RNA–Protein interactions for RNA: ENST00000493894.1

RHBDD3-206, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 999 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-206ENST00000493894 ASPRV1Q53RT3 343 aa27.72■■■□□ 2.03
RHBDD3-206ENST00000493894 FAM109BQ6ICB4 259 aaPredicted RBP27.72■■■□□ 2.03
RHBDD3-206ENST00000493894 KIAA1211Q6ZU35 1233 aa27.72■■■□□ 2.03
RHBDD3-206ENST00000493894 ENAHQ8N8S7 591 aaPredicted RBP27.72■■■□□ 2.03
RHBDD3-206ENST00000493894 MPHOSPH6Q99547 160 aaKnown RBP27.72■■■□□ 2.03
RHBDD3-206ENST00000493894 UBAC1Q9BSL1 405 aa27.72■■■□□ 2.03
RHBDD3-206ENST00000493894 IRX6P78412 446 aaPredicted RBP27.71■■■□□ 2.03
RHBDD3-206ENST00000493894 USH1GQ495M9 461 aa27.71■■■□□ 2.03
RHBDD3-206ENST00000493894 CXCL17Q6UXB2 119 aa27.71■■■□□ 2.03
RHBDD3-206ENST00000493894 FAM126BQ8IXS8 530 aa27.71■■■□□ 2.03
RHBDD3-206ENST00000493894 RNPC3Q96LT9 517 aaKnown RBP27.71■■■□□ 2.03
RHBDD3-206ENST00000493894 UBA5Q9GZZ9 404 aa27.71■■■□□ 2.03
RHBDD3-206ENST00000493894 CPVLQ9H3G5 476 aa27.71■■■□□ 2.03
RHBDD3-206ENST00000493894 ZSWIM5Q9P217 1185 aa27.71■■■□□ 2.03
RHBDD3-206ENST00000493894 STXBP5LQ9Y2K9 1186 aa27.71■■■□□ 2.03
RHBDD3-206ENST00000493894 TIMP1P01033 207 aa27.7■■■□□ 2.02
RHBDD3-206ENST00000493894 RPS6P62753 249 aaKnown RBP27.7■■■□□ 2.02
RHBDD3-206ENST00000493894 CDC37Q16543 378 aaPredicted RBP27.7■■■□□ 2.02
RHBDD3-206ENST00000493894 ZNF697Q5TEC3 545 aa27.7■■■□□ 2.02
RHBDD3-206ENST00000493894 LAMA2P24043 3122 aaKnown RBP27.7■■■□□ 2.02
RHBDD3-206ENST00000493894 PTGS1P23219 599 aa27.69■■■□□ 2.02
RHBDD3-206ENST00000493894 EPHB4P54760 987 aa27.69■■■□□ 2.02
RHBDD3-206ENST00000493894 DUSP28Q4G0W2 176 aa27.69■■■□□ 2.02
RHBDD3-206ENST00000493894 DNERQ8NFT8 737 aa27.69■■■□□ 2.02
RHBDD3-206ENST00000493894 RUFY2Q8WXA3 655 aa27.69■■■□□ 2.02
RHBDD3-206ENST00000493894 COL6A3P12111 3177 aa27.68■■■□□ 2.02
RHBDD3-206ENST00000493894 SMAD3P84022 425 aaKnown RBP27.68■■■□□ 2.02
RHBDD3-206ENST00000493894 PDE4DQ08499 809 aa27.68■■■□□ 2.02
RHBDD3-206ENST00000493894 ABCB11O95342 1321 aa27.67■■■□□ 2.02
RHBDD3-206ENST00000493894 B4DLN1 442 aa27.67■■■□□ 2.02
RHBDD3-206ENST00000493894 DHX16O60231 1041 aaKnown RBP27.67■■■□□ 2.02
RHBDD3-206ENST00000493894 PARP1P09874 1014 aaKnown RBP27.67■■■□□ 2.02
RHBDD3-206ENST00000493894 MRPL12P52815 198 aaKnown RBP27.67■■■□□ 2.02
RHBDD3-206ENST00000493894 TMEM63BQ5T3F8 832 aa27.67■■■□□ 2.02
RHBDD3-206ENST00000493894 IFIT1BQ5T764 474 aaKnown RBP27.67■■■□□ 2.02
RHBDD3-206ENST00000493894 MFSD5Q6N075 450 aa27.67■■■□□ 2.02
RHBDD3-206ENST00000493894 ADGRF4Q8IZF3 695 aa27.67■■■□□ 2.02
RHBDD3-206ENST00000493894 SEZ6LQ9BYH1 1024 aa27.67■■■□□ 2.02
RHBDD3-206ENST00000493894 WDR11Q9BZH6 1224 aa27.67■■■□□ 2.02
RHBDD3-206ENST00000493894 ITGA7Q13683 1181 aa27.66■■■□□ 2.02
RHBDD3-206ENST00000493894 SLC43A3Q8NBI5 491 aa27.66■■■□□ 2.02
RHBDD3-206ENST00000493894 SLC17A8Q8NDX2 589 aa27.66■■■□□ 2.02
RHBDD3-206ENST00000493894 RGS22Q8NE09 1264 aa27.66■■■□□ 2.02
RHBDD3-206ENST00000493894 MAF1Q9H063 256 aa27.66■■■□□ 2.02
RHBDD3-206ENST00000493894 RBM47A0AV96 593 aaKnown RBP27.65■■■□□ 2.02
RHBDD3-206ENST00000493894 CD4P01730 458 aa27.65■■■□□ 2.02
RHBDD3-206ENST00000493894 EDNRBP24530 442 aa27.65■■■□□ 2.02
RHBDD3-206ENST00000493894 TRDNQ13061 729 aa27.65■■■□□ 2.02
RHBDD3-206ENST00000493894 PPIGQ13427 754 aaKnown RBP eCLIP27.65■■■□□ 2.024e-6■□□□□ 10.7
RHBDD3-206ENST00000493894 PPP2R5BQ15173 497 aa27.65■■■□□ 2.02
RHBDD3-206ENST00000493894 FAM161BQ96MY7 647 aa27.65■■■□□ 2.02
RHBDD3-206ENST00000493894 PPP1R12CQ9BZL4 782 aa27.65■■■□□ 2.02
RHBDD3-206ENST00000493894 CHMLP26374 656 aa27.64■■■□□ 2.02
RHBDD3-206ENST00000493894 CPT1AP50416 773 aa27.64■■■□□ 2.02
RHBDD3-206ENST00000493894 QRICH1Q2TAL8 776 aa27.64■■■□□ 2.02
RHBDD3-206ENST00000493894 TMEM199Q8N511 208 aa27.64■■■□□ 2.02
RHBDD3-206ENST00000493894 GUCD1Q96NT3 240 aa27.64■■■□□ 2.02
RHBDD3-206ENST00000493894 OR6J1Q8NGC5 347 aa27.63■■■□□ 2.01
RHBDD3-206ENST00000493894 SCFD2Q8WU76 684 aa27.63■■■□□ 2.01
RHBDD3-206ENST00000493894 POLR3EQ9NVU0 708 aa27.63■■■□□ 2.01
RHBDD3-206ENST00000493894 U3KPZ7 1027 aaPredicted RBP27.63■■■□□ 2.01
RHBDD3-206ENST00000493894 NKRFO15226 690 aaKnown RBP eCLIP27.62■■■□□ 2.01
RHBDD3-206ENST00000493894 SEC23AQ15436 765 aa27.62■■■□□ 2.01
RHBDD3-206ENST00000493894 FBXO11Q86XK2 927 aa27.62■■■□□ 2.01
RHBDD3-206ENST00000493894 MCF2L2Q86YR7 1114 aa27.62■■■□□ 2.01
RHBDD3-206ENST00000493894 JMJD4Q9H9V9 463 aa27.62■■■□□ 2.01
RHBDD3-206ENST00000493894 GRIN2DO15399 1336 aa27.62■■■□□ 2.01
RHBDD3-206ENST00000493894 MYH6P13533 1939 aa27.61■■■□□ 2.01
RHBDD3-206ENST00000493894 PSMC6P62333 389 aa27.61■■■□□ 2.01
RHBDD3-206ENST00000493894 BRDTQ58F21 947 aaPredicted RBP27.61■■■□□ 2.01
RHBDD3-206ENST00000493894 CYB5R4Q7L1T6 521 aa27.61■■■□□ 2.01
RHBDD3-206ENST00000493894 BUD13Q9BRD0 619 aaKnown RBP eCLIP27.61■■■□□ 2.01
RHBDD3-206ENST00000493894 MRPL11Q9Y3B7 192 aaKnown RBP27.61■■■□□ 2.01
RHBDD3-206ENST00000493894 CYP21A2P08686 494 aa27.6■■■□□ 2.01
RHBDD3-206ENST00000493894 CSF2RAP15509 400 aa27.6■■■□□ 2.01
RHBDD3-206ENST00000493894 PTH1RQ03431 593 aa27.6■■■□□ 2.01
RHBDD3-206ENST00000493894 RALYLQ86SE5 291 aaKnown RBP27.6■■■□□ 2.01
RHBDD3-206ENST00000493894 HIPK3Q9H422 1215 aa27.6■■■□□ 2.01
RHBDD3-206ENST00000493894 VAT1LQ9HCJ6 419 aa27.6■■■□□ 2.01
RHBDD3-206ENST00000493894 PURAQ00577 322 aaKnown RBP27.59■■■□□ 2.01
RHBDD3-206ENST00000493894 PSRC1Q6PGN9 363 aaPredicted RBP27.59■■■□□ 2.01
RHBDD3-206ENST00000493894 STAG2Q8N3U4 1231 aa27.59■■■□□ 2.01
RHBDD3-206ENST00000493894 SYTL5Q8TDW5 730 aaPredicted RBP27.59■■■□□ 2.01
RHBDD3-206ENST00000493894 GPHNQ9NQX3 736 aaPredicted RBP27.59■■■□□ 2.01
RHBDD3-206ENST00000493894 TMEM265A0A087WTH1 108 aa27.58■■■□□ 2.01
RHBDD3-206ENST00000493894 ERICH2A1L162 156 aa27.58■■■□□ 2.01
RHBDD3-206ENST00000493894 KLRF2D3W0D1 207 aa27.58■■■□□ 2.01
RHBDD3-206ENST00000493894 SGSM2O43147 1006 aa27.58■■■□□ 2.01
RHBDD3-206ENST00000493894 B4GALT4O60513 344 aa27.58■■■□□ 2.01
RHBDD3-206ENST00000493894 MYL3P08590 195 aa27.58■■■□□ 2.01
RHBDD3-206ENST00000493894 TXNP10599 105 aaKnown RBP27.58■■■□□ 2.01
RHBDD3-206ENST00000493894 CYP2C18P33260 490 aa27.58■■■□□ 2.01
RHBDD3-206ENST00000493894 TTLL4Q14679 1199 aa27.58■■■□□ 2.01
RHBDD3-206ENST00000493894 NSUN6Q8TEA1 469 aaKnown RBP27.58■■■□□ 2.01
RHBDD3-206ENST00000493894 AMNQ9BXJ7 453 aa27.58■■■□□ 2.01
RHBDD3-206ENST00000493894 TBC1D5Q92609 795 aa27.57■■■□□ 2
RHBDD3-206ENST00000493894 MTG1Q9BT17 334 aaPredicted RBP27.57■■■□□ 2
RHBDD3-206ENST00000493894 TRPV6Q9H1D0 765 aa27.57■■■□□ 2
RHBDD3-206ENST00000493894 ALDH8A1Q9H2A2 487 aaPredicted RBP27.57■■■□□ 2
RHBDD3-206ENST00000493894 SEMA6BQ9H3T3 888 aa27.57■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms