RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 CACNB1Q02641 598 aaPredicted RBP12.4□□□□□ -0.42
NELFE-213ENST00000494956 TRDNQ13061 729 aa12.4□□□□□ -0.42
NELFE-213ENST00000494956 ASPRV1Q53RT3 343 aa12.4□□□□□ -0.42
NELFE-213ENST00000494956 GNASQ5JWF2 1037 aa12.4□□□□□ -0.42
NELFE-213ENST00000494956 KIAA1211Q6ZU35 1233 aa12.4□□□□□ -0.42
NELFE-213ENST00000494956 CENPQQ7L2Z9 268 aaPredicted RBP12.4□□□□□ -0.42
NELFE-213ENST00000494956 MORC4Q8TE76 937 aa12.4□□□□□ -0.42
NELFE-213ENST00000494956 BADQ92934 168 aa12.4□□□□□ -0.42
NELFE-213ENST00000494956 ESYT1Q9BSJ8 1104 aa12.4□□□□□ -0.42
NELFE-213ENST00000494956 MYL10Q9BUA6 226 aa12.4□□□□□ -0.42
NELFE-213ENST00000494956 UPF3AQ9H1J1 476 aaKnown RBP12.4□□□□□ -0.42
NELFE-213ENST00000494956 STARD7Q9NQZ5 370 aa12.4□□□□□ -0.42
NELFE-213ENST00000494956 COL20A1Q9P218 1284 aa12.4□□□□□ -0.42
NELFE-213ENST00000494956 RANBP2P49792 3224 aaKnown RBP12.39□□□□□ -0.43
NELFE-213ENST00000494956 SPDYE4A6NLX3 237 aa12.39□□□□□ -0.43
NELFE-213ENST00000494956 KLRF2D3W0D1 207 aa12.39□□□□□ -0.43
NELFE-213ENST00000494956 DYNC1LI2O43237 492 aaPredicted RBP12.39□□□□□ -0.43
NELFE-213ENST00000494956 CST5P28325 142 aaPredicted RBP12.39□□□□□ -0.43
NELFE-213ENST00000494956 RALYLQ86SE5 291 aaKnown RBP12.39□□□□□ -0.43
NELFE-213ENST00000494956 TLK2Q86UE8 772 aa12.39□□□□□ -0.43
NELFE-213ENST00000494956 MB21D2Q8IYB1 491 aaPredicted RBP12.39□□□□□ -0.43
NELFE-213ENST00000494956 TDHQ8IZJ6 230 aa12.39□□□□□ -0.43
NELFE-213ENST00000494956 NCOA7Q8NI08 942 aa12.39□□□□□ -0.43
NELFE-213ENST00000494956 PPP1R13LQ8WUF5 828 aa12.39□□□□□ -0.43
NELFE-213ENST00000494956 COPS5Q92905 334 aa12.39□□□□□ -0.43
NELFE-213ENST00000494956 VTI1AQ96AJ9 217 aa12.39□□□□□ -0.43
NELFE-213ENST00000494956 TAAR1Q96RJ0 339 aa12.39□□□□□ -0.43
NELFE-213ENST00000494956 TSEN34Q9BSV6 310 aaKnown RBP12.39□□□□□ -0.43
NELFE-213ENST00000494956 OPLAHO14841 1288 aa12.38□□□□□ -0.43
NELFE-213ENST00000494956 SLC27A2O14975 620 aa12.38□□□□□ -0.43
NELFE-213ENST00000494956 FAAP100Q0VG06 881 aa12.38□□□□□ -0.43
NELFE-213ENST00000494956 GRM4Q14833 912 aa12.38□□□□□ -0.43
NELFE-213ENST00000494956 WTAPQ15007 396 aa12.38□□□□□ -0.43
NELFE-213ENST00000494956 C9orf50Q5SZB4 431 aa12.38□□□□□ -0.43
NELFE-213ENST00000494956 C1orf53Q5VUE5 145 aa12.38□□□□□ -0.43
NELFE-213ENST00000494956 CXCL17Q6UXB2 119 aa12.38□□□□□ -0.43
NELFE-213ENST00000494956 FBXO11Q86XK2 927 aa12.38□□□□□ -0.43
NELFE-213ENST00000494956 RAB11FIP4Q86YS3 637 aa12.38□□□□□ -0.43
NELFE-213ENST00000494956 IGDCC4Q8TDY8 1250 aa12.38□□□□□ -0.43
NELFE-213ENST00000494956 PIBF1Q8WXW3 757 aa12.38□□□□□ -0.43
NELFE-213ENST00000494956 LBHD1Q9BQE6 289 aaPredicted RBP12.38□□□□□ -0.43
NELFE-213ENST00000494956 PRKAG2Q9UGJ0 569 aa12.38□□□□□ -0.43
NELFE-213ENST00000494956 A0A1W2PPC1 479 aa12.37□□□□□ -0.43
NELFE-213ENST00000494956 PALM3A6NDB9 673 aaPredicted RBP12.37□□□□□ -0.43
NELFE-213ENST00000494956 MOXD2PA6NHM9 499 aa12.37□□□□□ -0.43
NELFE-213ENST00000494956 RBAK-RBAKDNI3L0D1 243 aa12.37□□□□□ -0.43
NELFE-213ENST00000494956 CYTH3O43739 400 aa12.37□□□□□ -0.43
NELFE-213ENST00000494956 ARIH2O95376 493 aa12.37□□□□□ -0.43
NELFE-213ENST00000494956 CLTBP09497 229 aa12.37□□□□□ -0.43
NELFE-213ENST00000494956 NT5C2P49902 561 aa12.37□□□□□ -0.43
NELFE-213ENST00000494956 EPHB4P54760 987 aa12.37□□□□□ -0.43
NELFE-213ENST00000494956 PSMC6P62333 389 aa12.37□□□□□ -0.43
NELFE-213ENST00000494956 FSCN1Q16658 493 aaKnown RBP12.37□□□□□ -0.43
NELFE-213ENST00000494956 TMEM67Q5HYA8 995 aa12.37□□□□□ -0.43
NELFE-213ENST00000494956 IQSEC1Q6DN90 963 aa12.37□□□□□ -0.43
NELFE-213ENST00000494956 HOMER1Q86YM7 354 aa12.37□□□□□ -0.43
NELFE-213ENST00000494956 PCSK9Q8NBP7 692 aaKnown RBP12.37□□□□□ -0.43
NELFE-213ENST00000494956 SYTL5Q8TDW5 730 aaPredicted RBP12.37□□□□□ -0.43
NELFE-213ENST00000494956 NUP133Q8WUM0 1156 aa12.37□□□□□ -0.43
NELFE-213ENST00000494956 PIGSQ96S52 555 aa12.37□□□□□ -0.43
NELFE-213ENST00000494956 LRRC2Q9BYS8 371 aa12.37□□□□□ -0.43
NELFE-213ENST00000494956 WDR11Q9BZH6 1224 aa12.37□□□□□ -0.43
NELFE-213ENST00000494956 SPC25Q9HBM1 224 aa12.37□□□□□ -0.43
NELFE-213ENST00000494956 VTA1Q9NP79 307 aa12.37□□□□□ -0.43
NELFE-213ENST00000494956 ANO2Q9NQ90 1003 aa12.37□□□□□ -0.43
NELFE-213ENST00000494956 ADD3Q9UEY8 706 aaKnown RBP12.37□□□□□ -0.43
NELFE-213ENST00000494956 KIAA1217Q5T5P2 1943 aa12.37□□□□□ -0.43
NELFE-213ENST00000494956 ABCB11O95342 1321 aa12.37□□□□□ -0.43
NELFE-213ENST00000494956 ERICH2A1L162 156 aa12.36□□□□□ -0.43
NELFE-213ENST00000494956 CFBP00751 764 aa12.36□□□□□ -0.43
NELFE-213ENST00000494956 RXRAP19793 462 aa12.36□□□□□ -0.43
NELFE-213ENST00000494956 EDNRBP24530 442 aa12.36□□□□□ -0.43
NELFE-213ENST00000494956 CDK7P50613 346 aa12.36□□□□□ -0.43
NELFE-213ENST00000494956 PDE4DQ08499 809 aa12.36□□□□□ -0.43
NELFE-213ENST00000494956 TROAPQ12815 778 aa12.36□□□□□ -0.43
NELFE-213ENST00000494956 NECTIN1Q15223 517 aa12.36□□□□□ -0.43
NELFE-213ENST00000494956 SHHQ15465 462 aa12.36□□□□□ -0.43
NELFE-213ENST00000494956 BMP2KLQ5H9B9 411 aa12.36□□□□□ -0.43
NELFE-213ENST00000494956 CREB3L3Q68CJ9 461 aa12.36□□□□□ -0.43
NELFE-213ENST00000494956 Q7L0L9 218 aa12.36□□□□□ -0.43
NELFE-213ENST00000494956 MTMR8Q96EF0 704 aa12.36□□□□□ -0.43
NELFE-213ENST00000494956 ZFP91Q96JP5 570 aaPredicted RBP12.36□□□□□ -0.43
NELFE-213ENST00000494956 GLT1D1Q96MS3 346 aa12.36□□□□□ -0.43
NELFE-213ENST00000494956 LY9Q9HBG7 655 aa12.36□□□□□ -0.43
NELFE-213ENST00000494956 TMEM39AQ9NV64 488 aa12.36□□□□□ -0.43
NELFE-213ENST00000494956 GRIN2DO15399 1336 aa12.36□□□□□ -0.43
NELFE-213ENST00000494956 MYH7BA7E2Y1 1941 aa12.35□□□□□ -0.43
NELFE-213ENST00000494956 A0A0U1RQG5 324 aaPredicted RBP12.35□□□□□ -0.43
NELFE-213ENST00000494956 ARVCFO00192 962 aa12.35□□□□□ -0.43
NELFE-213ENST00000494956 ZBTB5O15062 677 aa12.35□□□□□ -0.43
NELFE-213ENST00000494956 PRC1O43663 620 aa12.35□□□□□ -0.43
NELFE-213ENST00000494956 EIF2AK2P19525 551 aaKnown RBP12.35□□□□□ -0.43
NELFE-213ENST00000494956 HOXA13P31271 388 aaPredicted RBP12.35□□□□□ -0.43
NELFE-213ENST00000494956 NKX3-2P78367 333 aa12.35□□□□□ -0.43
NELFE-213ENST00000494956 DUSP28Q4G0W2 176 aa12.35□□□□□ -0.43
NELFE-213ENST00000494956 ANKRD33Q7Z3H0 272 aa12.35□□□□□ -0.43
NELFE-213ENST00000494956 CMTR1Q8N1G2 835 aaKnown RBP12.35□□□□□ -0.43
NELFE-213ENST00000494956 CCDC136Q96JN2 1154 aa12.35□□□□□ -0.43
NELFE-213ENST00000494956 TCEANC2Q96MN5 208 aa12.35□□□□□ -0.43
NELFE-213ENST00000494956 AMNQ9BXJ7 453 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms