RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 MYL1P05976 194 aa17.09■□□□□ 0.33
SDF4-207ENST00000494748 CCNE1P24864 410 aa17.09■□□□□ 0.33
SDF4-207ENST00000494748 SEMA3FQ13275 785 aa17.09■□□□□ 0.33
SDF4-207ENST00000494748 CCDC88AQ3V6T2 1871 aa17.09■□□□□ 0.33
SDF4-207ENST00000494748 CCSER1Q9C0I3 900 aa17.09■□□□□ 0.33
SDF4-207ENST00000494748 ZNHIT6Q9NWK9 470 aaKnown RBP17.09■□□□□ 0.33
SDF4-207ENST00000494748 MAGEC2Q9UBF1 373 aaPredicted RBP17.09■□□□□ 0.33
SDF4-207ENST00000494748 ZNF804BA4D1E1 1349 aa17.09■□□□□ 0.33
SDF4-207ENST00000494748 SHTN1A0MZ66 631 aa17.09■□□□□ 0.33
SDF4-207ENST00000494748 FAM153BP0C7A2 387 aa17.09■□□□□ 0.33
SDF4-207ENST00000494748 FAM153CQ494X1 144 aa17.09■□□□□ 0.33
SDF4-207ENST00000494748 POTEDQ86YR6 584 aa17.09■□□□□ 0.33
SDF4-207ENST00000494748 RASGRP4Q8TDF6 673 aa17.09■□□□□ 0.33
SDF4-207ENST00000494748 BRIP1Q9BX63 1249 aa17.09■□□□□ 0.33
SDF4-207ENST00000494748 IFIH1Q9BYX4 1025 aaKnown RBP17.09■□□□□ 0.33
SDF4-207ENST00000494748 FAM153AQ9UHL3 310 aa17.09■□□□□ 0.33
SDF4-207ENST00000494748 ZBTB1Q9Y2K1 713 aa17.09■□□□□ 0.33
SDF4-207ENST00000494748 ATAD5Q96QE3 1844 aa17.09■□□□□ 0.33
SDF4-207ENST00000494748 FSBPO95073 299 aa17.09■□□□□ 0.33
SDF4-207ENST00000494748 STARD3NLO95772 234 aa17.09■□□□□ 0.33
SDF4-207ENST00000494748 KRT14P02533 472 aa17.09■□□□□ 0.33
SDF4-207ENST00000494748 INPP5BP32019 993 aa17.09■□□□□ 0.33
SDF4-207ENST00000494748 STK4Q13043 487 aa17.09■□□□□ 0.33
SDF4-207ENST00000494748 NNTQ13423 1086 aa17.09■□□□□ 0.33
SDF4-207ENST00000494748 CCDC96Q2M329 555 aa17.09■□□□□ 0.33
SDF4-207ENST00000494748 ASTE1Q2TB18 679 aaPredicted RBP17.09■□□□□ 0.33
SDF4-207ENST00000494748 PLIN2Q99541 437 aa17.09■□□□□ 0.33
SDF4-207ENST00000494748 GDF3Q9NR23 364 aa17.09■□□□□ 0.33
SDF4-207ENST00000494748 PJA2O43164 708 aa17.08■□□□□ 0.33
SDF4-207ENST00000494748 KIF11P52732 1056 aa17.08■□□□□ 0.33
SDF4-207ENST00000494748 KDM7AQ6ZMT4 941 aa17.08■□□□□ 0.33
SDF4-207ENST00000494748 HYOU1Q9Y4L1 999 aa17.08■□□□□ 0.33
SDF4-207ENST00000494748 GLI1P08151 1106 aa17.08■□□□□ 0.32
SDF4-207ENST00000494748 BLIDQ8IZY5 108 aa17.08■□□□□ 0.32
SDF4-207ENST00000494748 RNPC3Q96LT9 517 aaKnown RBP17.08■□□□□ 0.32
SDF4-207ENST00000494748 PSMB7Q99436 277 aa17.08■□□□□ 0.32
SDF4-207ENST00000494748 CARD10Q9BWT7 1032 aa17.08■□□□□ 0.32
SDF4-207ENST00000494748 TACC1O75410 805 aa17.08■□□□□ 0.32
SDF4-207ENST00000494748 SLC35G1Q2M3R5 365 aa17.08■□□□□ 0.32
SDF4-207ENST00000494748 KLHDC7AQ5VTJ3 777 aa17.08■□□□□ 0.32
SDF4-207ENST00000494748 RCSD1Q6JBY9 416 aa17.08■□□□□ 0.32
SDF4-207ENST00000494748 CCDC42Q96M95 316 aa17.08■□□□□ 0.32
SDF4-207ENST00000494748 FCER1AP12319 257 aa17.07■□□□□ 0.32
SDF4-207ENST00000494748 TCP1P17987 556 aaKnown RBP17.07■□□□□ 0.32
SDF4-207ENST00000494748 EIF4A3P38919 411 aaKnown RBP17.07■□□□□ 0.32
SDF4-207ENST00000494748 MATR3P43243 847 aaKnown RBP eCLIP17.07■□□□□ 0.32
SDF4-207ENST00000494748 IQCA1Q86XH1 822 aa17.07■□□□□ 0.32
SDF4-207ENST00000494748 MTMR8Q96EF0 704 aa17.07■□□□□ 0.32
SDF4-207ENST00000494748 SEMA6BQ9H3T3 888 aa17.07■□□□□ 0.32
SDF4-207ENST00000494748 POLD4Q9HCU8 107 aa17.07■□□□□ 0.32
SDF4-207ENST00000494748 MYH4Q9Y623 1939 aa17.07■□□□□ 0.32
SDF4-207ENST00000494748 ZSCAN5CA6NGD5 496 aaPredicted RBP17.07■□□□□ 0.32
SDF4-207ENST00000494748 WTIPA6NIX2 430 aaPredicted RBP17.07■□□□□ 0.32
SDF4-207ENST00000494748 MYO1FO00160 1098 aa17.07■□□□□ 0.32
SDF4-207ENST00000494748 KIAA0895Q8NCT3 520 aa17.07■□□□□ 0.32
SDF4-207ENST00000494748 NOC4LQ9BVI4 516 aaKnown RBP17.07■□□□□ 0.32
SDF4-207ENST00000494748 IPO7O95373 1038 aaKnown RBP17.07■□□□□ 0.32
SDF4-207ENST00000494748 CCDC70Q6NSX1 233 aa17.07■□□□□ 0.32
SDF4-207ENST00000494748 BAP1Q92560 729 aa17.07■□□□□ 0.32
SDF4-207ENST00000494748 GPKOWQ92917 476 aaPredicted RBP eCLIP17.07■□□□□ 0.32
SDF4-207ENST00000494748 MS4A14Q96JA4 679 aa17.07■□□□□ 0.32
SDF4-207ENST00000494748 TRIM9Q9C026 710 aa17.07■□□□□ 0.32
SDF4-207ENST00000494748 PCDHA4Q9UN74 947 aa17.07■□□□□ 0.32
SDF4-207ENST00000494748 ORC4O43929 436 aa17.06■□□□□ 0.32
SDF4-207ENST00000494748 LSP1P33241 339 aa17.06■□□□□ 0.32
SDF4-207ENST00000494748 CARSP49589 748 aaKnown RBP17.06■□□□□ 0.32
SDF4-207ENST00000494748 NAP1L1P55209 391 aaKnown RBP17.06■□□□□ 0.32
SDF4-207ENST00000494748 SUSD4Q5VX71 490 aa17.06■□□□□ 0.32
SDF4-207ENST00000494748 KCTD16Q68DU8 428 aa17.06■□□□□ 0.32
SDF4-207ENST00000494748 DTHD1Q6ZMT9 781 aa17.06■□□□□ 0.32
SDF4-207ENST00000494748 XIRP1Q702N8 1843 aaKnown RBP17.06■□□□□ 0.32
SDF4-207ENST00000494748 ERVV-1B6SEH8 477 aa17.06■□□□□ 0.32
SDF4-207ENST00000494748 MEFVO15553 781 aaPredicted RBP17.06■□□□□ 0.32
SDF4-207ENST00000494748 PCP11498 1178 aaKnown RBP17.06■□□□□ 0.32
SDF4-207ENST00000494748 APBA1Q02410 837 aa17.06■□□□□ 0.32
SDF4-207ENST00000494748 SPA17Q15506 151 aa17.06■□□□□ 0.32
SDF4-207ENST00000494748 COBLL1Q53SF7 1204 aa17.06■□□□□ 0.32
SDF4-207ENST00000494748 C2CD5Q86YS7 1000 aa17.06■□□□□ 0.32
SDF4-207ENST00000494748 MREGQ8N565 214 aa17.06■□□□□ 0.32
SDF4-207ENST00000494748 PCDHA6Q9UN73 950 aa17.06■□□□□ 0.32
SDF4-207ENST00000494748 PCDHA8Q9Y5H6 950 aa17.06■□□□□ 0.32
SDF4-207ENST00000494748 HSF2BPO75031 334 aa17.05■□□□□ 0.32
SDF4-207ENST00000494748 ATP1A2P50993 1020 aa17.05■□□□□ 0.32
SDF4-207ENST00000494748 NAA35Q5VZE5 725 aa17.05■□□□□ 0.32
SDF4-207ENST00000494748 CD302Q8IX05 232 aa17.05■□□□□ 0.32
SDF4-207ENST00000494748 NDUFAB1O14561 156 aa17.05■□□□□ 0.32
SDF4-207ENST00000494748 PLCG1P19174 1290 aa17.05■□□□□ 0.32
SDF4-207ENST00000494748 CAPN7Q9Y6W3 813 aa17.05■□□□□ 0.32
SDF4-207ENST00000494748 USO1O60763 962 aaKnown RBP17.05■□□□□ 0.32
SDF4-207ENST00000494748 ATF3P18847 181 aa17.05■□□□□ 0.32
SDF4-207ENST00000494748 GUCY1A3Q02108 690 aa17.05■□□□□ 0.32
SDF4-207ENST00000494748 FAM47AQ5JRC9 791 aa17.05■□□□□ 0.32
SDF4-207ENST00000494748 FKBP15Q5T1M5 1219 aa17.05■□□□□ 0.32
SDF4-207ENST00000494748 YTHDF3Q7Z739 585 aaKnown RBP17.05■□□□□ 0.32
SDF4-207ENST00000494748 HPS3Q969F9 1004 aa17.05■□□□□ 0.32
SDF4-207ENST00000494748 C7orf25Q9BPX7 421 aa17.05■□□□□ 0.32
SDF4-207ENST00000494748 EPN3Q9H201 632 aa17.05■□□□□ 0.32
SDF4-207ENST00000494748 MAST2Q6P0Q8 1798 aa17.04■□□□□ 0.32
SDF4-207ENST00000494748 CLSTN1O94985 981 aa17.04■□□□□ 0.32
SDF4-207ENST00000494748 MTIF2P46199 727 aaKnown RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms