RNA–Protein interactions for RNA: ENST00000495630.1

TMEM53-209, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-209ENST00000495630 WDR11Q9BZH6 1224 aa20.76■□□□□ 0.91
TMEM53-209ENST00000495630 RBM47A0AV96 593 aaKnown RBP20.75■□□□□ 0.91
TMEM53-209ENST00000495630 NMT2O60551 498 aa20.75■□□□□ 0.91
TMEM53-209ENST00000495630 ATP2A2P16615 1042 aaKnown RBP20.75■□□□□ 0.91
TMEM53-209ENST00000495630 PPP2R2DQ66LE6 453 aa20.75■□□□□ 0.91
TMEM53-209ENST00000495630 BTNL9Q6UXG8 535 aa20.75■□□□□ 0.91
TMEM53-209ENST00000495630 PURBQ96QR8 312 aaKnown RBP20.75■□□□□ 0.91
TMEM53-209ENST00000495630 RANBP17Q9H2T7 1088 aaKnown RBP20.75■□□□□ 0.91
TMEM53-209ENST00000495630 INCENPQ9NQS7 918 aa20.75■□□□□ 0.91
TMEM53-209ENST00000495630 ANAPC4Q9UJX5 808 aa20.75■□□□□ 0.91
TMEM53-209ENST00000495630 ZBBXA8MT70 800 aa20.74■□□□□ 0.91
TMEM53-209ENST00000495630 RANBP6O60518 1105 aaKnown RBP20.74■□□□□ 0.91
TMEM53-209ENST00000495630 MYOGP15173 224 aa20.74■□□□□ 0.91
TMEM53-209ENST00000495630 POU3F3P20264 500 aaPredicted RBP20.74■□□□□ 0.91
TMEM53-209ENST00000495630 CPT1AP50416 773 aa20.74■□□□□ 0.91
TMEM53-209ENST00000495630 CTDSPL2Q05D32 466 aa20.74■□□□□ 0.91
TMEM53-209ENST00000495630 GPHNQ9NQX3 736 aaPredicted RBP20.74■□□□□ 0.91
TMEM53-209ENST00000495630 ORC4O43929 436 aa20.73■□□□□ 0.91
TMEM53-209ENST00000495630 ALDH5A1P51649 535 aaPredicted RBP20.73■□□□□ 0.91
TMEM53-209ENST00000495630 PURAQ00577 322 aaKnown RBP20.73■□□□□ 0.91
TMEM53-209ENST00000495630 AAK1Q2M2I8 961 aa20.73■□□□□ 0.91
TMEM53-209ENST00000495630 TMEM67Q5HYA8 995 aa20.73■□□□□ 0.91
TMEM53-209ENST00000495630 MTG1Q9BT17 334 aaPredicted RBP20.73■□□□□ 0.91
TMEM53-209ENST00000495630 TRMT13Q9NUP7 481 aaKnown RBP20.73■□□□□ 0.91
TMEM53-209ENST00000495630 PNMA2Q9UL42 364 aa20.73■□□□□ 0.91
TMEM53-209ENST00000495630 MTMR7Q9Y216 660 aa20.73■□□□□ 0.91
TMEM53-209ENST00000495630 TNKSO95271 1327 aa20.73■□□□□ 0.91
TMEM53-209ENST00000495630 FOXP2O15409 715 aa20.72■□□□□ 0.91
TMEM53-209ENST00000495630 KPNA6O60684 536 aa20.72■□□□□ 0.91
TMEM53-209ENST00000495630 FGRP09769 529 aa20.72■□□□□ 0.91
TMEM53-209ENST00000495630 CYP2C9P11712 490 aa20.72■□□□□ 0.91
TMEM53-209ENST00000495630 BMP1P13497 986 aa20.72■□□□□ 0.91
TMEM53-209ENST00000495630 TTLL4Q14679 1199 aa20.72■□□□□ 0.91
TMEM53-209ENST00000495630 CCDC96Q2M329 555 aa20.72■□□□□ 0.91
TMEM53-209ENST00000495630 BRDTQ58F21 947 aaPredicted RBP20.72■□□□□ 0.91
TMEM53-209ENST00000495630 SYDE2Q5VT97 1194 aa20.72■□□□□ 0.91
TMEM53-209ENST00000495630 TTBK2Q6IQ55 1244 aa20.72■□□□□ 0.91
TMEM53-209ENST00000495630 NKRFO15226 690 aaKnown RBP eCLIP20.71■□□□□ 0.91
TMEM53-209ENST00000495630 MYL3P08590 195 aa20.71■□□□□ 0.91
TMEM53-209ENST00000495630 ACTN1P12814 892 aa20.71■□□□□ 0.91
TMEM53-209ENST00000495630 RFC2P35250 354 aa20.71■□□□□ 0.91
TMEM53-209ENST00000495630 SLC16A2P36021 539 aa20.71■□□□□ 0.91
TMEM53-209ENST00000495630 ALX1Q15699 326 aa20.71■□□□□ 0.91
TMEM53-209ENST00000495630 OR6J1Q8NGC5 347 aa20.71■□□□□ 0.91
TMEM53-209ENST00000495630 PHOSPHO2Q8TCD6 241 aa20.71■□□□□ 0.91
TMEM53-209ENST00000495630 CHD7Q9P2D1 2997 aa20.71■□□□□ 0.91
TMEM53-209ENST00000495630 PTPDC1A2A3K4 754 aa20.7■□□□□ 0.9
TMEM53-209ENST00000495630 NFIBO00712 420 aa20.7■□□□□ 0.9
TMEM53-209ENST00000495630 TOP1P11387 765 aaKnown RBP20.7■□□□□ 0.9
TMEM53-209ENST00000495630 NBPF20Q3BBV1 942 aa20.7■□□□□ 0.9
TMEM53-209ENST00000495630 NFRKBQ6P4R8 1299 aa20.7■□□□□ 0.9
TMEM53-209ENST00000495630 RASGRP2Q7LDG7 609 aa20.7■□□□□ 0.9
TMEM53-209ENST00000495630 DEFB128Q7Z7B8 93 aa20.7■□□□□ 0.9
TMEM53-209ENST00000495630 RETREG2Q8NC44 543 aa20.7■□□□□ 0.9
TMEM53-209ENST00000495630 MPHOSPH6Q99547 160 aaKnown RBP20.7■□□□□ 0.9
TMEM53-209ENST00000495630 TCP11L1Q9NUJ3 509 aa20.7■□□□□ 0.9
TMEM53-209ENST00000495630 NCOR1O75376 2440 aa20.7■□□□□ 0.9
TMEM53-209ENST00000495630 PITPNM1O00562 1244 aa20.69■□□□□ 0.9
TMEM53-209ENST00000495630 GTPBP6O43824 516 aaPredicted RBP20.69■□□□□ 0.9
TMEM53-209ENST00000495630 PTPN11Q06124 597 aaPredicted RBP20.69■□□□□ 0.9
TMEM53-209ENST00000495630 MICALL1Q8N3F8 863 aa20.69■□□□□ 0.9
TMEM53-209ENST00000495630 OTUD7AQ8TE49 926 aaPredicted RBP20.69■□□□□ 0.9
TMEM53-209ENST00000495630 CLEC4DQ8WXI8 215 aa20.69■□□□□ 0.9
TMEM53-209ENST00000495630 A6NJR5 290 aa20.68■□□□□ 0.9
TMEM53-209ENST00000495630 B4DLN1 442 aa20.68■□□□□ 0.9
TMEM53-209ENST00000495630 CA3P07451 260 aa20.68■□□□□ 0.9
TMEM53-209ENST00000495630 IQCF3P0C7M6 154 aa20.68■□□□□ 0.9
TMEM53-209ENST00000495630 MX1P20591 662 aa20.68■□□□□ 0.9
TMEM53-209ENST00000495630 MRPL12P52815 198 aaKnown RBP20.68■□□□□ 0.9
TMEM53-209ENST00000495630 PDE4DQ08499 809 aa20.68■□□□□ 0.9
TMEM53-209ENST00000495630 FAM47CQ5HY64 1035 aa20.68■□□□□ 0.9
TMEM53-209ENST00000495630 RNF207Q6ZRF8 634 aa20.68■□□□□ 0.9
TMEM53-209ENST00000495630 DNERQ8NFT8 737 aa20.68■□□□□ 0.9
TMEM53-209ENST00000495630 SCFD2Q8WU76 684 aa20.68■□□□□ 0.9
TMEM53-209ENST00000495630 SLC9A7Q96T83 725 aa20.68■□□□□ 0.9
TMEM53-209ENST00000495630 TMEM47Q9BQJ4 181 aa20.68■□□□□ 0.9
TMEM53-209ENST00000495630 GPCPD1Q9NPB8 672 aa20.68■□□□□ 0.9
TMEM53-209ENST00000495630 MTCH2Q9Y6C9 303 aa20.68■□□□□ 0.9
TMEM53-209ENST00000495630 RAD50Q92878 1312 aa20.68■□□□□ 0.9
TMEM53-209ENST00000495630 KIF28PB7ZC32 967 aa20.67■□□□□ 0.9
TMEM53-209ENST00000495630 CALML3P27482 149 aa20.67■□□□□ 0.9
TMEM53-209ENST00000495630 PPP2R5BQ15173 497 aa20.67■□□□□ 0.9
TMEM53-209ENST00000495630 SKIV2LQ15477 1246 aaKnown RBP20.67■□□□□ 0.9
TMEM53-209ENST00000495630 VPS53Q5VIR6 699 aa20.67■□□□□ 0.9
TMEM53-209ENST00000495630 TTC14Q96N46 770 aa20.67■□□□□ 0.9
TMEM53-209ENST00000495630 HELLSQ9NRZ9 838 aa20.67■□□□□ 0.9
TMEM53-209ENST00000495630 RFXAPO00287 272 aa20.66■□□□□ 0.9
TMEM53-209ENST00000495630 FGAP02671 866 aa20.66■□□□□ 0.9
TMEM53-209ENST00000495630 EDNRBP24530 442 aa20.66■□□□□ 0.9
TMEM53-209ENST00000495630 RPS6P62753 249 aaKnown RBP20.66■□□□□ 0.9
TMEM53-209ENST00000495630 TFF2Q03403 129 aa20.66■□□□□ 0.9
TMEM53-209ENST00000495630 BFSP2Q13515 415 aa20.66■□□□□ 0.9
TMEM53-209ENST00000495630 SLC30A10Q6XR72 485 aa20.66■□□□□ 0.9
TMEM53-209ENST00000495630 EVI5LQ96CN4 794 aa20.66■□□□□ 0.9
TMEM53-209ENST00000495630 C1QTNF1Q9BXJ1 281 aa20.66■□□□□ 0.9
TMEM53-209ENST00000495630 FTOQ9C0B1 505 aaKnown RBP eCLIP20.66■□□□□ 0.9
TMEM53-209ENST00000495630 TOMM22Q9NS69 142 aa20.66■□□□□ 0.9
TMEM53-209ENST00000495630 PCDHB15Q9Y5E8 787 aa20.66■□□□□ 0.9
TMEM53-209ENST00000495630 FRMPD2Q68DX3 1309 aaPredicted RBP20.66■□□□□ 0.9
TMEM53-209ENST00000495630 PDHBP11177 359 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms