00000495755 NCOA7Q8NI08 942 aa8.41□□□□□ -1.06
VPS52-221ENST00000495755 SYTL5Q8TDW5 730 aaPredicted RBP8.41□□□□□ -1.06
VPS52-221ENST00000495755 IGDCC4Q8TDY8 1250 aa8.41□□□□□ -1.06
VPS52-221ENST00000495755 VTI1AQ96AJ9 217 aa8.41□□□□□ -1.06
VPS52-221ENST00000495755 ESYT1Q9BSJ8 1104 aa8.41□□□□□ -1.06
VPS52-221ENST00000495755 WDR11Q9BZH6 1224 aa8.41□□□□□ -1.06
VPS52-221ENST00000495755 LSG1Q9H089 658 aaKnown RBP8.41□□□□□ -1.06
VPS52-221ENST00000495755 COL20A1Q9P218 1284 aa8.41□□□□□ -1.06
VPS52-221ENST00000495755 MRPL11Q9Y3B7 192 aaKnown RBP8.41□□□□□ -1.06
VPS52-221ENST00000495755 MROH7Q68CQ1 1323 aa8.4□□□□□ -1.06
VPS52-221ENST00000495755 B4DLN1 442 aa8.4□□□□□ -1.06
VPS52-221ENST00000495755 OPLAHO14841 1288 aa8.4□□□□□ -1.06
VPS52-221ENST00000495755 ZBTB5O15062 677 aa8.4□□□□□ -1.06
VPS52-221ENST00000495755 DHX16O60231 1041 aaKnown RBP8.4□□□□□ -1.06
VPS52-221ENST00000495755 ZEB2O60315 1214 aa8.4□□□□□ -1.06
VPS52-221ENST00000495755 TIMP1P01033 207 aa8.4□□□□□ -1.06
VPS52-221ENST00000495755 CD4P01730 458 aa8.4□□□□□ -1.06
VPS52-221ENST00000495755 RAG1P15918 1043 aa8.4□□□□□ -1.06
VPS52-221ENST00000495755 HSD17B4P51659 736 aa8.4□□□□□ -1.06
VPS52-221ENST00000495755 MRPL12P52815 198 aaKnown RBP8.4□□□□□ -1.06
VPS52-221ENST00000495755 ITGA7Q13683 1181 aa8.4□□□□□ -1.06
VPS52-221ENST00000495755 WTAPQ15007 396 aa8.4□□□□□ -1.06
VPS52-221ENST00000495755 BMP2KLQ5H9B9 411 aa8.4□□□□□ -1.06
VPS52-221ENST00000495755 CHST3Q7LGC8 479 aa8.4□□□□□ -1.06
VPS52-221ENST00000495755 SKAP1Q86WV1 359 aa8.4□□□□□ -1.06
VPS52-221ENST00000495755 NSUN6Q8TEA1 469 aaKnown RBP8.4□□□□□ -1.06
VPS52-221ENST00000495755 SCFD2Q8WU76 684 aa8.4□□□□□ -1.06
VPS52-221ENST00000495755 TAAR1Q96RJ0 339 aa8.4□□□□□ -1.06
VPS52-221ENST00000495755 IWS1Q96ST2 819 aa8.4□□□□□ -1.06
VPS52-221ENST00000495755 MPHOSPH6Q99547 160 aaKnown RBP8.4□□□□□ -1.06
VPS52-221ENST00000495755 MTA3Q9BTC8 594 aa8.4□□□□□ -1.06
VPS52-221ENST00000495755 AMNQ9BXJ7 453 aa8.4□□□□□ -1.06
VPS52-221ENST00000495755 SEZ6LQ9BYH1 1024 aa8.4□□□□□ -1.06
VPS52-221ENST00000495755 RIOX1Q9H6W3 641 aa8.4□□□□□ -1.06
VPS52-221ENST00000495755 EYSQ5T1H1 3165 aa8.39□□□□□ -1.07
VPS52-221ENST00000495755 ERICH2A1L162 156 aa8.39□□□□□ -1.07
VPS52-221ENST00000495755 A6NJR5 290 aa8.39□□□□□ -1.07
VPS52-221ENST00000495755 SLC27A2O14975 620 aa8.39□□□□□ -1.07
VPS52-221ENST00000495755 NKRFO15226 690 aaKnown RBP eCLIP8.39□□□□□ -1.07
VPS52-221ENST00000495755 CYTH3O43739 400 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms