RNA–Protein interactions for RNA: ENST00000494610.1

CSNK1E-212, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-212ENST00000494610 TRERF1Q96PN7 1200 aa13.88□□□□□ -0.19
CSNK1E-212ENST00000494610 ACAD9Q9H845 621 aa13.88□□□□□ -0.19
CSNK1E-212ENST00000494610 ZBBXA8MT70 800 aa13.87□□□□□ -0.19
CSNK1E-212ENST00000494610 RNF113AO15541 343 aaKnown RBP13.87□□□□□ -0.19
CSNK1E-212ENST00000494610 TTLL1O95922 423 aa13.87□□□□□ -0.19
CSNK1E-212ENST00000494610 NKX3-2P78367 333 aa13.87□□□□□ -0.19
CSNK1E-212ENST00000494610 TFAP4Q01664 338 aa13.87□□□□□ -0.19
CSNK1E-212ENST00000494610 IKQ13123 557 aaPredicted RBP13.87□□□□□ -0.19
CSNK1E-212ENST00000494610 RAB30Q15771 203 aa13.87□□□□□ -0.19
CSNK1E-212ENST00000494610 PPP2R2DQ66LE6 453 aa13.87□□□□□ -0.19
CSNK1E-212ENST00000494610 DEFB128Q7Z7B8 93 aa13.87□□□□□ -0.19
CSNK1E-212ENST00000494610 KBTBD3Q8NAB2 608 aa13.87□□□□□ -0.19
CSNK1E-212ENST00000494610 GMCL1P1Q8NEA9 526 aa13.87□□□□□ -0.19
CSNK1E-212ENST00000494610 APPBP2Q92624 585 aa13.87□□□□□ -0.19
CSNK1E-212ENST00000494610 FBXO40Q9UH90 709 aa13.87□□□□□ -0.19
CSNK1E-212ENST00000494610 TSPY3P0CV98 308 aa13.86□□□□□ -0.19
CSNK1E-212ENST00000494610 TSPY8P0CW00 308 aa13.86□□□□□ -0.19
CSNK1E-212ENST00000494610 BMP1P13497 986 aa13.86□□□□□ -0.19
CSNK1E-212ENST00000494610 CTDSPL2Q05D32 466 aa13.86□□□□□ -0.19
CSNK1E-212ENST00000494610 NEDD1Q8NHV4 660 aa13.86□□□□□ -0.19
CSNK1E-212ENST00000494610 AP5M1Q9H0R1 490 aa13.86□□□□□ -0.19
CSNK1E-212ENST00000494610 SLC4A7Q9Y6M7 1214 aa13.86□□□□□ -0.19
CSNK1E-212ENST00000494610 PATL2C9JE40 543 aaKnown RBP13.85□□□□□ -0.19
CSNK1E-212ENST00000494610 FOXP2O15409 715 aa13.85□□□□□ -0.19
CSNK1E-212ENST00000494610 CA3P07451 260 aa13.85□□□□□ -0.19
CSNK1E-212ENST00000494610 SDSP20132 328 aa13.85□□□□□ -0.19
CSNK1E-212ENST00000494610 SLC16A2P36021 539 aa13.85□□□□□ -0.19
CSNK1E-212ENST00000494610 STAT2P52630 851 aa13.85□□□□□ -0.19
CSNK1E-212ENST00000494610 OAZ1P54368 228 aa13.85□□□□□ -0.19
CSNK1E-212ENST00000494610 TTBK2Q6IQ55 1244 aa13.85□□□□□ -0.19
CSNK1E-212ENST00000494610 GIMAP6Q6P9H5 292 aa13.85□□□□□ -0.19
CSNK1E-212ENST00000494610 NSMFQ6X4W1 530 aa13.85□□□□□ -0.19
CSNK1E-212ENST00000494610 KIAA1211Q6ZU35 1233 aa13.85□□□□□ -0.19
CSNK1E-212ENST00000494610 STAG1Q8WVM7 1258 aa13.85□□□□□ -0.19
CSNK1E-212ENST00000494610 RUFY2Q8WXA3 655 aa13.85□□□□□ -0.19
CSNK1E-212ENST00000494610 RILPL2Q969X0 211 aa13.85□□□□□ -0.19
CSNK1E-212ENST00000494610 ALDH8A1Q9H2A2 487 aaPredicted RBP13.85□□□□□ -0.19
CSNK1E-212ENST00000494610 UPF2Q9HAU5 1272 aaKnown RBP13.85□□□□□ -0.19
CSNK1E-212ENST00000494610 IL17RBQ9NRM6 502 aa13.85□□□□□ -0.19
CSNK1E-212ENST00000494610 CYP39A1Q9NYL5 469 aa13.85□□□□□ -0.19
CSNK1E-212ENST00000494610 PRR12Q9ULL5 1215 aa13.85□□□□□ -0.19
CSNK1E-212ENST00000494610 TET1Q8NFU7 2136 aa13.85□□□□□ -0.19
CSNK1E-212ENST00000494610 ATP2A2P16615 1042 aaKnown RBP13.84□□□□□ -0.19
CSNK1E-212ENST00000494610 SLC1A4P43007 532 aa13.84□□□□□ -0.19
CSNK1E-212ENST00000494610 SKIV2LQ15477 1246 aaKnown RBP13.84□□□□□ -0.19
CSNK1E-212ENST00000494610 TMCO2Q7Z6W1 182 aaPredicted RBP13.84□□□□□ -0.19
CSNK1E-212ENST00000494610 FSD1Q9BTV5 496 aa13.84□□□□□ -0.19
CSNK1E-212ENST00000494610 EPHX3Q9H6B9 360 aa13.84□□□□□ -0.19
CSNK1E-212ENST00000494610 STX8Q9UNK0 236 aa13.84□□□□□ -0.19
CSNK1E-212ENST00000494610 RAD50Q92878 1312 aa13.84□□□□□ -0.19
CSNK1E-212ENST00000494610 ASB14A6NK59 587 aa13.83□□□□□ -0.2
CSNK1E-212ENST00000494610 NFIBO00712 420 aa13.83□□□□□ -0.2
CSNK1E-212ENST00000494610 MYL3P08590 195 aa13.83□□□□□ -0.2
CSNK1E-212ENST00000494610 PPARAQ07869 468 aa13.83□□□□□ -0.2
CSNK1E-212ENST00000494610 BAATQ14032 418 aaPredicted RBP13.83□□□□□ -0.2
CSNK1E-212ENST00000494610 COPS5Q92905 334 aa13.83□□□□□ -0.2
CSNK1E-212ENST00000494610 KHSRPQ92945 711 aaKnown RBP eCLIP13.83□□□□□ -0.2
CSNK1E-212ENST00000494610 GMCL1Q96IK5 515 aa13.83□□□□□ -0.2
CSNK1E-212ENST00000494610 DIAPH3Q9NSV4 1193 aa13.83□□□□□ -0.2
CSNK1E-212ENST00000494610 MTCH2Q9Y6C9 303 aa13.83□□□□□ -0.2
CSNK1E-212ENST00000494610 PLIN4Q96Q06 1357 aa13.83□□□□□ -0.2
CSNK1E-212ENST00000494610 PTPRSQ13332 1948 aa13.82□□□□□ -0.2
CSNK1E-212ENST00000494610 WDFY4Q6ZS81 3184 aa13.82□□□□□ -0.2
CSNK1E-212ENST00000494610 CABYRO75952 493 aa13.82□□□□□ -0.2
CSNK1E-212ENST00000494610 ZFYP08048 801 aaPredicted RBP13.82□□□□□ -0.2
CSNK1E-212ENST00000494610 C8orf34Q49A92 452 aa13.82□□□□□ -0.2
CSNK1E-212ENST00000494610 IQSEC1Q6DN90 963 aa13.82□□□□□ -0.2
CSNK1E-212ENST00000494610 SLC30A10Q6XR72 485 aa13.82□□□□□ -0.2
CSNK1E-212ENST00000494610 IL27Q8NEV9 243 aa13.82□□□□□ -0.2
CSNK1E-212ENST00000494610 CHURC1Q8WUH1 139 aa13.82□□□□□ -0.2
CSNK1E-212ENST00000494610 CCPG1Q9ULG6 757 aa13.82□□□□□ -0.2
CSNK1E-212ENST00000494610 PCDHA11Q9Y5I1 949 aa13.82□□□□□ -0.2
CSNK1E-212ENST00000494610 TNKSO95271 1327 aa13.82□□□□□ -0.2
CSNK1E-212ENST00000494610 FRMPD2Q68DX3 1309 aaPredicted RBP13.82□□□□□ -0.2
CSNK1E-212ENST00000494610 REC8O95072 547 aa13.81□□□□□ -0.2
CSNK1E-212ENST00000494610 CHMP4BP1P59074 171 aa13.81□□□□□ -0.2
CSNK1E-212ENST00000494610 PURAQ00577 322 aaKnown RBP13.81□□□□□ -0.2
CSNK1E-212ENST00000494610 NBPF20Q3BBV1 942 aa13.81□□□□□ -0.2
CSNK1E-212ENST00000494610 FAM47CQ5HY64 1035 aa13.81□□□□□ -0.2
CSNK1E-212ENST00000494610 VPS53Q5VIR6 699 aa13.81□□□□□ -0.2
CSNK1E-212ENST00000494610 RCSD1Q6JBY9 416 aa13.81□□□□□ -0.2
CSNK1E-212ENST00000494610 FAM160B2Q86V87 743 aa13.81□□□□□ -0.2
CSNK1E-212ENST00000494610 ARNTL2Q8WYA1 636 aa13.81□□□□□ -0.2
CSNK1E-212ENST00000494610 BACH2Q9BYV9 841 aa13.81□□□□□ -0.2
CSNK1E-212ENST00000494610 WDR11Q9BZH6 1224 aa13.81□□□□□ -0.2
CSNK1E-212ENST00000494610 NAPBQ9H115 298 aa13.81□□□□□ -0.2
CSNK1E-212ENST00000494610 MTIF3Q9H2K0 278 aaKnown RBP13.81□□□□□ -0.2
CSNK1E-212ENST00000494610 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.81□□□□□ -0.2
CSNK1E-212ENST00000494610 BRWD1Q9NSI6 2320 aa13.81□□□□□ -0.2
CSNK1E-212ENST00000494610 TRIP12Q14669 1992 aaPredicted RBP13.8□□□□□ -0.2
CSNK1E-212ENST00000494610 C5orf42Q9H799 3197 aa13.8□□□□□ -0.2
CSNK1E-212ENST00000494610 LCHNA4D1U4 455 aa13.8□□□□□ -0.2
CSNK1E-212ENST00000494610 ZEB2O60315 1214 aa13.8□□□□□ -0.2
CSNK1E-212ENST00000494610 GNAT2P19087 354 aa13.8□□□□□ -0.2
CSNK1E-212ENST00000494610 CALML3P27482 149 aa13.8□□□□□ -0.2
CSNK1E-212ENST00000494610 PLA2G5P39877 138 aa13.8□□□□□ -0.2
CSNK1E-212ENST00000494610 ALDH5A1P51649 535 aaPredicted RBP13.8□□□□□ -0.2
CSNK1E-212ENST00000494610 TAP1Q03518 808 aa13.8□□□□□ -0.2
CSNK1E-212ENST00000494610 PDE4BQ07343 736 aa13.8□□□□□ -0.2
CSNK1E-212ENST00000494610 CCDC96Q2M329 555 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms