RNA–Protein interactions for RNA: ENST00000493792.1

TRAPPC12-222, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-222ENST00000493792 ITGB8P26012 769 aa12.09□□□□□ -0.47
TRAPPC12-222ENST00000493792 PSMA5P28066 241 aa12.09□□□□□ -0.47
TRAPPC12-222ENST00000493792 EPHB4P54760 987 aa12.09□□□□□ -0.47
TRAPPC12-222ENST00000493792 TROAPQ12815 778 aa12.09□□□□□ -0.47
TRAPPC12-222ENST00000493792 QRICH1Q2TAL8 776 aa12.09□□□□□ -0.47
TRAPPC12-222ENST00000493792 ZNF792Q3KQV3 632 aa12.09□□□□□ -0.47
TRAPPC12-222ENST00000493792 TSGA10IPQ3SY00 556 aa12.09□□□□□ -0.47
TRAPPC12-222ENST00000493792 PRAMEF19Q5SWL8 479 aa12.09□□□□□ -0.47
TRAPPC12-222ENST00000493792 GJC2Q5T442 439 aaPredicted RBP12.09□□□□□ -0.47
TRAPPC12-222ENST00000493792 MICU3Q86XE3 530 aa12.09□□□□□ -0.47
TRAPPC12-222ENST00000493792 FBXO11Q86XK2 927 aa12.09□□□□□ -0.47
TRAPPC12-222ENST00000493792 JMJD4Q9H9V9 463 aa12.09□□□□□ -0.47
TRAPPC12-222ENST00000493792 A1CFQ9NQ94 594 aaKnown RBP12.09□□□□□ -0.47
TRAPPC12-222ENST00000493792 PRKAG2Q9UGJ0 569 aa12.09□□□□□ -0.47
TRAPPC12-222ENST00000493792 CNPY2Q9Y2B0 182 aa12.09□□□□□ -0.47
TRAPPC12-222ENST00000493792 ATP11BQ9Y2G3 1177 aa12.09□□□□□ -0.47
TRAPPC12-222ENST00000493792 DIS3Q9Y2L1 958 aaKnown RBP12.09□□□□□ -0.47
TRAPPC12-222ENST00000493792 WDR19Q8NEZ3 1342 aa12.09□□□□□ -0.47
TRAPPC12-222ENST00000493792 TNFRSF10AO00220 468 aa12.08□□□□□ -0.48
TRAPPC12-222ENST00000493792 NFIBO00712 420 aa12.08□□□□□ -0.48
TRAPPC12-222ENST00000493792 CALM1P0DP23 149 aa12.08□□□□□ -0.48
TRAPPC12-222ENST00000493792 CALM2P0DP24 149 aa12.08□□□□□ -0.48
TRAPPC12-222ENST00000493792 CALM3P0DP25 149 aa12.08□□□□□ -0.48
TRAPPC12-222ENST00000493792 FOSL2P15408 326 aa12.08□□□□□ -0.48
TRAPPC12-222ENST00000493792 CASTP20810 708 aaKnown RBP12.08□□□□□ -0.48
TRAPPC12-222ENST00000493792 CALML3P27482 149 aa12.08□□□□□ -0.48
TRAPPC12-222ENST00000493792 LIFRP42702 1097 aa12.08□□□□□ -0.48
TRAPPC12-222ENST00000493792 GRIN2CQ14957 1233 aa12.08□□□□□ -0.48
TRAPPC12-222ENST00000493792 TJAP1Q5JTD0 557 aa12.08□□□□□ -0.48
TRAPPC12-222ENST00000493792 TINF2Q9BSI4 451 aa12.08□□□□□ -0.48
TRAPPC12-222ENST00000493792 USP26Q9BXU7 913 aa12.08□□□□□ -0.48
TRAPPC12-222ENST00000493792 CYP39A1Q9NYL5 469 aa12.08□□□□□ -0.48
TRAPPC12-222ENST00000493792 ZHX1Q9UKY1 873 aaPredicted RBP12.08□□□□□ -0.48
TRAPPC12-222ENST00000493792 ABCB11O95342 1321 aa12.08□□□□□ -0.48
TRAPPC12-222ENST00000493792 MYH6P13533 1939 aa12.07□□□□□ -0.48
TRAPPC12-222ENST00000493792 DNAJC25-GNG10A0A024R161 153 aa12.07□□□□□ -0.48
TRAPPC12-222ENST00000493792 KLF18A0A0U1RQI7 1052 aa12.07□□□□□ -0.48
TRAPPC12-222ENST00000493792 SEPT4O43236 478 aa12.07□□□□□ -0.48
TRAPPC12-222ENST00000493792 GNAQP50148 359 aa12.07□□□□□ -0.48
TRAPPC12-222ENST00000493792 EXOSC10Q01780 885 aaKnown RBP12.07□□□□□ -0.48
TRAPPC12-222ENST00000493792 BAATQ14032 418 aaPredicted RBP12.07□□□□□ -0.48
TRAPPC12-222ENST00000493792 TRIM60Q495X7 471 aa12.07□□□□□ -0.48
TRAPPC12-222ENST00000493792 C1orf53Q5VUE5 145 aa12.07□□□□□ -0.48
TRAPPC12-222ENST00000493792 ANO1Q5XXA6 986 aa12.07□□□□□ -0.48
TRAPPC12-222ENST00000493792 SLC30A10Q6XR72 485 aa12.07□□□□□ -0.48
TRAPPC12-222ENST00000493792 RNF207Q6ZRF8 634 aa12.07□□□□□ -0.48
TRAPPC12-222ENST00000493792 CCDC82Q8N4S0 544 aa12.07□□□□□ -0.48
TRAPPC12-222ENST00000493792 ARRDC4Q8NCT1 418 aa12.07□□□□□ -0.48
TRAPPC12-222ENST00000493792 KCNB2Q92953 911 aa12.07□□□□□ -0.48
TRAPPC12-222ENST00000493792 PIGSQ96S52 555 aa12.07□□□□□ -0.48
TRAPPC12-222ENST00000493792 AMNQ9BXJ7 453 aa12.07□□□□□ -0.48
TRAPPC12-222ENST00000493792 PDLIM7Q9NR12 457 aa12.07□□□□□ -0.48
TRAPPC12-222ENST00000493792 TMEM265A0A087WTH1 108 aa12.06□□□□□ -0.48
TRAPPC12-222ENST00000493792 ZBTB5O15062 677 aa12.06□□□□□ -0.48
TRAPPC12-222ENST00000493792 ZBTB43O43298 467 aa12.06□□□□□ -0.48
TRAPPC12-222ENST00000493792 EPB41L2O43491 1005 aaKnown RBP12.06□□□□□ -0.48
TRAPPC12-222ENST00000493792 EIF5BO60841 1220 aaKnown RBP12.06□□□□□ -0.48
TRAPPC12-222ENST00000493792 RPS6KB1P23443 525 aa12.06□□□□□ -0.48
TRAPPC12-222ENST00000493792 APOA5Q6Q788 366 aa12.06□□□□□ -0.48
TRAPPC12-222ENST00000493792 Q6ZUG5 572 aa12.06□□□□□ -0.48
TRAPPC12-222ENST00000493792 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.06□□□□□ -0.48
TRAPPC12-222ENST00000493792 CMTR1Q8N1G2 835 aaKnown RBP12.06□□□□□ -0.48
TRAPPC12-222ENST00000493792 CLEC4DQ8WXI8 215 aa12.06□□□□□ -0.48
TRAPPC12-222ENST00000493792 RRP36Q96EU6 259 aaKnown RBP12.06□□□□□ -0.48
TRAPPC12-222ENST00000493792 PURBQ96QR8 312 aaKnown RBP12.06□□□□□ -0.48
TRAPPC12-222ENST00000493792 MAP3K14Q99558 947 aa12.06□□□□□ -0.48
TRAPPC12-222ENST00000493792 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.06□□□□□ -0.48
TRAPPC12-222ENST00000493792 SEC63Q9UGP8 760 aaKnown RBP12.06□□□□□ -0.48
TRAPPC12-222ENST00000493792 NRBP1Q9UHY1 535 aa12.06□□□□□ -0.48
TRAPPC12-222ENST00000493792 MRPL11Q9Y3B7 192 aaKnown RBP12.06□□□□□ -0.48
TRAPPC12-222ENST00000493792 SMCHD1A6NHR9 2005 aa12.06□□□□□ -0.48
TRAPPC12-222ENST00000493792 SOWAHBA6NEL2 793 aa12.05□□□□□ -0.48
TRAPPC12-222ENST00000493792 ASB14A6NK59 587 aa12.05□□□□□ -0.48
TRAPPC12-222ENST00000493792 GOLGA8AA7E2F4 631 aa12.05□□□□□ -0.48
TRAPPC12-222ENST00000493792 GOLGA8BA8MQT2 603 aa12.05□□□□□ -0.48
TRAPPC12-222ENST00000493792 PLEKHA8P1O95397 391 aa12.05□□□□□ -0.48
TRAPPC12-222ENST00000493792 CFBP00751 764 aa12.05□□□□□ -0.48
TRAPPC12-222ENST00000493792 ADCYAP1R1P41586 468 aa12.05□□□□□ -0.48
TRAPPC12-222ENST00000493792 RPS6P62753 249 aaKnown RBP12.05□□□□□ -0.48
TRAPPC12-222ENST00000493792 TLE2Q04725 743 aa12.05□□□□□ -0.48
TRAPPC12-222ENST00000493792 APOBRQ0VD83 1088 aa12.05□□□□□ -0.48
TRAPPC12-222ENST00000493792 TRAF1Q13077 416 aa12.05□□□□□ -0.48
TRAPPC12-222ENST00000493792 ARMCX2Q7L311 632 aa12.05□□□□□ -0.48
TRAPPC12-222ENST00000493792 EEPD1Q7L9B9 569 aa12.05□□□□□ -0.48
TRAPPC12-222ENST00000493792 ZNF467Q7Z7K2 595 aaPredicted RBP12.05□□□□□ -0.48
TRAPPC12-222ENST00000493792 SGMS1Q86VZ5 419 aa12.05□□□□□ -0.48
TRAPPC12-222ENST00000493792 MCF2L2Q86YR7 1114 aa12.05□□□□□ -0.48
TRAPPC12-222ENST00000493792 MSL3Q8N5Y2 521 aaKnown RBP12.05□□□□□ -0.48
TRAPPC12-222ENST00000493792 FAM133AQ8N9E0 248 aa12.05□□□□□ -0.48
TRAPPC12-222ENST00000493792 FANCBQ8NB91 859 aa12.05□□□□□ -0.48
TRAPPC12-222ENST00000493792 BRF1Q92994 677 aa12.05□□□□□ -0.48
TRAPPC12-222ENST00000493792 LZTS2Q9BRK4 669 aa12.05□□□□□ -0.48
TRAPPC12-222ENST00000493792 RIOX1Q9H6W3 641 aa12.05□□□□□ -0.48
TRAPPC12-222ENST00000493792 PRDM5Q9NQX1 630 aaPredicted RBP12.05□□□□□ -0.48
TRAPPC12-222ENST00000493792 ADD3Q9UEY8 706 aaKnown RBP12.05□□□□□ -0.48
TRAPPC12-222ENST00000493792 BRPF3Q9ULD4 1205 aa12.05□□□□□ -0.48
TRAPPC12-222ENST00000493792 PCDHA1Q9Y5I3 950 aa12.05□□□□□ -0.48
TRAPPC12-222ENST00000493792 CYP46A1Q9Y6A2 500 aa12.05□□□□□ -0.48
TRAPPC12-222ENST00000493792 DDX49Q9Y6V7 483 aaKnown RBP12.05□□□□□ -0.48
TRAPPC12-222ENST00000493792 SYNGAP1Q96PV0 1343 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms