RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 KIAA1468Q9P260 1216 aa18.53■□□□□ 0.56
CBX4-204ENST00000495122 SYNPO2Q9UMS6 1093 aa18.53■□□□□ 0.56
CBX4-204ENST00000495122 ESYT2A0FGR8 921 aa18.52■□□□□ 0.56
CBX4-204ENST00000495122 TPM3P06753 285 aa18.52■□□□□ 0.56
CBX4-204ENST00000495122 MARCKSP29966 332 aaPredicted RBP18.52■□□□□ 0.56
CBX4-204ENST00000495122 SHMT1P34896 483 aa18.52■□□□□ 0.56
CBX4-204ENST00000495122 ZNF165P49910 485 aa18.52■□□□□ 0.56
CBX4-204ENST00000495122 TREML2Q5T2D2 321 aa18.52■□□□□ 0.56
CBX4-204ENST00000495122 PPP1R18Q6NYC8 613 aa18.52■□□□□ 0.56
CBX4-204ENST00000495122 ZNF280CQ8ND82 737 aa18.52■□□□□ 0.56
CBX4-204ENST00000495122 SHISA4Q96DD7 197 aa18.52■□□□□ 0.56
CBX4-204ENST00000495122 TMEM106CQ9BVX2 250 aa18.52■□□□□ 0.56
CBX4-204ENST00000495122 SEC63Q9UGP8 760 aaKnown RBP18.52■□□□□ 0.56
CBX4-204ENST00000495122 RLFQ13129 1914 aa18.51■□□□□ 0.55
CBX4-204ENST00000495122 HOXD10P28358 340 aa18.51■□□□□ 0.55
CBX4-204ENST00000495122 FCGRTP55899 365 aa18.51■□□□□ 0.55
CBX4-204ENST00000495122 SPP2Q13103 211 aa18.51■□□□□ 0.55
CBX4-204ENST00000495122 TTC38Q5R3I4 469 aa18.51■□□□□ 0.55
CBX4-204ENST00000495122 GPATCH4Q5T3I0 446 aaKnown RBP18.51■□□□□ 0.55
CBX4-204ENST00000495122 ARL6IP4Q66PJ3 421 aaKnown RBP18.51■□□□□ 0.55
CBX4-204ENST00000495122 RIOX1Q9H6W3 641 aa18.51■□□□□ 0.55
CBX4-204ENST00000495122 CBX8Q9HC52 389 aa18.51■□□□□ 0.55
CBX4-204ENST00000495122 PCDHB6Q9Y5E3 794 aa18.51■□□□□ 0.55
CBX4-204ENST00000495122 A0A0G2JMZ2 1700 aa18.5■□□□□ 0.55
CBX4-204ENST00000495122 USP17L5A8MUK1 530 aa18.5■□□□□ 0.55
CBX4-204ENST00000495122 ESPNB1AK53 854 aa18.5■□□□□ 0.55
CBX4-204ENST00000495122 GNA11P29992 359 aa18.5■□□□□ 0.55
CBX4-204ENST00000495122 ZSCAN30Q86W11 494 aa18.5■□□□□ 0.55
CBX4-204ENST00000495122 STAG2Q8N3U4 1231 aa18.5■□□□□ 0.55
CBX4-204ENST00000495122 TUBE1Q9UJT0 475 aa18.5■□□□□ 0.55
CBX4-204ENST00000495122 PNMA3Q9UL41 463 aa18.5■□□□□ 0.55
CBX4-204ENST00000495122 KCNH3Q9ULD8 1083 aa18.5■□□□□ 0.55
CBX4-204ENST00000495122 COL11A1P12107 1806 aaPredicted RBP18.5■□□□□ 0.55
CBX4-204ENST00000495122 STXBP3O00186 592 aa18.49■□□□□ 0.55
CBX4-204ENST00000495122 LAD1O00515 517 aa18.49■□□□□ 0.55
CBX4-204ENST00000495122 ASNSP08243 561 aa18.49■□□□□ 0.55
CBX4-204ENST00000495122 PDHBP11177 359 aa18.49■□□□□ 0.55
CBX4-204ENST00000495122 AKR1B1P15121 316 aa18.49■□□□□ 0.55
CBX4-204ENST00000495122 HMGCS2P54868 508 aa18.49■□□□□ 0.55
CBX4-204ENST00000495122 JAG1P78504 1218 aa18.49■□□□□ 0.55
CBX4-204ENST00000495122 ATP2C1P98194 919 aaPredicted RBP18.49■□□□□ 0.55
CBX4-204ENST00000495122 PRKCZQ05513 592 aa18.49■□□□□ 0.55
CBX4-204ENST00000495122 SH3D19Q5HYK7 790 aa18.49■□□□□ 0.55
CBX4-204ENST00000495122 TATDN1Q6P1N9 297 aa18.49■□□□□ 0.55
CBX4-204ENST00000495122 KRT25Q7Z3Z0 450 aa18.49■□□□□ 0.55
CBX4-204ENST00000495122 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.49■□□□□ 0.55
CBX4-204ENST00000495122 RAET1EQ8TD07 263 aa18.49■□□□□ 0.55
CBX4-204ENST00000495122 SMCR8Q8TEV9 937 aaPredicted RBP18.49■□□□□ 0.55
CBX4-204ENST00000495122 MKL1Q969V6 931 aa18.49■□□□□ 0.55
CBX4-204ENST00000495122 WDR18Q9BV38 432 aa18.49■□□□□ 0.55
CBX4-204ENST00000495122 TRIM34Q9BYJ4 488 aa18.49■□□□□ 0.55
CBX4-204ENST00000495122 ZMYND12Q9H0C1 365 aa18.49■□□□□ 0.55
CBX4-204ENST00000495122 AS3MTQ9HBK9 375 aa18.49■□□□□ 0.55
CBX4-204ENST00000495122 C6orf50Q9HD87 102 aa18.49■□□□□ 0.55
CBX4-204ENST00000495122 NYAP2Q9P242 653 aa18.49■□□□□ 0.55
CBX4-204ENST00000495122 GOLGA6L6A8MZA4 724 aa18.48■□□□□ 0.55
CBX4-204ENST00000495122 GOLGA6L19H0YKK7 550 aa18.48■□□□□ 0.55
CBX4-204ENST00000495122 M0R2N6 131 aa18.48■□□□□ 0.55
CBX4-204ENST00000495122 ADCY5O95622 1261 aa18.48■□□□□ 0.55
CBX4-204ENST00000495122 MYCP01106 439 aaPredicted RBP18.48■□□□□ 0.55
CBX4-204ENST00000495122 GRK4P32298 578 aa18.48■□□□□ 0.55
CBX4-204ENST00000495122 NLRP12P59046 1061 aa18.48■□□□□ 0.55
CBX4-204ENST00000495122 SHROOM1Q2M3G4 852 aaPredicted RBP18.48■□□□□ 0.55
CBX4-204ENST00000495122 WWC2Q6AWC2 1192 aa18.48■□□□□ 0.55
CBX4-204ENST00000495122 SARM1Q6SZW1 724 aa18.48■□□□□ 0.55
CBX4-204ENST00000495122 KRBA2Q6ZNG9 492 aa18.48■□□□□ 0.55
CBX4-204ENST00000495122 DNAJC25Q9H1X3 360 aa18.48■□□□□ 0.55
CBX4-204ENST00000495122 KANSL2Q9H9L4 492 aa18.48■□□□□ 0.55
CBX4-204ENST00000495122 GABRQQ9UN88 632 aa18.48■□□□□ 0.55
CBX4-204ENST00000495122 ZNFX1Q9P2E3 1918 aaKnown RBP18.48■□□□□ 0.55
CBX4-204ENST00000495122 MYH4Q9Y623 1939 aa18.47■□□□□ 0.55
CBX4-204ENST00000495122 CCDC194A0A1B0GVG4 234 aa18.47■□□□□ 0.55
CBX4-204ENST00000495122 hCG_1642624A0A1W2PR95 340 aa18.47■□□□□ 0.55
CBX4-204ENST00000495122 CYTH3O43739 400 aa18.47■□□□□ 0.55
CBX4-204ENST00000495122 GDF11O95390 407 aa18.47■□□□□ 0.55
CBX4-204ENST00000495122 IQCB1Q15051 598 aa18.47■□□□□ 0.55
CBX4-204ENST00000495122 FAM110CQ1W6H9 321 aa18.47■□□□□ 0.55
CBX4-204ENST00000495122 TMEM179Q6ZVK1 233 aa18.47■□□□□ 0.55
CBX4-204ENST00000495122 TEX2Q8IWB9 1127 aa18.47■□□□□ 0.55
CBX4-204ENST00000495122 DCAF4Q8WV16 495 aa18.47■□□□□ 0.55
CBX4-204ENST00000495122 GLT8D2Q9H1C3 349 aa18.47■□□□□ 0.55
CBX4-204ENST00000495122 GINM1Q9NU53 330 aa18.47■□□□□ 0.55
CBX4-204ENST00000495122 ZBTB21Q9ULJ3 1066 aa18.47■□□□□ 0.55
CBX4-204ENST00000495122 CEP290O15078 2479 aa18.46■□□□□ 0.55
CBX4-204ENST00000495122 TPM4P67936 248 aa18.46■□□□□ 0.55
CBX4-204ENST00000495122 ZNF543Q08ER8 600 aa18.46■□□□□ 0.55
CBX4-204ENST00000495122 PABPC4Q13310 644 aaKnown RBP eCLIP18.46■□□□□ 0.55
CBX4-204ENST00000495122 MTMR2Q13614 643 aa18.46■□□□□ 0.55
CBX4-204ENST00000495122 MTFR1Q15390 333 aa18.46■□□□□ 0.55
CBX4-204ENST00000495122 CT47A1Q5JQC4 288 aaPredicted RBP18.46■□□□□ 0.55
CBX4-204ENST00000495122 HEATR3Q7Z4Q2 680 aa18.46■□□□□ 0.55
CBX4-204ENST00000495122 ANKRD13CQ8N6S4 541 aa18.46■□□□□ 0.55
CBX4-204ENST00000495122 TRIML1Q8N9V2 468 aa18.46■□□□□ 0.55
CBX4-204ENST00000495122 SLAIN1Q8ND83 568 aa18.46■□□□□ 0.55
CBX4-204ENST00000495122 CNNM3Q8NE01 707 aa18.46■□□□□ 0.55
CBX4-204ENST00000495122 SMTNL1A8MU46 457 aa18.45■□□□□ 0.54
CBX4-204ENST00000495122 BECN2A8MW95 431 aa18.45■□□□□ 0.54
CBX4-204ENST00000495122 TNPO2O14787 897 aaKnown RBP18.45■□□□□ 0.54
CBX4-204ENST00000495122 PTMAP06454 111 aaKnown RBP18.45■□□□□ 0.54
CBX4-204ENST00000495122 CDC25BP30305 580 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms