RNA–Protein interactions for RNA: ENST00000494756.1

RPS27A-209, Transcript of ribosomal protein S27a, humanhuman

TSL 2

Gene RPS27A, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS27A-209ENST00000494756 TLL1O43897 1013 aa12.32□□□□□ -0.44
RPS27A-209ENST00000494756 ARHGEF15O94989 841 aa12.32□□□□□ -0.44
RPS27A-209ENST00000494756 TSPY3P0CV98 308 aa12.32□□□□□ -0.44
RPS27A-209ENST00000494756 TSPY8P0CW00 308 aa12.32□□□□□ -0.44
RPS27A-209ENST00000494756 MS4A1P11836 297 aa12.32□□□□□ -0.44
RPS27A-209ENST00000494756 ACTN1P12814 892 aa12.32□□□□□ -0.44
RPS27A-209ENST00000494756 RFC2P35250 354 aa12.32□□□□□ -0.44
RPS27A-209ENST00000494756 SLC1A4P43007 532 aa12.32□□□□□ -0.44
RPS27A-209ENST00000494756 PURAQ00577 322 aaKnown RBP12.32□□□□□ -0.44
RPS27A-209ENST00000494756 TAP1Q03518 808 aa12.32□□□□□ -0.44
RPS27A-209ENST00000494756 IKQ13123 557 aaPredicted RBP12.32□□□□□ -0.44
RPS27A-209ENST00000494756 MUM1L1Q5H9M0 696 aa12.32□□□□□ -0.44
RPS27A-209ENST00000494756 ERICH6BQ5W0A0 696 aa12.32□□□□□ -0.44
RPS27A-209ENST00000494756 KRT40Q6A162 431 aa12.32□□□□□ -0.44
RPS27A-209ENST00000494756 DEFB128Q7Z7B8 93 aa12.32□□□□□ -0.44
RPS27A-209ENST00000494756 PHOSPHO2Q8TCD6 241 aa12.32□□□□□ -0.44
RPS27A-209ENST00000494756 LRRCC1Q9C099 1032 aa12.32□□□□□ -0.44
RPS27A-209ENST00000494756 ECHDC1Q9NTX5 307 aa12.32□□□□□ -0.44
RPS27A-209ENST00000494756 POLR3EQ9NVU0 708 aa12.32□□□□□ -0.44
RPS27A-209ENST00000494756 ISY1Q9ULR0 285 aaKnown RBP12.32□□□□□ -0.44
RPS27A-209ENST00000494756 LOC102724159A0A0B4J2E5 919 aa12.31□□□□□ -0.44
RPS27A-209ENST00000494756 PITPNM1O00562 1244 aa12.31□□□□□ -0.44
RPS27A-209ENST00000494756 NEFLP07196 543 aa12.31□□□□□ -0.44
RPS27A-209ENST00000494756 ZFYP08048 801 aaPredicted RBP12.31□□□□□ -0.44
RPS27A-209ENST00000494756 PWP2Q15269 919 aaKnown RBP12.31□□□□□ -0.44
RPS27A-209ENST00000494756 TMEM31Q5JXX7 168 aa12.31□□□□□ -0.44
RPS27A-209ENST00000494756 KIAA1211Q6ZU35 1233 aa12.31□□□□□ -0.44
RPS27A-209ENST00000494756 ARNTL2Q8WYA1 636 aa12.31□□□□□ -0.44
RPS27A-209ENST00000494756 CERS4Q9HA82 394 aa12.31□□□□□ -0.44
RPS27A-209ENST00000494756 PRR12Q9ULL5 1215 aa12.31□□□□□ -0.44
RPS27A-209ENST00000494756 COL4A4P53420 1690 aaPredicted RBP12.31□□□□□ -0.44
RPS27A-209ENST00000494756 RBM47A0AV96 593 aaKnown RBP12.3□□□□□ -0.44
RPS27A-209ENST00000494756 M0R2C6 588 aa12.3□□□□□ -0.44
RPS27A-209ENST00000494756 RNF113AO15541 343 aaKnown RBP12.3□□□□□ -0.44
RPS27A-209ENST00000494756 MCCP23508 829 aa12.3□□□□□ -0.44
RPS27A-209ENST00000494756 CPT1AP50416 773 aa12.3□□□□□ -0.44
RPS27A-209ENST00000494756 TFAP4Q01664 338 aa12.3□□□□□ -0.44
RPS27A-209ENST00000494756 PDE4BQ07343 736 aa12.3□□□□□ -0.44
RPS27A-209ENST00000494756 PPP4R3BQ5MIZ7 849 aa12.3□□□□□ -0.44
RPS27A-209ENST00000494756 NSMFQ6X4W1 530 aa12.3□□□□□ -0.44
RPS27A-209ENST00000494756 KCTD1Q719H9 257 aa12.3□□□□□ -0.44
RPS27A-209ENST00000494756 HERC6Q8IVU3 1022 aa12.3□□□□□ -0.44
RPS27A-209ENST00000494756 IFNL3Q8IZI9 196 aa12.3□□□□□ -0.44
RPS27A-209ENST00000494756 HLA-CQ95604 372 aa12.3□□□□□ -0.44
RPS27A-209ENST00000494756 PURBQ96QR8 312 aaKnown RBP12.3□□□□□ -0.44
RPS27A-209ENST00000494756 MTG1Q9BT17 334 aaPredicted RBP12.3□□□□□ -0.44
RPS27A-209ENST00000494756 WDR11Q9BZH6 1224 aa12.3□□□□□ -0.44
RPS27A-209ENST00000494756 C11orf16Q9NQ32 467 aa12.3□□□□□ -0.44
RPS27A-209ENST00000494756 ADD3Q9UEY8 706 aaKnown RBP12.3□□□□□ -0.44
RPS27A-209ENST00000494756 CCPG1Q9ULG6 757 aa12.3□□□□□ -0.44
RPS27A-209ENST00000494756 PATL2C9JE40 543 aaKnown RBP12.29□□□□□ -0.44
RPS27A-209ENST00000494756 SMARCA5O60264 1052 aaPredicted RBP12.29□□□□□ -0.44
RPS27A-209ENST00000494756 LPXNO60711 386 aa12.29□□□□□ -0.44
RPS27A-209ENST00000494756 BAIAP3O94812 1187 aa12.29□□□□□ -0.44
RPS27A-209ENST00000494756 APPP05067 770 aa12.29□□□□□ -0.44
RPS27A-209ENST00000494756 ICAM1P05362 532 aa12.29□□□□□ -0.44
RPS27A-209ENST00000494756 IQCF3P0C7M6 154 aa12.29□□□□□ -0.44
RPS27A-209ENST00000494756 ALDH5A1P51649 535 aaPredicted RBP12.29□□□□□ -0.44
RPS27A-209ENST00000494756 SNAP25P60880 206 aa12.29□□□□□ -0.44
RPS27A-209ENST00000494756 GRB10Q13322 594 aa12.29□□□□□ -0.44
RPS27A-209ENST00000494756 RCSD1Q6JBY9 416 aa12.29□□□□□ -0.44
RPS27A-209ENST00000494756 NFRKBQ6P4R8 1299 aa12.29□□□□□ -0.44
RPS27A-209ENST00000494756 RASGRP2Q7LDG7 609 aa12.29□□□□□ -0.44
RPS27A-209ENST00000494756 NACAP1Q9BZK3 213 aa12.29□□□□□ -0.44
RPS27A-209ENST00000494756 RANBP17Q9H2T7 1088 aaKnown RBP12.29□□□□□ -0.44
RPS27A-209ENST00000494756 KIF28PB7ZC32 967 aa12.28□□□□□ -0.44
RPS27A-209ENST00000494756 GPR37L1O60883 481 aa12.28□□□□□ -0.44
RPS27A-209ENST00000494756 SLC3A2P08195 630 aaKnown RBP12.28□□□□□ -0.44
RPS27A-209ENST00000494756 MYL3P08590 195 aa12.28□□□□□ -0.44
RPS27A-209ENST00000494756 PPARAQ07869 468 aa12.28□□□□□ -0.44
RPS27A-209ENST00000494756 BAATQ14032 418 aaPredicted RBP12.28□□□□□ -0.44
RPS27A-209ENST00000494756 NBPF20Q3BBV1 942 aa12.28□□□□□ -0.44
RPS27A-209ENST00000494756 FAM47CQ5HY64 1035 aa12.28□□□□□ -0.44
RPS27A-209ENST00000494756 C20orf194Q5TEA3 1177 aa12.28□□□□□ -0.44
RPS27A-209ENST00000494756 SPRED2Q7Z698 418 aa12.28□□□□□ -0.44
RPS27A-209ENST00000494756 OR6J1Q8NGC5 347 aa12.28□□□□□ -0.44
RPS27A-209ENST00000494756 KHSRPQ92945 711 aaKnown RBP eCLIP12.28□□□□□ -0.444e-6■□□□□ 11.1
RPS27A-209ENST00000494756 CHMP4CQ96CF2 233 aa12.28□□□□□ -0.44
RPS27A-209ENST00000494756 GPATCH3Q96I76 525 aa12.28□□□□□ -0.44
RPS27A-209ENST00000494756 CHMP4BQ9H444 224 aaKnown RBP12.28□□□□□ -0.44
RPS27A-209ENST00000494756 GPHNQ9NQX3 736 aaPredicted RBP12.28□□□□□ -0.44
RPS27A-209ENST00000494756 STX8Q9UNK0 236 aa12.28□□□□□ -0.44
RPS27A-209ENST00000494756 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.28□□□□□ -0.44
RPS27A-209ENST00000494756 PTPRSQ13332 1948 aa12.28□□□□□ -0.44
RPS27A-209ENST00000494756 RAD50Q92878 1312 aa12.28□□□□□ -0.44
RPS27A-209ENST00000494756 A6NJR5 290 aa12.27□□□□□ -0.45
RPS27A-209ENST00000494756 NFIBO00712 420 aa12.27□□□□□ -0.45
RPS27A-209ENST00000494756 NKRFO15226 690 aaKnown RBP eCLIP12.27□□□□□ -0.45
RPS27A-209ENST00000494756 KPNA6O60684 536 aa12.27□□□□□ -0.45
RPS27A-209ENST00000494756 EDNRBP24530 442 aa12.27□□□□□ -0.45
RPS27A-209ENST00000494756 NOVP48745 357 aa12.27□□□□□ -0.45
RPS27A-209ENST00000494756 PTPN11Q06124 597 aaPredicted RBP12.27□□□□□ -0.45
RPS27A-209ENST00000494756 BFSP2Q13515 415 aa12.27□□□□□ -0.45
RPS27A-209ENST00000494756 PPP2R5BQ15173 497 aa12.27□□□□□ -0.45
RPS27A-209ENST00000494756 LRRFIP1Q32MZ4 808 aaKnown RBP12.27□□□□□ -0.45
RPS27A-209ENST00000494756 BRDTQ58F21 947 aaPredicted RBP12.27□□□□□ -0.45
RPS27A-209ENST00000494756 TSHZ3Q63HK5 1081 aa12.27□□□□□ -0.45
RPS27A-209ENST00000494756 RETREG2Q8NC44 543 aa12.27□□□□□ -0.45
RPS27A-209ENST00000494756 FTOQ9C0B1 505 aaKnown RBP eCLIP12.27□□□□□ -0.45
RPS27A-209ENST00000494756 NAPBQ9H115 298 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms