RNA–Protein interactions for RNA: ENST00000494938.2

SCAP-213, Transcript of SREBF chaperone, humanhuman

TSL 4

Gene SCAP, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-213ENST00000494938 HOMER1Q86YM7 354 aa16.68■□□□□ 0.26
SCAP-213ENST00000494938 MCF2L2Q86YR7 1114 aa16.68■□□□□ 0.26
SCAP-213ENST00000494938 CMTR1Q8N1G2 835 aaKnown RBP16.68■□□□□ 0.26
SCAP-213ENST00000494938 HTATIP2Q9BUP3 242 aa16.68■□□□□ 0.26
SCAP-213ENST00000494938 PDGFCQ9NRA1 345 aa16.68■□□□□ 0.26
SCAP-213ENST00000494938 LOC102724159A0A0B4J2E5 919 aa16.67■□□□□ 0.26
SCAP-213ENST00000494938 PGK1P00558 417 aa16.67■□□□□ 0.26
SCAP-213ENST00000494938 RPS6KB1P23443 525 aa16.67■□□□□ 0.26
SCAP-213ENST00000494938 EDNRBP24530 442 aa16.67■□□□□ 0.26
SCAP-213ENST00000494938 GHRHRQ02643 423 aa16.67■□□□□ 0.26
SCAP-213ENST00000494938 PWP2Q15269 919 aaKnown RBP16.67■□□□□ 0.26
SCAP-213ENST00000494938 APOA5Q6Q788 366 aa16.67■□□□□ 0.26
SCAP-213ENST00000494938 FBXL16Q8N461 479 aa16.67■□□□□ 0.26
SCAP-213ENST00000494938 DNERQ8NFT8 737 aa16.67■□□□□ 0.26
SCAP-213ENST00000494938 PIBF1Q8WXW3 757 aa16.67■□□□□ 0.26
SCAP-213ENST00000494938 TAAR1Q96RJ0 339 aa16.67■□□□□ 0.26
SCAP-213ENST00000494938 XPNPEP3Q9NQH7 507 aa16.67■□□□□ 0.26
SCAP-213ENST00000494938 FAM217BQ9NTX9 383 aaPredicted RBP16.67■□□□□ 0.26
SCAP-213ENST00000494938 ADD3Q9UEY8 706 aaKnown RBP16.67■□□□□ 0.26
SCAP-213ENST00000494938 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.66■□□□□ 0.26
SCAP-213ENST00000494938 ADAMTS4O75173 837 aa16.66■□□□□ 0.26
SCAP-213ENST00000494938 DUSP11O75319 330 aaKnown RBP16.66■□□□□ 0.26
SCAP-213ENST00000494938 HSD17B4P51659 736 aa16.66■□□□□ 0.26
SCAP-213ENST00000494938 TMEM63BQ5T3F8 832 aa16.66■□□□□ 0.26
SCAP-213ENST00000494938 PRPF38BQ5VTL8 546 aaKnown RBP16.66■□□□□ 0.26
SCAP-213ENST00000494938 BLOC1S2Q6QNY1 142 aa16.66■□□□□ 0.26
SCAP-213ENST00000494938 SYNE3Q6ZMZ3 975 aa16.66■□□□□ 0.26
SCAP-213ENST00000494938 Q6ZUG5 572 aa16.66■□□□□ 0.26
SCAP-213ENST00000494938 TMTC3Q6ZXV5 915 aa16.66■□□□□ 0.26
SCAP-213ENST00000494938 EEPD1Q7L9B9 569 aa16.66■□□□□ 0.26
SCAP-213ENST00000494938 KLHDC9Q8NEP7 349 aa16.66■□□□□ 0.26
SCAP-213ENST00000494938 SENP6Q9GZR1 1112 aaPredicted RBP16.66■□□□□ 0.26
SCAP-213ENST00000494938 ZSWIM6Q9HCJ5 1215 aa16.66■□□□□ 0.26
SCAP-213ENST00000494938 ZNFX1Q9P2E3 1918 aaKnown RBP16.66■□□□□ 0.26
SCAP-213ENST00000494938 DNAH12Q6ZR08 3092 aa16.66■□□□□ 0.26
SCAP-213ENST00000494938 PSMA5P28066 241 aa16.65■□□□□ 0.26
SCAP-213ENST00000494938 ADCYAP1R1P41586 468 aa16.65■□□□□ 0.26
SCAP-213ENST00000494938 IRX5P78411 483 aaPredicted RBP16.65■□□□□ 0.26
SCAP-213ENST00000494938 FUT2Q10981 343 aa16.65■□□□□ 0.26
SCAP-213ENST00000494938 IQSEC1Q6DN90 963 aa16.65■□□□□ 0.26
SCAP-213ENST00000494938 CCSAPQ6IQ19 270 aaPredicted RBP16.65■□□□□ 0.26
SCAP-213ENST00000494938 MICU3Q86XE3 530 aa16.65■□□□□ 0.26
SCAP-213ENST00000494938 FBXO16Q8IX29 292 aaPredicted RBP16.65■□□□□ 0.26
SCAP-213ENST00000494938 CCDC82Q8N4S0 544 aa16.65■□□□□ 0.26
SCAP-213ENST00000494938 RRP36Q96EU6 259 aaKnown RBP16.65■□□□□ 0.26
SCAP-213ENST00000494938 AGXT2Q9BYV1 514 aa16.65■□□□□ 0.26
SCAP-213ENST00000494938 VTA1Q9NP79 307 aa16.65■□□□□ 0.26
SCAP-213ENST00000494938 GNEQ9Y223 722 aaKnown RBP16.65■□□□□ 0.26
SCAP-213ENST00000494938 SMCHD1A6NHR9 2005 aa16.65■□□□□ 0.26
SCAP-213ENST00000494938 KLF18A0A0U1RQI7 1052 aa16.64■□□□□ 0.25
SCAP-213ENST00000494938 RBM47A0AV96 593 aaKnown RBP16.64■□□□□ 0.25
SCAP-213ENST00000494938 H0YGN5 161 aa16.64■□□□□ 0.25
SCAP-213ENST00000494938 CTAGE5O15320 804 aa16.64■□□□□ 0.25
SCAP-213ENST00000494938 ZBTB43O43298 467 aa16.64■□□□□ 0.25
SCAP-213ENST00000494938 CFBP00751 764 aa16.64■□□□□ 0.25
SCAP-213ENST00000494938 SMPD1P17405 629 aa16.64■□□□□ 0.25
SCAP-213ENST00000494938 CASTP20810 708 aaKnown RBP16.64■□□□□ 0.25
SCAP-213ENST00000494938 PTGS1P23219 599 aa16.64■□□□□ 0.25
SCAP-213ENST00000494938 GJA9P57773 515 aa16.64■□□□□ 0.25
SCAP-213ENST00000494938 NKX3-2P78367 333 aa16.64■□□□□ 0.25
SCAP-213ENST00000494938 TNFAIP2Q03169 654 aa16.64■□□□□ 0.25
SCAP-213ENST00000494938 APOBRQ0VD83 1088 aa16.64■□□□□ 0.25
SCAP-213ENST00000494938 TRAF1Q13077 416 aa16.64■□□□□ 0.25
SCAP-213ENST00000494938 LRRC26Q2I0M4 334 aa16.64■□□□□ 0.25
SCAP-213ENST00000494938 SAMD3Q8N6K7 520 aa16.64■□□□□ 0.25
SCAP-213ENST00000494938 TM6SF1Q9BZW5 370 aa16.64■□□□□ 0.25
SCAP-213ENST00000494938 UPF3AQ9H1J1 476 aaKnown RBP16.64■□□□□ 0.25
SCAP-213ENST00000494938 MAP3K20Q9NYL2 800 aaKnown RBP16.64■□□□□ 0.25
SCAP-213ENST00000494938 SYNRGQ9UMZ2 1314 aa16.64■□□□□ 0.25
SCAP-213ENST00000494938 PDE4DIPQ5VU43 2346 aa16.63■□□□□ 0.25
SCAP-213ENST00000494938 hCG_1642624A0A1W2PR95 340 aa16.63■□□□□ 0.25
SCAP-213ENST00000494938 MYADML2A6NDP7 307 aa16.63■□□□□ 0.25
SCAP-213ENST00000494938 EVI5O60447 810 aa16.63■□□□□ 0.25
SCAP-213ENST00000494938 SEC24BO95487 1268 aa16.63■□□□□ 0.25
SCAP-213ENST00000494938 MYCNP04198 464 aaPredicted RBP16.63■□□□□ 0.25
SCAP-213ENST00000494938 CDC27P30260 824 aa16.63■□□□□ 0.25
SCAP-213ENST00000494938 RUFY3Q7L099 469 aa16.63■□□□□ 0.25
SCAP-213ENST00000494938 RNF180Q86T96 592 aa16.63■□□□□ 0.25
SCAP-213ENST00000494938 NSUN6Q8TEA1 469 aaKnown RBP16.63■□□□□ 0.25
SCAP-213ENST00000494938 BRF1Q92994 677 aa16.63■□□□□ 0.25
SCAP-213ENST00000494938 RMDN3Q96TC7 470 aa16.63■□□□□ 0.25
SCAP-213ENST00000494938 TSEN34Q9BSV6 310 aaKnown RBP16.63■□□□□ 0.25
SCAP-213ENST00000494938 PHF24Q9UPV7 400 aa16.63■□□□□ 0.25
SCAP-213ENST00000494938 KBTBD13C9JR72 458 aa16.62■□□□□ 0.25
SCAP-213ENST00000494938 HOXA13P31271 388 aaPredicted RBP16.62■□□□□ 0.25
SCAP-213ENST00000494938 ADD1P35611 737 aaKnown RBP16.62■□□□□ 0.25
SCAP-213ENST00000494938 RCAN1P53805 252 aa16.62■□□□□ 0.25
SCAP-213ENST00000494938 FGD1P98174 961 aa16.62■□□□□ 0.25
SCAP-213ENST00000494938 PDE4DQ08499 809 aa16.62■□□□□ 0.25
SCAP-213ENST00000494938 KCNA10Q16322 511 aa16.62■□□□□ 0.25
SCAP-213ENST00000494938 RTN1Q16799 776 aa16.62■□□□□ 0.25
SCAP-213ENST00000494938 SLC39A5Q6ZMH5 540 aa16.62■□□□□ 0.25
SCAP-213ENST00000494938 FERMT2Q96AC1 680 aa16.62■□□□□ 0.25
SCAP-213ENST00000494938 IWS1Q96ST2 819 aa16.62■□□□□ 0.25
SCAP-213ENST00000494938 RBM28Q9NW13 759 aaKnown RBP16.62■□□□□ 0.25
SCAP-213ENST00000494938 GOLGA8AA7E2F4 631 aa16.61■□□□□ 0.25
SCAP-213ENST00000494938 GOLGA8BA8MQT2 603 aa16.61■□□□□ 0.25
SCAP-213ENST00000494938 GCOM1H8Y6P7 765 aaPredicted RBP16.61■□□□□ 0.25
SCAP-213ENST00000494938 DYNC1LI2O43237 492 aaPredicted RBP16.61■□□□□ 0.25
SCAP-213ENST00000494938 POLR2MP0CAP2 368 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms